RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 SLC44A2Q8IWA5 706 aaPredicted RBP12.16□□□□□ -0.46
RAB11FIP3-207ENST00000461009 MCEMP1Q8IX19 187 aa12.16□□□□□ -0.46
RAB11FIP3-207ENST00000461009 PRR22Q8IZ63 422 aa12.16□□□□□ -0.46
RAB11FIP3-207ENST00000461009 FBXW8Q8N3Y1 598 aa12.16□□□□□ -0.46
RAB11FIP3-207ENST00000461009 GLB1L3Q8NCI6 653 aaPredicted RBP12.16□□□□□ -0.46
RAB11FIP3-207ENST00000461009 OR2M7Q8NG81 312 aa12.16□□□□□ -0.46
RAB11FIP3-207ENST00000461009 OR5M3Q8NGP4 307 aa12.16□□□□□ -0.46
RAB11FIP3-207ENST00000461009 PAQR8Q8TEZ7 354 aa12.16□□□□□ -0.46
RAB11FIP3-207ENST00000461009 MOAP1Q96BY2 351 aa12.16□□□□□ -0.46
RAB11FIP3-207ENST00000461009 TMCO6Q96DC7 493 aa12.16□□□□□ -0.46
RAB11FIP3-207ENST00000461009 OMA1Q96E52 524 aa12.16□□□□□ -0.46
RAB11FIP3-207ENST00000461009 VSTM2LQ96N03 204 aa12.16□□□□□ -0.46
RAB11FIP3-207ENST00000461009 PHF12Q96QT6 1004 aa12.16□□□□□ -0.46
RAB11FIP3-207ENST00000461009 CCDC28BQ9BUN5 200 aa12.16□□□□□ -0.46
RAB11FIP3-207ENST00000461009 DEFB127Q9H1M4 99 aa12.16□□□□□ -0.46
RAB11FIP3-207ENST00000461009 TP63Q9H3D4 680 aaPredicted RBP12.16□□□□□ -0.46
RAB11FIP3-207ENST00000461009 NEUROD4Q9HD90 331 aa12.16□□□□□ -0.46
RAB11FIP3-207ENST00000461009 Q9N2J8 555 aa12.16□□□□□ -0.46
RAB11FIP3-207ENST00000461009 TCF7L2Q9NQB0 619 aa12.16□□□□□ -0.46
RAB11FIP3-207ENST00000461009 AIG1Q9NVV5 245 aa12.16□□□□□ -0.46
RAB11FIP3-207ENST00000461009 DTX4Q9Y2E6 619 aa12.16□□□□□ -0.46
RAB11FIP3-207ENST00000461009 SNX8Q9Y5X2 465 aa12.16□□□□□ -0.46
RAB11FIP3-207ENST00000461009 GPR45Q9Y5Y3 372 aa12.16□□□□□ -0.46
RAB11FIP3-207ENST00000461009 CACNA1DQ01668 2161 aa12.16□□□□□ -0.46
RAB11FIP3-207ENST00000461009 E9PBE3 544 aa12.15□□□□□ -0.46
RAB11FIP3-207ENST00000461009 RNASET2O00584 256 aaKnown RBP12.15□□□□□ -0.46
RAB11FIP3-207ENST00000461009 SLC22A3O75751 556 aa12.15□□□□□ -0.46
RAB11FIP3-207ENST00000461009 C6orf47O95873 294 aa12.15□□□□□ -0.46
RAB11FIP3-207ENST00000461009 CT45A8P0DMV1 189 aa12.15□□□□□ -0.46
RAB11FIP3-207ENST00000461009 CT45A9P0DMV2 189 aa12.15□□□□□ -0.46
RAB11FIP3-207ENST00000461009 EFNA1P20827 205 aaPredicted RBP12.15□□□□□ -0.46
RAB11FIP3-207ENST00000461009 IL12BP29460 328 aa12.15□□□□□ -0.46
RAB11FIP3-207ENST00000461009 CCT3P49368 545 aaKnown RBP12.15□□□□□ -0.46
RAB11FIP3-207ENST00000461009 PRIM2P49643 509 aa12.15□□□□□ -0.46
RAB11FIP3-207ENST00000461009 CDK9P50750 372 aaKnown RBP12.15□□□□□ -0.46
RAB11FIP3-207ENST00000461009 PSMD4P55036 377 aaKnown RBP12.15□□□□□ -0.46
RAB11FIP3-207ENST00000461009 AQP5P55064 265 aa12.15□□□□□ -0.46
RAB11FIP3-207ENST00000461009 FBXW4P57775 412 aa12.15□□□□□ -0.46
RAB11FIP3-207ENST00000461009 STX1BP61266 288 aa12.15□□□□□ -0.46
RAB11FIP3-207ENST00000461009 UFM1P61960 85 aa12.15□□□□□ -0.46
RAB11FIP3-207ENST00000461009 IRX1P78414 480 aaPredicted RBP12.15□□□□□ -0.46
RAB11FIP3-207ENST00000461009 EFR3AQ14156 821 aa12.15□□□□□ -0.46
RAB11FIP3-207ENST00000461009 NNATQ16517 81 aa12.15□□□□□ -0.46
RAB11FIP3-207ENST00000461009 PDCD4Q53EL6 469 aaKnown RBP12.15□□□□□ -0.46
RAB11FIP3-207ENST00000461009 CT45A2Q5DJT8 189 aa12.15□□□□□ -0.46
RAB11FIP3-207ENST00000461009 CMPK2Q5EBM0 449 aa12.15□□□□□ -0.46
RAB11FIP3-207ENST00000461009 TMEM198Q66K66 360 aa12.15□□□□□ -0.46
RAB11FIP3-207ENST00000461009 OR4F3Q6IEY1 312 aa12.15□□□□□ -0.46
RAB11FIP3-207ENST00000461009 MAVSQ7Z434 540 aa12.15□□□□□ -0.46
RAB11FIP3-207ENST00000461009 GDF7Q7Z4P5 450 aa12.15□□□□□ -0.46
RAB11FIP3-207ENST00000461009 CD163Q86VB7 1156 aa12.15□□□□□ -0.46
RAB11FIP3-207ENST00000461009 CDRT4Q8N9R6 151 aa12.15□□□□□ -0.46
RAB11FIP3-207ENST00000461009 OR10G3Q8NGC4 313 aa12.15□□□□□ -0.46
RAB11FIP3-207ENST00000461009 OR56A1Q8NGH5 318 aa12.15□□□□□ -0.46
RAB11FIP3-207ENST00000461009 OR52N2Q8NGI0 321 aa12.15□□□□□ -0.46
RAB11FIP3-207ENST00000461009 DIO2Q92813 273 aa12.15□□□□□ -0.46
RAB11FIP3-207ENST00000461009 OR52B2Q96RD2 323 aa12.15□□□□□ -0.46
RAB11FIP3-207ENST00000461009 SIKE1Q9BRV8 207 aa12.15□□□□□ -0.46
RAB11FIP3-207ENST00000461009 LMF2Q9BU23 707 aaKnown RBP12.15□□□□□ -0.46
RAB11FIP3-207ENST00000461009 IL1RL2Q9HB29 575 aa12.15□□□□□ -0.46
RAB11FIP3-207ENST00000461009 SH2D2AQ9NP31 389 aa12.15□□□□□ -0.46
RAB11FIP3-207ENST00000461009 EQTNQ9NQ60 294 aa12.15□□□□□ -0.46
RAB11FIP3-207ENST00000461009 ZCCHC3Q9NUD5 404 aaKnown RBP12.15□□□□□ -0.46
RAB11FIP3-207ENST00000461009 FAM120CQ9NX05 1096 aaKnown RBP12.15□□□□□ -0.46
RAB11FIP3-207ENST00000461009 CBLCQ9ULV8 474 aa12.15□□□□□ -0.46
RAB11FIP3-207ENST00000461009 CHCHD2Q9Y6H1 151 aaPredicted RBP12.15□□□□□ -0.46
RAB11FIP3-207ENST00000461009 UNC79Q9P2D8 2635 aa12.14□□□□□ -0.47
RAB11FIP3-207ENST00000461009 ANKRD33BA6NCL7 494 aa12.14□□□□□ -0.47
RAB11FIP3-207ENST00000461009 OR14I1A6ND48 311 aa12.14□□□□□ -0.47
RAB11FIP3-207ENST00000461009 OR6C70A6NIJ9 312 aa12.14□□□□□ -0.47
RAB11FIP3-207ENST00000461009 FAM166BA8MTA8 275 aa12.14□□□□□ -0.47
RAB11FIP3-207ENST00000461009 DYNC1I1O14576 645 aa12.14□□□□□ -0.47
RAB11FIP3-207ENST00000461009 BCKDKO14874 412 aa12.14□□□□□ -0.47
RAB11FIP3-207ENST00000461009 ANKRD28O15084 1053 aa12.14□□□□□ -0.47
RAB11FIP3-207ENST00000461009 EDF1O60869 148 aaKnown RBP12.14□□□□□ -0.47
RAB11FIP3-207ENST00000461009 SNX4O95219 450 aa12.14□□□□□ -0.47
RAB11FIP3-207ENST00000461009 PSMG1O95456 288 aa12.14□□□□□ -0.47
RAB11FIP3-207ENST00000461009 IL6P05231 212 aa12.14□□□□□ -0.47
RAB11FIP3-207ENST00000461009 KRT16P08779 473 aa12.14□□□□□ -0.47
RAB11FIP3-207ENST00000461009 CCL3P10147 92 aa12.14□□□□□ -0.47
RAB11FIP3-207ENST00000461009 GABRA3P34903 492 aa12.14□□□□□ -0.47
RAB11FIP3-207ENST00000461009 IDH3AP50213 366 aa12.14□□□□□ -0.47
RAB11FIP3-207ENST00000461009 PNLIPRP2P54317 469 aa12.14□□□□□ -0.47
RAB11FIP3-207ENST00000461009 NME5P56597 212 aa12.14□□□□□ -0.47
RAB11FIP3-207ENST00000461009 CORO7P57737 925 aa12.14□□□□□ -0.47
RAB11FIP3-207ENST00000461009 SNTA1Q13424 505 aa12.14□□□□□ -0.47
RAB11FIP3-207ENST00000461009 SLC10A1Q14973 349 aa12.14□□□□□ -0.47
RAB11FIP3-207ENST00000461009 DECR1Q16698 335 aa12.14□□□□□ -0.47
RAB11FIP3-207ENST00000461009 FAM174BQ3ZCQ3 159 aa12.14□□□□□ -0.47
RAB11FIP3-207ENST00000461009 PACS2Q86VP3 889 aa12.14□□□□□ -0.47
RAB11FIP3-207ENST00000461009 MIER2Q8N344 545 aa12.14□□□□□ -0.47
RAB11FIP3-207ENST00000461009 FAM109AQ8N4B1 249 aa12.14□□□□□ -0.47
RAB11FIP3-207ENST00000461009 PSMA8Q8TAA3 256 aa12.14□□□□□ -0.47
RAB11FIP3-207ENST00000461009 SPPL2AQ8TCT8 520 aa12.14□□□□□ -0.47
RAB11FIP3-207ENST00000461009 SFXN5Q8TD22 340 aa12.14□□□□□ -0.47
RAB11FIP3-207ENST00000461009 NUDT8Q8WV74 236 aa12.14□□□□□ -0.47
RAB11FIP3-207ENST00000461009 ASB5Q8WWX0 329 aa12.14□□□□□ -0.47
RAB11FIP3-207ENST00000461009 STON2Q8WXE9 905 aa12.14□□□□□ -0.47
RAB11FIP3-207ENST00000461009 SLC9A6Q92581 669 aa12.14□□□□□ -0.47
RAB11FIP3-207ENST00000461009 TMBIM1Q969X1 311 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms