RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 CBLCQ9ULV8 474 aa12.87□□□□□ -0.35
HDLBP-229ENST00000460826 OR10H1Q9Y4A9 318 aa12.87□□□□□ -0.35
HDLBP-229ENST00000460826 KCNE3Q9Y6H6 103 aa12.87□□□□□ -0.35
HDLBP-229ENST00000460826 TTC36A6NLP5 189 aa12.86□□□□□ -0.35
HDLBP-229ENST00000460826 TTLL8A6PVC2 850 aa12.86□□□□□ -0.35
HDLBP-229ENST00000460826 RFXANKO14593 260 aa12.86□□□□□ -0.35
HDLBP-229ENST00000460826 PEX1O43933 1283 aa12.86□□□□□ -0.35
HDLBP-229ENST00000460826 SNX3O60493 162 aa12.86□□□□□ -0.35
HDLBP-229ENST00000460826 ALOX5P09917 674 aa12.86□□□□□ -0.35
HDLBP-229ENST00000460826 NAGAP17050 411 aa12.86□□□□□ -0.35
HDLBP-229ENST00000460826 HOXB9P17482 250 aaPredicted RBP12.86□□□□□ -0.35
HDLBP-229ENST00000460826 PIGAP37287 484 aa12.86□□□□□ -0.35
HDLBP-229ENST00000460826 RFC3P40938 356 aa12.86□□□□□ -0.35
HDLBP-229ENST00000460826 DNASE1L1P49184 302 aa12.86□□□□□ -0.35
HDLBP-229ENST00000460826 TMED10P49755 219 aaKnown RBP12.86□□□□□ -0.35
HDLBP-229ENST00000460826 MEOX1P50221 254 aa12.86□□□□□ -0.35
HDLBP-229ENST00000460826 LRRC74AQ0VAA2 488 aa12.86□□□□□ -0.35
HDLBP-229ENST00000460826 KLF10Q13118 480 aa12.86□□□□□ -0.35
HDLBP-229ENST00000460826 INPP5JQ15735 1006 aaPredicted RBP12.86□□□□□ -0.35
HDLBP-229ENST00000460826 CYP27C1Q4G0S4 372 aa12.86□□□□□ -0.35
HDLBP-229ENST00000460826 ZCCHC12Q6PEW1 402 aa12.86□□□□□ -0.35
HDLBP-229ENST00000460826 ZNF621Q6ZSS3 439 aa12.86□□□□□ -0.35
HDLBP-229ENST00000460826 PRICKLE2Q7Z3G6 844 aa12.86□□□□□ -0.35
HDLBP-229ENST00000460826 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.86□□□□□ -0.35
HDLBP-229ENST00000460826 CPLX4Q7Z7G2 160 aa12.86□□□□□ -0.35
HDLBP-229ENST00000460826 GALNT10Q86SR1 603 aa12.86□□□□□ -0.35
HDLBP-229ENST00000460826 SULF2Q8IWU5 870 aa12.86□□□□□ -0.35
HDLBP-229ENST00000460826 DND1Q8IYX4 353 aaKnown RBP12.86□□□□□ -0.35
HDLBP-229ENST00000460826 OR5D16Q8NGK9 328 aa12.86□□□□□ -0.35
HDLBP-229ENST00000460826 SPPL2AQ8TCT8 520 aa12.86□□□□□ -0.35
HDLBP-229ENST00000460826 CDS1Q92903 461 aa12.86□□□□□ -0.35
HDLBP-229ENST00000460826 SNRNP40Q96DI7 357 aaKnown RBP12.86□□□□□ -0.35
HDLBP-229ENST00000460826 NEURL3Q96EH8 262 aa12.86□□□□□ -0.35
HDLBP-229ENST00000460826 RMND5BQ96G75 393 aaPredicted RBP12.86□□□□□ -0.35
HDLBP-229ENST00000460826 ITCHQ96J02 903 aa12.86□□□□□ -0.35
HDLBP-229ENST00000460826 OR7D2Q96RA2 312 aa12.86□□□□□ -0.35
HDLBP-229ENST00000460826 ADOQ96SZ5 270 aa12.86□□□□□ -0.35
HDLBP-229ENST00000460826 NMUR2Q9GZQ4 415 aa12.86□□□□□ -0.35
HDLBP-229ENST00000460826 PAIP1Q9H074 479 aaKnown RBP12.86□□□□□ -0.35
HDLBP-229ENST00000460826 NSRP1Q9H0G5 558 aaKnown RBP12.86□□□□□ -0.35
HDLBP-229ENST00000460826 RMND5AQ9H871 391 aa12.86□□□□□ -0.35
HDLBP-229ENST00000460826 SACM1LQ9NTJ5 587 aa12.86□□□□□ -0.35
HDLBP-229ENST00000460826 TMEM45AQ9NWC5 275 aa12.86□□□□□ -0.35
HDLBP-229ENST00000460826 FBXO34Q9NWN3 711 aa12.86□□□□□ -0.35
HDLBP-229ENST00000460826 VPS4AQ9UN37 437 aa12.86□□□□□ -0.35
HDLBP-229ENST00000460826 KLF13Q9Y2Y9 288 aaPredicted RBP12.86□□□□□ -0.35
HDLBP-229ENST00000460826 OR6C70A6NIJ9 312 aa12.85□□□□□ -0.35
HDLBP-229ENST00000460826 CAPN14A8MX76 684 aa12.85□□□□□ -0.35
HDLBP-229ENST00000460826 TP53I11O14683 189 aa12.85□□□□□ -0.35
HDLBP-229ENST00000460826 CYP4B1P13584 511 aa12.85□□□□□ -0.35
HDLBP-229ENST00000460826 MATN1P21941 496 aa12.85□□□□□ -0.35
HDLBP-229ENST00000460826 CHI3L1P36222 383 aaPredicted RBP12.85□□□□□ -0.35
HDLBP-229ENST00000460826 RFX3P48380 749 aa12.85□□□□□ -0.35
HDLBP-229ENST00000460826 TRPC1P48995 793 aa12.85□□□□□ -0.35
HDLBP-229ENST00000460826 MRPS22P82650 360 aaKnown RBP12.85□□□□□ -0.35
HDLBP-229ENST00000460826 RNFT1Q5M7Z0 435 aa12.85□□□□□ -0.35
HDLBP-229ENST00000460826 C6orf10Q5SRN2 563 aa12.85□□□□□ -0.35
HDLBP-229ENST00000460826 CCNJQ5T5M9 372 aa12.85□□□□□ -0.35
HDLBP-229ENST00000460826 SLC22A10Q63ZE4 541 aa12.85□□□□□ -0.35
HDLBP-229ENST00000460826 NUP54Q7Z3B4 507 aa12.85□□□□□ -0.35
HDLBP-229ENST00000460826 ZAR1Q86SH2 424 aa12.85□□□□□ -0.35
HDLBP-229ENST00000460826 RETREG3Q86VR2 466 aa12.85□□□□□ -0.35
HDLBP-229ENST00000460826 MSRB3Q8IXL7 192 aa12.85□□□□□ -0.35
HDLBP-229ENST00000460826 FBXW8Q8N3Y1 598 aa12.85□□□□□ -0.35
HDLBP-229ENST00000460826 COX18Q8N8Q8 333 aa12.85□□□□□ -0.35
HDLBP-229ENST00000460826 OR2M7Q8NG81 312 aa12.85□□□□□ -0.35
HDLBP-229ENST00000460826 ADAMTS15Q8TE58 950 aa12.85□□□□□ -0.35
HDLBP-229ENST00000460826 GRHL3Q8TE85 626 aa12.85□□□□□ -0.35
HDLBP-229ENST00000460826 ZFP90Q8TF47 636 aa12.85□□□□□ -0.35
HDLBP-229ENST00000460826 DIO2Q92813 273 aa12.85□□□□□ -0.35
HDLBP-229ENST00000460826 AURKBQ96GD4 344 aaPredicted RBP12.85□□□□□ -0.35
HDLBP-229ENST00000460826 COL21A1Q96P44 957 aa12.85□□□□□ -0.35
HDLBP-229ENST00000460826 PHF12Q96QT6 1004 aa12.85□□□□□ -0.35
HDLBP-229ENST00000460826 STACQ99469 402 aa12.85□□□□□ -0.35
HDLBP-229ENST00000460826 OR51I1Q9H343 314 aa12.85□□□□□ -0.35
HDLBP-229ENST00000460826 PIGUQ9H490 435 aa12.85□□□□□ -0.35
HDLBP-229ENST00000460826 DUSP22Q9NRW4 184 aa12.85□□□□□ -0.35
HDLBP-229ENST00000460826 RYDENQ9NUL5 291 aaKnown RBP12.85□□□□□ -0.35
HDLBP-229ENST00000460826 ASF1BQ9NVP2 202 aa12.85□□□□□ -0.35
HDLBP-229ENST00000460826 FLRT3Q9NZU0 649 aa12.85□□□□□ -0.35
HDLBP-229ENST00000460826 SLAMF8Q9P0V8 285 aa12.85□□□□□ -0.35
HDLBP-229ENST00000460826 ARMCX1Q9P291 453 aa12.85□□□□□ -0.35
HDLBP-229ENST00000460826 FAF1Q9UNN5 650 aaPredicted RBP12.85□□□□□ -0.35
HDLBP-229ENST00000460826 GTF3C1Q12789 2109 aa12.85□□□□□ -0.35
HDLBP-229ENST00000460826 A0A1W2PP18 115 aa12.84□□□□□ -0.35
HDLBP-229ENST00000460826 WISP2O76076 250 aa12.84□□□□□ -0.35
HDLBP-229ENST00000460826 KCNK2O95069 426 aa12.84□□□□□ -0.35
HDLBP-229ENST00000460826 RASAL1O95294 804 aa12.84□□□□□ -0.35
HDLBP-229ENST00000460826 IL33O95760 270 aa12.84□□□□□ -0.35
HDLBP-229ENST00000460826 P04436 131 aa12.84□□□□□ -0.35
HDLBP-229ENST00000460826 ZCCHC18P0CG32 403 aa12.84□□□□□ -0.35
HDLBP-229ENST00000460826 CNR1P21554 472 aa12.84□□□□□ -0.35
HDLBP-229ENST00000460826 IL12BP29460 328 aa12.84□□□□□ -0.35
HDLBP-229ENST00000460826 KRT20P35900 424 aa12.84□□□□□ -0.35
HDLBP-229ENST00000460826 PTGDSP41222 190 aa12.84□□□□□ -0.35
HDLBP-229ENST00000460826 CASP3P42574 277 aa12.84□□□□□ -0.35
HDLBP-229ENST00000460826 PNLIPRP2P54317 469 aa12.84□□□□□ -0.35
HDLBP-229ENST00000460826 PSPHP78330 225 aa12.84□□□□□ -0.35
HDLBP-229ENST00000460826 TLE1Q04724 770 aa12.84□□□□□ -0.35
HDLBP-229ENST00000460826 C19orf57Q0VDD7 668 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms