RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 CBX7O95931 251 aa12.94□□□□□ -0.34
UPF3AP2-201ENST00000457924 GSTA2P09210 222 aa12.94□□□□□ -0.34
UPF3AP2-201ENST00000457924 PAX1P15863 534 aa12.94□□□□□ -0.34
UPF3AP2-201ENST00000457924 CCKARP32238 428 aa12.94□□□□□ -0.34
UPF3AP2-201ENST00000457924 KIR2DL2P43627 348 aaPredicted RBP12.94□□□□□ -0.34
UPF3AP2-201ENST00000457924 GPX6P59796 221 aa12.94□□□□□ -0.34
UPF3AP2-201ENST00000457924 CALCOCO2Q13137 446 aa12.94□□□□□ -0.34
UPF3AP2-201ENST00000457924 FGFBP1Q14512 234 aa12.94□□□□□ -0.34
UPF3AP2-201ENST00000457924 FAM83EQ2M2I3 478 aa12.94□□□□□ -0.34
UPF3AP2-201ENST00000457924 TRMT12Q53H54 448 aaKnown RBP12.94□□□□□ -0.34
UPF3AP2-201ENST00000457924 TTC19Q6DKK2 380 aaPredicted RBP12.94□□□□□ -0.34
UPF3AP2-201ENST00000457924 PPM1NQ8N819 430 aa12.94□□□□□ -0.34
UPF3AP2-201ENST00000457924 TRPC4APQ8TEL6 797 aa12.94□□□□□ -0.34
UPF3AP2-201ENST00000457924 KCTD4Q8WVF5 259 aa12.94□□□□□ -0.34
UPF3AP2-201ENST00000457924 CAVIN3Q969G5 261 aa12.94□□□□□ -0.34
UPF3AP2-201ENST00000457924 SLC35A4Q96G79 324 aa12.94□□□□□ -0.34
UPF3AP2-201ENST00000457924 ADOQ96SZ5 270 aa12.94□□□□□ -0.34
UPF3AP2-201ENST00000457924 MRPL1Q9BYD6 325 aaKnown RBP12.94□□□□□ -0.34
UPF3AP2-201ENST00000457924 HEY2Q9UBP5 337 aa12.94□□□□□ -0.34
UPF3AP2-201ENST00000457924 CES1P1Q9UKY3 287 aa12.94□□□□□ -0.34
UPF3AP2-201ENST00000457924 PSME2Q9UL46 239 aa12.94□□□□□ -0.34
UPF3AP2-201ENST00000457924 PROCRQ9UNN8 238 aa12.94□□□□□ -0.34
UPF3AP2-201ENST00000457924 GPR55Q9Y2T6 319 aaPredicted RBP12.94□□□□□ -0.34
UPF3AP2-201ENST00000457924 ZSCAN12O43309 604 aa12.93□□□□□ -0.34
UPF3AP2-201ENST00000457924 TMCC2O75069 709 aa12.93□□□□□ -0.34
UPF3AP2-201ENST00000457924 BCAS2O75934 225 aaPredicted RBP12.93□□□□□ -0.34
UPF3AP2-201ENST00000457924 CGAP01215 116 aa12.93□□□□□ -0.34
UPF3AP2-201ENST00000457924 CD8BP10966 210 aa12.93□□□□□ -0.34
UPF3AP2-201ENST00000457924 GRK2P25098 689 aa12.93□□□□□ -0.34
UPF3AP2-201ENST00000457924 LOXP28300 417 aaPredicted RBP12.93□□□□□ -0.34
UPF3AP2-201ENST00000457924 KRT20P35900 424 aa12.93□□□□□ -0.34
UPF3AP2-201ENST00000457924 EMDP50402 254 aa12.93□□□□□ -0.34
UPF3AP2-201ENST00000457924 ATP5J2P56134 94 aa12.93□□□□□ -0.34
UPF3AP2-201ENST00000457924 DSCR4P56555 118 aaPredicted RBP12.93□□□□□ -0.34
UPF3AP2-201ENST00000457924 IFT88Q13099 833 aa12.93□□□□□ -0.34
UPF3AP2-201ENST00000457924 EFR3AQ14156 821 aa12.93□□□□□ -0.34
UPF3AP2-201ENST00000457924 ACAP2Q15057 778 aa12.93□□□□□ -0.34
UPF3AP2-201ENST00000457924 OCLNQ16625 522 aa12.93□□□□□ -0.34
UPF3AP2-201ENST00000457924 BEX5Q5H9J7 111 aa12.93□□□□□ -0.34
UPF3AP2-201ENST00000457924 C10orf62Q5T681 223 aaPredicted RBP12.93□□□□□ -0.34
UPF3AP2-201ENST00000457924 FRG2Q64ET8 278 aa12.93□□□□□ -0.34
UPF3AP2-201ENST00000457924 METTL2BQ6P1Q9 378 aaKnown RBP12.93□□□□□ -0.34
UPF3AP2-201ENST00000457924 CCDC91Q7Z6B0 441 aa12.93□□□□□ -0.34
UPF3AP2-201ENST00000457924 CREG2Q8IUH2 290 aa12.93□□□□□ -0.34
UPF3AP2-201ENST00000457924 ZNF610Q8N9Z0 462 aa12.93□□□□□ -0.34
UPF3AP2-201ENST00000457924 OR4K17Q8NGC6 315 aa12.93□□□□□ -0.34
UPF3AP2-201ENST00000457924 FIG4Q92562 907 aa12.93□□□□□ -0.34
UPF3AP2-201ENST00000457924 KLHL29Q96CT2 875 aa12.93□□□□□ -0.34
UPF3AP2-201ENST00000457924 FRG2BQ96QU4 278 aa12.93□□□□□ -0.34
UPF3AP2-201ENST00000457924 PINK1Q9BXM7 581 aa12.93□□□□□ -0.34
UPF3AP2-201ENST00000457924 KLHL4Q9C0H6 718 aa12.93□□□□□ -0.34
UPF3AP2-201ENST00000457924 NOL11Q9H8H0 719 aaKnown RBP12.93□□□□□ -0.34
UPF3AP2-201ENST00000457924 CPSF2Q9P2I0 782 aaKnown RBP12.93□□□□□ -0.34
UPF3AP2-201ENST00000457924 ZNF780BQ9Y6R6 833 aa12.93□□□□□ -0.34
UPF3AP2-201ENST00000457924 ATRQ13535 2644 aa12.92□□□□□ -0.34
UPF3AP2-201ENST00000457924 USF3Q68DE3 2245 aa12.92□□□□□ -0.34
UPF3AP2-201ENST00000457924 ZANQ9Y493 2812 aa12.92□□□□□ -0.34
UPF3AP2-201ENST00000457924 TNFRSF21O75509 655 aa12.92□□□□□ -0.34
UPF3AP2-201ENST00000457924 SIX3O95343 332 aaPredicted RBP12.92□□□□□ -0.34
UPF3AP2-201ENST00000457924 ROS1P08922 2347 aa12.92□□□□□ -0.34
UPF3AP2-201ENST00000457924 PCSK2P16519 638 aa12.92□□□□□ -0.34
UPF3AP2-201ENST00000457924 TBXA2RP21731 343 aa12.92□□□□□ -0.34
UPF3AP2-201ENST00000457924 IL12BP29460 328 aa12.92□□□□□ -0.34
UPF3AP2-201ENST00000457924 CCNG1P51959 295 aa12.92□□□□□ -0.34
UPF3AP2-201ENST00000457924 B3GALT5-AS1P59052 145 aa12.92□□□□□ -0.34
UPF3AP2-201ENST00000457924 PSPHP78330 225 aa12.92□□□□□ -0.34
UPF3AP2-201ENST00000457924 MRPS35P82673 323 aaKnown RBP12.92□□□□□ -0.34
UPF3AP2-201ENST00000457924 IRF9Q00978 393 aa12.92□□□□□ -0.34
UPF3AP2-201ENST00000457924 DMTNQ08495 405 aa12.92□□□□□ -0.34
UPF3AP2-201ENST00000457924 LTB4RQ15722 352 aa12.92□□□□□ -0.34
UPF3AP2-201ENST00000457924 ANKRD34AQ69YU3 496 aa12.92□□□□□ -0.34
UPF3AP2-201ENST00000457924 KLC3Q6P597 504 aa12.92□□□□□ -0.34
UPF3AP2-201ENST00000457924 ZNF704Q6ZNC4 412 aaPredicted RBP12.92□□□□□ -0.34
UPF3AP2-201ENST00000457924 C22orf34Q6ZV56 151 aa12.92□□□□□ -0.34
UPF3AP2-201ENST00000457924 LARP4Q71RC2 724 aaKnown RBP eCLIP12.92□□□□□ -0.34
UPF3AP2-201ENST00000457924 COMMD6Q7Z4G1 85 aa12.92□□□□□ -0.34
UPF3AP2-201ENST00000457924 CENPLQ8N0S6 344 aaPredicted RBP12.92□□□□□ -0.34
UPF3AP2-201ENST00000457924 METTL4Q8N3J2 472 aa12.92□□□□□ -0.34
UPF3AP2-201ENST00000457924 OR52B6Q8NGF0 335 aa12.92□□□□□ -0.34
UPF3AP2-201ENST00000457924 IGFBPL1Q8WX77 278 aa12.92□□□□□ -0.34
UPF3AP2-201ENST00000457924 FAIM2Q9BWQ8 316 aa12.92□□□□□ -0.34
UPF3AP2-201ENST00000457924 RNF122Q9H9V4 155 aa12.92□□□□□ -0.34
UPF3AP2-201ENST00000457924 ZNF701Q9NV72 531 aaPredicted RBP12.92□□□□□ -0.34
UPF3AP2-201ENST00000457924 PPP4R1LQ9P1A2 415 aa12.92□□□□□ -0.34
UPF3AP2-201ENST00000457924 UQCRHLA0A096LP55 91 aa12.91□□□□□ -0.34
UPF3AP2-201ENST00000457924 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.91□□□□□ -0.34
UPF3AP2-201ENST00000457924 RNF212BA8MTL3 300 aa12.91□□□□□ -0.34
UPF3AP2-201ENST00000457924 OR7A17O14581 309 aa12.91□□□□□ -0.34
UPF3AP2-201ENST00000457924 SEC14L5O43304 696 aa12.91□□□□□ -0.34
UPF3AP2-201ENST00000457924 TSPAN2O60636 221 aa12.91□□□□□ -0.34
UPF3AP2-201ENST00000457924 C2P06681 752 aa12.91□□□□□ -0.34
UPF3AP2-201ENST00000457924 NID1P14543 1247 aa12.91□□□□□ -0.34
UPF3AP2-201ENST00000457924 PPP3CBP16298 524 aa12.91□□□□□ -0.34
UPF3AP2-201ENST00000457924 HK1P19367 917 aa12.91□□□□□ -0.34
UPF3AP2-201ENST00000457924 STX2P32856 288 aa12.91□□□□□ -0.34
UPF3AP2-201ENST00000457924 ALDH9A1P49189 494 aa12.91□□□□□ -0.34
UPF3AP2-201ENST00000457924 NR1H2P55055 460 aa12.91□□□□□ -0.34
UPF3AP2-201ENST00000457924 MRPS22P82650 360 aaKnown RBP12.91□□□□□ -0.34
UPF3AP2-201ENST00000457924 TNK1Q13470 666 aa12.91□□□□□ -0.34
UPF3AP2-201ENST00000457924 EXOC3L2Q2M3D2 409 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms