RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 MKLN1Q9UL63 735 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 CDC14AQ9UNH5 594 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 SATB2Q9UPW6 733 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 CORO2BQ9UQ03 480 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 ANGPT4Q9Y264 503 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 AP3M1Q9Y2T2 418 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 PCDHGB5Q9Y5G0 923 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 RIF1Q5UIP0 2472 aaKnown RBP8.1□□□□□ -1.11
RIF1-208ENST00000457745 CEP250Q9BV73 2442 aa8.1□□□□□ -1.11
RIF1-208ENST00000457745 ZNF292O60281 2723 aa8.09□□□□□ -1.11
RIF1-208ENST00000457745 CDC14CA4D256 554 aa8.09□□□□□ -1.11
RIF1-208ENST00000457745 TMEM200CA6NKL6 621 aa8.09□□□□□ -1.11
RIF1-208ENST00000457745 B4DXG7 233 aa8.09□□□□□ -1.11
RIF1-208ENST00000457745 TERTO14746 1132 aaKnown RBP8.09□□□□□ -1.11
RIF1-208ENST00000457745 MAN1A2O60476 641 aa8.09□□□□□ -1.11
RIF1-208ENST00000457745 STK17BO94768 372 aa8.09□□□□□ -1.11
RIF1-208ENST00000457745 SEC24DO94855 1032 aaPredicted RBP8.09□□□□□ -1.11
RIF1-208ENST00000457745 KCNK2O95069 426 aa8.09□□□□□ -1.11
RIF1-208ENST00000457745 WISP1O95388 367 aa8.09□□□□□ -1.11
RIF1-208ENST00000457745 RAP2AP10114 183 aa8.09□□□□□ -1.11
RIF1-208ENST00000457745 NR2F1P10589 423 aa8.09□□□□□ -1.11
RIF1-208ENST00000457745 PRG2P13727 222 aa8.09□□□□□ -1.11
RIF1-208ENST00000457745 ZNF26P17031 533 aaPredicted RBP8.09□□□□□ -1.11
RIF1-208ENST00000457745 RPS4Y1P22090 263 aaKnown RBP8.09□□□□□ -1.11
RIF1-208ENST00000457745 PSMA4P25789 261 aaKnown RBP8.09□□□□□ -1.11
RIF1-208ENST00000457745 GABRA3P34903 492 aa8.09□□□□□ -1.11
RIF1-208ENST00000457745 KCNJ5P48544 419 aa8.09□□□□□ -1.11
RIF1-208ENST00000457745 PRR5P85299 388 aa8.09□□□□□ -1.11
RIF1-208ENST00000457745 NHLH1Q02575 133 aa8.09□□□□□ -1.11
RIF1-208ENST00000457745 GK3PQ14409 553 aa8.09□□□□□ -1.11
RIF1-208ENST00000457745 IL11RAQ14626 422 aa8.09□□□□□ -1.11
RIF1-208ENST00000457745 PCOLCEQ15113 449 aa8.09□□□□□ -1.11
RIF1-208ENST00000457745 NSDHLQ15738 373 aa8.09□□□□□ -1.11
RIF1-208ENST00000457745 GPAT3Q53EU6 434 aa8.09□□□□□ -1.11
RIF1-208ENST00000457745 DCST2Q5T1A1 773 aa8.09□□□□□ -1.11
RIF1-208ENST00000457745 ZFP1Q6P2D0 407 aa8.09□□□□□ -1.11
RIF1-208ENST00000457745 ZNF836Q6ZNA1 936 aa8.09□□□□□ -1.11
RIF1-208ENST00000457745 ZDHHC21Q8IVQ6 265 aa8.09□□□□□ -1.11
RIF1-208ENST00000457745 PRR22Q8IZ63 422 aa8.09□□□□□ -1.11
RIF1-208ENST00000457745 ZNF441Q8N8Z8 693 aa8.09□□□□□ -1.11
RIF1-208ENST00000457745 GOLM1Q8NBJ4 401 aa8.09□□□□□ -1.11
RIF1-208ENST00000457745 ICA1LQ8NDH6 482 aa8.09□□□□□ -1.11
RIF1-208ENST00000457745 CHDHQ8NE62 594 aaPredicted RBP8.09□□□□□ -1.11
RIF1-208ENST00000457745 VANGL1Q8TAA9 524 aaPredicted RBP8.09□□□□□ -1.11
RIF1-208ENST00000457745 CT55Q8WUE5 264 aa8.09□□□□□ -1.11
RIF1-208ENST00000457745 MR1Q95460 341 aa8.09□□□□□ -1.11
RIF1-208ENST00000457745 TMBIM1Q969X1 311 aa8.09□□□□□ -1.11
RIF1-208ENST00000457745 ADIPOR1Q96A54 375 aa8.09□□□□□ -1.11
RIF1-208ENST00000457745 MOAP1Q96BY2 351 aa8.09□□□□□ -1.11
RIF1-208ENST00000457745 RMND5BQ96G75 393 aaPredicted RBP8.09□□□□□ -1.11
RIF1-208ENST00000457745 LIN37Q96GY3 246 aaPredicted RBP8.09□□□□□ -1.11
RIF1-208ENST00000457745 NAF1Q96HR8 494 aaKnown RBP8.09□□□□□ -1.11
RIF1-208ENST00000457745 SDF2Q99470 211 aa8.09□□□□□ -1.11
RIF1-208ENST00000457745 CDC6Q99741 560 aa8.09□□□□□ -1.11
RIF1-208ENST00000457745 CIB1Q99828 191 aa8.09□□□□□ -1.11
RIF1-208ENST00000457745 TRIM15Q9C019 465 aa8.09□□□□□ -1.11
RIF1-208ENST00000457745 ZNF350Q9GZX5 532 aa8.09□□□□□ -1.11
RIF1-208ENST00000457745 NXF5Q9H1B4 397 aaKnown RBP8.09□□□□□ -1.11
RIF1-208ENST00000457745 SLC26A1Q9H2B4 701 aa8.09□□□□□ -1.11
RIF1-208ENST00000457745 RAD21L1Q9H4I0 556 aa8.09□□□□□ -1.11
RIF1-208ENST00000457745 BCL2L10Q9HD36 194 aa8.09□□□□□ -1.11
RIF1-208ENST00000457745 RLIMQ9NVW2 624 aa8.09□□□□□ -1.11
RIF1-208ENST00000457745 DLL3Q9NYJ7 618 aa8.09□□□□□ -1.11
RIF1-208ENST00000457745 NDUFAF4Q9P032 175 aa8.09□□□□□ -1.11
RIF1-208ENST00000457745 IFT80Q9P2H3 777 aaPredicted RBP8.09□□□□□ -1.11
RIF1-208ENST00000457745 RHCGQ9UBD6 479 aa8.09□□□□□ -1.11
RIF1-208ENST00000457745 P2RX2Q9UBL9 471 aa8.09□□□□□ -1.11
RIF1-208ENST00000457745 C3orf18Q9UK00 162 aa8.09□□□□□ -1.11
RIF1-208ENST00000457745 MRPS33Q9Y291 106 aaKnown RBP8.09□□□□□ -1.11
RIF1-208ENST00000457745 FAM186AA6NE01 2351 aa8.08□□□□□ -1.12
RIF1-208ENST00000457745 PCNX3Q9H6A9 2034 aa8.08□□□□□ -1.12
RIF1-208ENST00000457745 CCDC187A0A096LP49 1063 aa8.08□□□□□ -1.12
RIF1-208ENST00000457745 NPIPB9F8W1W9 429 aa8.08□□□□□ -1.12
RIF1-208ENST00000457745 CLDN4O14493 209 aa8.08□□□□□ -1.12
RIF1-208ENST00000457745 CLOCKO15516 846 aa8.08□□□□□ -1.12
RIF1-208ENST00000457745 ASNA1O43681 348 aa8.08□□□□□ -1.12
RIF1-208ENST00000457745 KIAA0513O60268 411 aa8.08□□□□□ -1.12
RIF1-208ENST00000457745 F12P00748 615 aaPredicted RBP8.08□□□□□ -1.12
RIF1-208ENST00000457745 THY1P04216 161 aa8.08□□□□□ -1.12
RIF1-208ENST00000457745 IFI6P09912 130 aa8.08□□□□□ -1.12
RIF1-208ENST00000457745 ALOX5P09917 674 aa8.08□□□□□ -1.12
RIF1-208ENST00000457745 UMPSP11172 480 aa8.08□□□□□ -1.12
RIF1-208ENST00000457745 DDX5P17844 614 aaKnown RBP8.08□□□□□ -1.12
RIF1-208ENST00000457745 TNNI3P19429 210 aa8.08□□□□□ -1.12
RIF1-208ENST00000457745 PRKACGP22612 351 aa8.08□□□□□ -1.12
RIF1-208ENST00000457745 SLC5A2P31639 672 aa8.08□□□□□ -1.12
RIF1-208ENST00000457745 SELENOWP63302 87 aa8.08□□□□□ -1.12
RIF1-208ENST00000457745 FOXD4Q12950 439 aaPredicted RBP8.08□□□□□ -1.12
RIF1-208ENST00000457745 TARDBPQ13148 414 aaKnown RBP eCLIP8.08□□□□□ -1.125e-18■■■■■ 31.9
RIF1-208ENST00000457745 ILKQ13418 452 aa8.08□□□□□ -1.12
RIF1-208ENST00000457745 EBPQ15125 230 aaKnown RBP8.08□□□□□ -1.12
RIF1-208ENST00000457745 ELAVL1Q15717 326 aaKnown RBP8.08□□□□□ -1.12
RIF1-208ENST00000457745 ARHGAP11BQ3KRB8 267 aa8.08□□□□□ -1.12
RIF1-208ENST00000457745 NIPAL1Q6NVV3 410 aa8.08□□□□□ -1.12
RIF1-208ENST00000457745 TMEM205Q6UW68 189 aa8.08□□□□□ -1.12
RIF1-208ENST00000457745 IZUMO2Q6UXV1 221 aa8.08□□□□□ -1.12
RIF1-208ENST00000457745 APOOLQ6UXV4 268 aa8.08□□□□□ -1.12
RIF1-208ENST00000457745 SAMD14Q8IZD0 417 aaPredicted RBP8.08□□□□□ -1.12
RIF1-208ENST00000457745 EID3Q8N140 333 aa8.08□□□□□ -1.12
RIF1-208ENST00000457745 GALNT4Q8N4A0 578 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms