RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 VEZF1Q14119 521 aa15.33■□□□□ 0.05
CCDC90B-202ENST00000455220 NNATQ16517 81 aa15.33■□□□□ 0.05
CCDC90B-202ENST00000455220 ARHGAP11BQ3KRB8 267 aa15.33■□□□□ 0.05
CCDC90B-202ENST00000455220 ATAD3BQ5T9A4 648 aa15.33■□□□□ 0.05
CCDC90B-202ENST00000455220 AP1ARQ63HQ0 302 aa15.33■□□□□ 0.05
CCDC90B-202ENST00000455220 TCTN3Q6NUS6 607 aa15.33■□□□□ 0.05
CCDC90B-202ENST00000455220 PTRH1Q86Y79 214 aaKnown RBP15.33■□□□□ 0.05
CCDC90B-202ENST00000455220 HPS6Q86YV9 775 aa15.33■□□□□ 0.05
CCDC90B-202ENST00000455220 MICU2Q8IYU8 434 aa15.33■□□□□ 0.05
CCDC90B-202ENST00000455220 CLEC1AQ8NC01 280 aa15.33■□□□□ 0.05
CCDC90B-202ENST00000455220 FAM156AQ8NDB6 213 aa15.33■□□□□ 0.05
CCDC90B-202ENST00000455220 OR4N2Q8NGD1 307 aa15.33■□□□□ 0.05
CCDC90B-202ENST00000455220 PSMF1Q92530 271 aa15.33■□□□□ 0.05
CCDC90B-202ENST00000455220 UTP4Q969X6 686 aaKnown RBP15.33■□□□□ 0.05
CCDC90B-202ENST00000455220 TRNT1Q96Q11 434 aaKnown RBP15.33■□□□□ 0.05
CCDC90B-202ENST00000455220 RYDENQ9NUL5 291 aaKnown RBP15.33■□□□□ 0.05
CCDC90B-202ENST00000455220 CBLCQ9ULV8 474 aa15.33■□□□□ 0.05
CCDC90B-202ENST00000455220 ZNF451Q9Y4E5 1061 aa15.33■□□□□ 0.05
CCDC90B-202ENST00000455220 ANKRD11Q6UB99 2663 aaPredicted RBP15.33■□□□□ 0.04
CCDC90B-202ENST00000455220 ARGFXA6NJG6 315 aa15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 SORBS2O94875 1100 aaKnown RBP15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 KCNK2O95069 426 aa15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 NADKO95544 446 aaPredicted RBP15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 GUSBP08236 651 aa15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 KCNJ2P63252 427 aa15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 MRPS22P82650 360 aaKnown RBP15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 CDK6Q00534 326 aa15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 SCARB2Q14108 478 aa15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 SYPL1Q16563 259 aa15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 DCST2Q5T1A1 773 aa15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 PRAMEF8Q5VWM4 474 aa15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 PRAMEF7Q5VXH5 474 aa15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 CCDC81Q6ZN84 652 aa15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 C16orf62Q7Z3J2 963 aa15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 PROSER1Q86XN7 944 aa15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 SLC30A8Q8IWU4 369 aa15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 SLC5A8Q8N695 610 aa15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 ANKFN1Q8N957 763 aa15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 TNIP2Q8NFZ5 429 aa15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 BRIX1Q8TDN6 353 aaKnown RBP15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 THAP3Q8WTV1 239 aaPredicted RBP15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 RMND5BQ96G75 393 aaPredicted RBP15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 TMEM19Q96HH6 336 aa15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 THOC3Q96J01 351 aaKnown RBP15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 SDF2Q99470 211 aa15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 LHPPQ9H008 270 aa15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 LIN28AQ9H9Z2 209 aaKnown RBP15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 SUCOQ9UBS9 1254 aaKnown RBP15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 RAXQ9Y2V3 346 aa15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 OR10H1Q9Y4A9 318 aa15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 LOC400499M0QZD8 3231 aa15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 TMEM247A6NEH6 219 aa15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 BCHEP06276 602 aa15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 CHRM4P08173 479 aa15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 NR2F1P10589 423 aa15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 TCN1P20061 433 aaPredicted RBP15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 MLF1P58340 268 aa15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 BNIP2Q12982 314 aa15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 GNA13Q14344 377 aa15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 BROXQ5VW32 411 aa15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 REEP3Q6NUK4 255 aa15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 C16orf47Q6ZP98 133 aaPredicted RBP15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 LRRC74BQ6ZQY2 392 aa15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 RPS19BP1Q86WX3 136 aaKnown RBP15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 TAGAPQ8N103 731 aa15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 SLC34A3Q8N130 599 aa15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 SLC15A4Q8N697 577 aa15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 BCORP1Q8N888 145 aa15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 HIPK4Q8NE63 616 aa15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 NFKBIDQ8NI38 313 aa15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 DCBLD2Q96PD2 775 aa15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 LMF1Q96S06 567 aa15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 ZNF350Q9GZX5 532 aa15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 ING2Q9H160 280 aa15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 RUBCNLQ9H714 662 aa15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 BCL2L10Q9HD36 194 aa15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 SLC7A8Q9UHI5 535 aa15.32■□□□□ 0.04
CCDC90B-202ENST00000455220 A0A087WV48 116 aa15.31■□□□□ 0.04
CCDC90B-202ENST00000455220 TAF4O00268 1085 aa15.31■□□□□ 0.04
CCDC90B-202ENST00000455220 WWP2O00308 870 aa15.31■□□□□ 0.04
CCDC90B-202ENST00000455220 SLC28A2O43868 658 aa15.31■□□□□ 0.04
CCDC90B-202ENST00000455220 ZNF354AO60765 605 aaPredicted RBP15.31■□□□□ 0.04
CCDC90B-202ENST00000455220 ZIC2O95409 532 aaPredicted RBP15.31■□□□□ 0.04
CCDC90B-202ENST00000455220 IGKV1D-16P01601 117 aa15.31■□□□□ 0.04
CCDC90B-202ENST00000455220 GGT1P19440 569 aa15.31■□□□□ 0.04
CCDC90B-202ENST00000455220 ABCD3P28288 659 aa15.31■□□□□ 0.04
CCDC90B-202ENST00000455220 CRISP3P54108 245 aa15.31■□□□□ 0.04
CCDC90B-202ENST00000455220 NRG3P56975 720 aa15.31■□□□□ 0.04
CCDC90B-202ENST00000455220 PCBP3P57721 371 aaKnown RBP15.31■□□□□ 0.04
CCDC90B-202ENST00000455220 TRIM25Q14258 630 aaKnown RBP15.31■□□□□ 0.04
CCDC90B-202ENST00000455220 DECR1Q16698 335 aa15.31■□□□□ 0.04
CCDC90B-202ENST00000455220 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.31■□□□□ 0.04
CCDC90B-202ENST00000455220 CCNJQ5T5M9 372 aa15.31■□□□□ 0.04
CCDC90B-202ENST00000455220 LRRC69Q6ZNQ3 347 aa15.31■□□□□ 0.04
CCDC90B-202ENST00000455220 ZNF771Q7L3S4 317 aaPredicted RBP15.31■□□□□ 0.04
CCDC90B-202ENST00000455220 APLFQ8IW19 511 aaPredicted RBP15.31■□□□□ 0.04
CCDC90B-202ENST00000455220 GALNT16Q8N428 558 aa15.31■□□□□ 0.04
CCDC90B-202ENST00000455220 TMBIM1Q969X1 311 aa15.31■□□□□ 0.04
CCDC90B-202ENST00000455220 ASB9Q96DX5 294 aa15.31■□□□□ 0.04
CCDC90B-202ENST00000455220 RASL10BQ96S79 203 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms