RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 DUSP5Q16690 384 aa25.68■■□□□ 1.7
SMARCC1-203ENST00000454240 TBCELQ5QJ74 424 aa25.68■■□□□ 1.7
SMARCC1-203ENST00000454240 METTL21CQ5VZV1 264 aa25.68■■□□□ 1.7
SMARCC1-203ENST00000454240 CDC73Q6P1J9 531 aa25.68■■□□□ 1.7
SMARCC1-203ENST00000454240 GK5Q6ZS86 529 aa25.68■■□□□ 1.7
SMARCC1-203ENST00000454240 MSANTD1Q6ZTZ1 278 aa25.68■■□□□ 1.7
SMARCC1-203ENST00000454240 CLEC4FQ8N1N0 589 aa25.68■■□□□ 1.7
SMARCC1-203ENST00000454240 GALNT11Q8NCW6 608 aa25.68■■□□□ 1.7
SMARCC1-203ENST00000454240 GPR151Q8TDV0 419 aa25.68■■□□□ 1.7
SMARCC1-203ENST00000454240 PIK3R3Q92569 461 aa25.68■■□□□ 1.7
SMARCC1-203ENST00000454240 NODALQ96S42 347 aa25.68■■□□□ 1.7
SMARCC1-203ENST00000454240 ANGPTL4Q9BY76 406 aa25.68■■□□□ 1.7
SMARCC1-203ENST00000454240 ACTRT3Q9BYD9 372 aa25.68■■□□□ 1.7
SMARCC1-203ENST00000454240 ZNF385DQ9H6B1 395 aa25.68■■□□□ 1.7
SMARCC1-203ENST00000454240 SERHLQ9NQF3 203 aa25.68■■□□□ 1.7
SMARCC1-203ENST00000454240 SVILO95425 2214 aa25.67■■□□□ 1.7
SMARCC1-203ENST00000454240 RNF103-CHMP3A0A140T963 221 aa25.67■■□□□ 1.7
SMARCC1-203ENST00000454240 GXYLT2A0PJZ3 443 aa25.67■■□□□ 1.7
SMARCC1-203ENST00000454240 J3QKU1 62 aa25.67■■□□□ 1.7
SMARCC1-203ENST00000454240 ALOX5P09917 674 aa25.67■■□□□ 1.7
SMARCC1-203ENST00000454240 NCF2P19878 526 aaPredicted RBP25.67■■□□□ 1.7
SMARCC1-203ENST00000454240 IL12BP29460 328 aa25.67■■□□□ 1.7
SMARCC1-203ENST00000454240 RFC3P40938 356 aa25.67■■□□□ 1.7
SMARCC1-203ENST00000454240 ALDH6A1Q02252 535 aaKnown RBP25.67■■□□□ 1.7
SMARCC1-203ENST00000454240 EFR3AQ14156 821 aa25.67■■□□□ 1.7
SMARCC1-203ENST00000454240 DECR1Q16698 335 aa25.67■■□□□ 1.7
SMARCC1-203ENST00000454240 BICRALQ6AI39 1079 aa25.67■■□□□ 1.7
SMARCC1-203ENST00000454240 C6orf120Q7Z4R8 191 aa25.67■■□□□ 1.7
SMARCC1-203ENST00000454240 SIAH3Q8IW03 269 aa25.67■■□□□ 1.7
SMARCC1-203ENST00000454240 FBXO30Q8TB52 745 aa25.67■■□□□ 1.7
SMARCC1-203ENST00000454240 EFHD2Q96C19 240 aaPredicted RBP25.67■■□□□ 1.7
SMARCC1-203ENST00000454240 PANX1Q96RD7 426 aa25.67■■□□□ 1.7
SMARCC1-203ENST00000454240 STACQ99469 402 aa25.67■■□□□ 1.7
SMARCC1-203ENST00000454240 INPP5KQ9BT40 448 aa25.67■■□□□ 1.7
SMARCC1-203ENST00000454240 PIGUQ9H490 435 aa25.67■■□□□ 1.7
SMARCC1-203ENST00000454240 DUSP22Q9NRW4 184 aa25.67■■□□□ 1.7
SMARCC1-203ENST00000454240 FAF1Q9UNN5 650 aaPredicted RBP25.67■■□□□ 1.7
SMARCC1-203ENST00000454240 SEC23IPQ9Y6Y8 1000 aaKnown RBP25.67■■□□□ 1.7
SMARCC1-203ENST00000454240 NBASA2RRP1 2371 aa25.67■■□□□ 1.7
SMARCC1-203ENST00000454240 WISP2O76076 250 aa25.66■■□□□ 1.7
SMARCC1-203ENST00000454240 CBX6O95503 412 aa25.66■■□□□ 1.7
SMARCC1-203ENST00000454240 IL33O95760 270 aa25.66■■□□□ 1.7
SMARCC1-203ENST00000454240 EDN3P14138 238 aa25.66■■□□□ 1.7
SMARCC1-203ENST00000454240 MAN2A2P49641 1150 aa25.66■■□□□ 1.7
SMARCC1-203ENST00000454240 ARFIP2P53365 341 aa25.66■■□□□ 1.7
SMARCC1-203ENST00000454240 MRPS22P82650 360 aaKnown RBP25.66■■□□□ 1.7
SMARCC1-203ENST00000454240 RCAN2Q14206 197 aa25.66■■□□□ 1.7
SMARCC1-203ENST00000454240 BLOC1S3Q6QNY0 202 aa25.66■■□□□ 1.7
SMARCC1-203ENST00000454240 FAM110BQ8TC76 370 aa25.66■■□□□ 1.7
SMARCC1-203ENST00000454240 VPS33AQ96AX1 596 aa25.66■■□□□ 1.7
SMARCC1-203ENST00000454240 TMCO6Q96DC7 493 aa25.66■■□□□ 1.7
SMARCC1-203ENST00000454240 TUBA8Q9NY65 449 aaPredicted RBP25.66■■□□□ 1.7
SMARCC1-203ENST00000454240 CCDC167Q9P0B6 97 aa25.66■■□□□ 1.7
SMARCC1-203ENST00000454240 KLHL14Q9P2G3 628 aa25.66■■□□□ 1.7
SMARCC1-203ENST00000454240 MRTO4Q9UKD2 239 aaKnown RBP25.66■■□□□ 1.7
SMARCC1-203ENST00000454240 VPS4AQ9UN37 437 aa25.66■■□□□ 1.7
SMARCC1-203ENST00000454240 CCDC154A6NI56 674 aa25.65■■□□□ 1.7
SMARCC1-203ENST00000454240 GLSO94925 669 aaPredicted RBP25.65■■□□□ 1.7
SMARCC1-203ENST00000454240 SOX30O94993 753 aa25.65■■□□□ 1.7
SMARCC1-203ENST00000454240 SNX4O95219 450 aa25.65■■□□□ 1.7
SMARCC1-203ENST00000454240 KCNH1O95259 989 aa25.65■■□□□ 1.7
SMARCC1-203ENST00000454240 KRT16P08779 473 aa25.65■■□□□ 1.7
SMARCC1-203ENST00000454240 ZNF24P17028 368 aa25.65■■□□□ 1.7
SMARCC1-203ENST00000454240 CDKN2CP42773 168 aa25.65■■□□□ 1.7
SMARCC1-203ENST00000454240 KCNJ2P63252 427 aa25.65■■□□□ 1.7
SMARCC1-203ENST00000454240 SNTA1Q13424 505 aa25.65■■□□□ 1.7
SMARCC1-203ENST00000454240 HYAL4Q2M3T9 481 aa25.65■■□□□ 1.7
SMARCC1-203ENST00000454240 TIGD2Q4W5G0 525 aa25.65■■□□□ 1.7
SMARCC1-203ENST00000454240 ATCAYQ86WG3 371 aa25.65■■□□□ 1.7
SMARCC1-203ENST00000454240 ZGRF1Q86YA3 2104 aa25.65■■□□□ 1.7
SMARCC1-203ENST00000454240 ST6GALNAC3Q8NDV1 305 aa25.65■■□□□ 1.7
SMARCC1-203ENST00000454240 RNF138Q8WVD3 245 aa25.65■■□□□ 1.7
SMARCC1-203ENST00000454240 JADE3Q92613 823 aa25.65■■□□□ 1.7
SMARCC1-203ENST00000454240 OTUB1Q96FW1 271 aaPredicted RBP25.65■■□□□ 1.7
SMARCC1-203ENST00000454240 CHMP6Q96FZ7 201 aa25.65■■□□□ 1.7
SMARCC1-203ENST00000454240 DOHHQ9BU89 302 aa25.65■■□□□ 1.7
SMARCC1-203ENST00000454240 TTTY12Q9BZ98 90 aa25.65■■□□□ 1.7
SMARCC1-203ENST00000454240 RABEP2Q9H5N1 569 aa25.65■■□□□ 1.7
SMARCC1-203ENST00000454240 IL1RL2Q9HB29 575 aa25.65■■□□□ 1.7
SMARCC1-203ENST00000454240 SLC52A3Q9NQ40 469 aa25.65■■□□□ 1.7
SMARCC1-203ENST00000454240 NCKAP5O14513 1909 aa25.65■■□□□ 1.7
SMARCC1-203ENST00000454240 PYCARD-AS1I3L0S3 204 aa25.64■■□□□ 1.7
SMARCC1-203ENST00000454240 TRIM3O75382 744 aaPredicted RBP25.64■■□□□ 1.7
SMARCC1-203ENST00000454240 IGKV1D-16P01601 117 aa25.64■■□□□ 1.7
SMARCC1-203ENST00000454240 CYP4B1P13584 511 aa25.64■■□□□ 1.7
SMARCC1-203ENST00000454240 PTGDSP41222 190 aa25.64■■□□□ 1.7
SMARCC1-203ENST00000454240 GYS2P54840 703 aa25.64■■□□□ 1.7
SMARCC1-203ENST00000454240 PSMD4P55036 377 aaKnown RBP25.64■■□□□ 1.7
SMARCC1-203ENST00000454240 SF3A3Q12874 501 aaKnown RBP eCLIP25.64■■□□□ 1.7
SMARCC1-203ENST00000454240 SAXO2Q658L1 398 aa25.64■■□□□ 1.7
SMARCC1-203ENST00000454240 ADAMTS15Q8TE58 950 aa25.64■■□□□ 1.7
SMARCC1-203ENST00000454240 RMND5BQ96G75 393 aaPredicted RBP25.64■■□□□ 1.7
SMARCC1-203ENST00000454240 SLC35A5Q9BS91 424 aa25.64■■□□□ 1.7
SMARCC1-203ENST00000454240 SERHL2Q9H4I8 314 aa25.64■■□□□ 1.7
SMARCC1-203ENST00000454240 RMND5AQ9H871 391 aa25.64■■□□□ 1.7
SMARCC1-203ENST00000454240 METTL7AQ9H8H3 244 aa25.64■■□□□ 1.7
SMARCC1-203ENST00000454240 RFXANKO14593 260 aa25.63■■□□□ 1.69
SMARCC1-203ENST00000454240 KCNK2O95069 426 aa25.63■■□□□ 1.69
SMARCC1-203ENST00000454240 MATN1P21941 496 aa25.63■■□□□ 1.69
SMARCC1-203ENST00000454240 KCNK10P57789 538 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms