RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 IDH3AP50213 366 aa18.29■□□□□ 0.52
COL9A3-202ENST00000452372 PNLIPRP2P54317 469 aa18.29■□□□□ 0.52
COL9A3-202ENST00000452372 NME5P56597 212 aa18.29■□□□□ 0.52
COL9A3-202ENST00000452372 KCNJ2P63252 427 aa18.29■□□□□ 0.52
COL9A3-202ENST00000452372 HBA1P69905 142 aa18.29■□□□□ 0.52
COL9A3-202ENST00000452372 PHC1P78364 1004 aa18.29■□□□□ 0.52
COL9A3-202ENST00000452372 GAB1Q13480 694 aa18.29■□□□□ 0.52
COL9A3-202ENST00000452372 GSTA3Q16772 222 aa18.29■□□□□ 0.52
COL9A3-202ENST00000452372 HYAL4Q2M3T9 481 aa18.29■□□□□ 0.52
COL9A3-202ENST00000452372 PDCD4Q53EL6 469 aaKnown RBP18.29■□□□□ 0.52
COL9A3-202ENST00000452372 SPANXN4Q5MJ08 99 aa18.29■□□□□ 0.52
COL9A3-202ENST00000452372 ANXA8L1Q5VT79 327 aa18.29■□□□□ 0.52
COL9A3-202ENST00000452372 TMEM198Q66K66 360 aa18.29■□□□□ 0.52
COL9A3-202ENST00000452372 GFRALQ6UXV0 394 aa18.29■□□□□ 0.52
COL9A3-202ENST00000452372 ACAD11Q709F0 780 aa18.29■□□□□ 0.52
COL9A3-202ENST00000452372 WDR53Q7Z5U6 358 aaPredicted RBP18.29■□□□□ 0.52
COL9A3-202ENST00000452372 CDRT4Q8N9R6 151 aa18.29■□□□□ 0.52
COL9A3-202ENST00000452372 GLB1L3Q8NCI6 653 aaPredicted RBP18.29■□□□□ 0.52
COL9A3-202ENST00000452372 VPS37AQ8NEZ2 397 aa18.29■□□□□ 0.52
COL9A3-202ENST00000452372 NTNG2Q96CW9 530 aa18.29■□□□□ 0.52
COL9A3-202ENST00000452372 COL21A1Q96P44 957 aa18.29■□□□□ 0.52
COL9A3-202ENST00000452372 ANGPTL4Q9BY76 406 aa18.29■□□□□ 0.52
COL9A3-202ENST00000452372 TTTY12Q9BZ98 90 aa18.29■□□□□ 0.52
COL9A3-202ENST00000452372 IL1RL2Q9HB29 575 aa18.29■□□□□ 0.52
COL9A3-202ENST00000452372 Q9N2J8 555 aa18.29■□□□□ 0.52
COL9A3-202ENST00000452372 EQTNQ9NQ60 294 aa18.29■□□□□ 0.52
COL9A3-202ENST00000452372 TCF7L2Q9NQB0 619 aa18.29■□□□□ 0.52
COL9A3-202ENST00000452372 ZCCHC3Q9NUD5 404 aaKnown RBP18.29■□□□□ 0.52
COL9A3-202ENST00000452372 SNX8Q9Y5X2 465 aa18.29■□□□□ 0.52
COL9A3-202ENST00000452372 GTF3C1Q12789 2109 aa18.29■□□□□ 0.52
COL9A3-202ENST00000452372 E9PBE3 544 aa18.28■□□□□ 0.52
COL9A3-202ENST00000452372 TFECO14948 347 aaPredicted RBP18.28■□□□□ 0.52
COL9A3-202ENST00000452372 POLR3GO15318 223 aaPredicted RBP18.28■□□□□ 0.52
COL9A3-202ENST00000452372 CFLARO15519 480 aa18.28■□□□□ 0.52
COL9A3-202ENST00000452372 HS6ST1O60243 411 aa18.28■□□□□ 0.52
COL9A3-202ENST00000452372 NKX2-2O95096 273 aa18.28■□□□□ 0.52
COL9A3-202ENST00000452372 SNX4O95219 450 aa18.28■□□□□ 0.52
COL9A3-202ENST00000452372 STSP08842 583 aa18.28■□□□□ 0.52
COL9A3-202ENST00000452372 IL12AP29459 219 aa18.28■□□□□ 0.52
COL9A3-202ENST00000452372 GABRA3P34903 492 aa18.28■□□□□ 0.52
COL9A3-202ENST00000452372 KRT20P35900 424 aa18.28■□□□□ 0.52
COL9A3-202ENST00000452372 AQP5P55064 265 aa18.28■□□□□ 0.52
COL9A3-202ENST00000452372 PPIAP62937 165 aaKnown RBP18.28■□□□□ 0.52
COL9A3-202ENST00000452372 PLGLB1Q02325 96 aa18.28■□□□□ 0.52
COL9A3-202ENST00000452372 FAM174BQ3ZCQ3 159 aa18.28■□□□□ 0.52
COL9A3-202ENST00000452372 VPS26BQ4G0F5 336 aa18.28■□□□□ 0.52
COL9A3-202ENST00000452372 DESI1Q6ICB0 168 aa18.28■□□□□ 0.52
COL9A3-202ENST00000452372 MFSD12Q6NUT3 480 aa18.28■□□□□ 0.52
COL9A3-202ENST00000452372 SZRD1Q7Z422 152 aa18.28■□□□□ 0.52
COL9A3-202ENST00000452372 SLC22A16Q86VW1 577 aa18.28■□□□□ 0.52
COL9A3-202ENST00000452372 CLECL1Q8IZS7 167 aa18.28■□□□□ 0.52
COL9A3-202ENST00000452372 SFXN5Q8TD22 340 aa18.28■□□□□ 0.52
COL9A3-202ENST00000452372 MOAP1Q96BY2 351 aa18.28■□□□□ 0.52
COL9A3-202ENST00000452372 TMCO6Q96DC7 493 aa18.28■□□□□ 0.52
COL9A3-202ENST00000452372 NODALQ96S42 347 aa18.28■□□□□ 0.52
COL9A3-202ENST00000452372 ADOQ96SZ5 270 aa18.28■□□□□ 0.52
COL9A3-202ENST00000452372 EBF4Q9BQW3 602 aa18.28■□□□□ 0.52
COL9A3-202ENST00000452372 DOHHQ9BU89 302 aa18.28■□□□□ 0.52
COL9A3-202ENST00000452372 CCDC28BQ9BUN5 200 aa18.28■□□□□ 0.52
COL9A3-202ENST00000452372 ZFP64Q9NPA5 681 aa18.28■□□□□ 0.52
COL9A3-202ENST00000452372 SDR39U1Q9NRG7 319 aaPredicted RBP18.28■□□□□ 0.52
COL9A3-202ENST00000452372 CBLCQ9ULV8 474 aa18.28■□□□□ 0.52
COL9A3-202ENST00000452372 ZNF407Q9C0G0 2248 aa18.27■□□□□ 0.52
COL9A3-202ENST00000452372 ACOT7O00154 380 aa18.27■□□□□ 0.52
COL9A3-202ENST00000452372 EDF1O60869 148 aaKnown RBP18.27■□□□□ 0.52
COL9A3-202ENST00000452372 TRIM3O75382 744 aaPredicted RBP18.27■□□□□ 0.52
COL9A3-202ENST00000452372 HMGN2P05204 90 aaKnown RBP18.27■□□□□ 0.52
COL9A3-202ENST00000452372 S100A3P33764 101 aa18.27■□□□□ 0.52
COL9A3-202ENST00000452372 PRIM2P49643 509 aa18.27■□□□□ 0.52
COL9A3-202ENST00000452372 KCNK10P57789 538 aa18.27■□□□□ 0.52
COL9A3-202ENST00000452372 MRPS22P82650 360 aaKnown RBP18.27■□□□□ 0.52
COL9A3-202ENST00000452372 SNTA1Q13424 505 aa18.27■□□□□ 0.52
COL9A3-202ENST00000452372 EFR3AQ14156 821 aa18.27■□□□□ 0.52
COL9A3-202ENST00000452372 DECR1Q16698 335 aa18.27■□□□□ 0.52
COL9A3-202ENST00000452372 SPDYE7PQ495Y7 208 aa18.27■□□□□ 0.52
COL9A3-202ENST00000452372 CMPK2Q5EBM0 449 aa18.27■□□□□ 0.52
COL9A3-202ENST00000452372 EXOSC6Q5RKV6 272 aaKnown RBP18.27■□□□□ 0.52
COL9A3-202ENST00000452372 BICRALQ6AI39 1079 aa18.27■□□□□ 0.52
COL9A3-202ENST00000452372 OR56A1Q8NGH5 318 aa18.27■□□□□ 0.52
COL9A3-202ENST00000452372 C16orf58Q96GQ5 468 aa18.27■□□□□ 0.52
COL9A3-202ENST00000452372 MARK4Q96L34 752 aa18.27■□□□□ 0.52
COL9A3-202ENST00000452372 RILPQ96NA2 401 aa18.27■□□□□ 0.52
COL9A3-202ENST00000452372 ZBTB18Q99592 522 aa18.27■□□□□ 0.52
COL9A3-202ENST00000452372 ZDHHC11Q9H8X9 412 aa18.27■□□□□ 0.52
COL9A3-202ENST00000452372 FAM120CQ9NX05 1096 aaKnown RBP18.27■□□□□ 0.52
COL9A3-202ENST00000452372 ZIM2Q9NZV7 527 aa18.27■□□□□ 0.52
COL9A3-202ENST00000452372 MRTO4Q9UKD2 239 aaKnown RBP18.27■□□□□ 0.52
COL9A3-202ENST00000452372 BOKQ9UMX3 212 aaPredicted RBP18.27■□□□□ 0.52
COL9A3-202ENST00000452372 PCDHGB4Q9UN71 923 aa18.27■□□□□ 0.52
COL9A3-202ENST00000452372 ABCA12Q86UK0 2595 aa18.27■□□□□ 0.51
COL9A3-202ENST00000452372 DNAJC13O75165 2243 aa18.26■□□□□ 0.51
COL9A3-202ENST00000452372 SLC22A3O75751 556 aa18.26■□□□□ 0.51
COL9A3-202ENST00000452372 ACP2P11117 423 aa18.26■□□□□ 0.51
COL9A3-202ENST00000452372 IL12BP29460 328 aa18.26■□□□□ 0.51
COL9A3-202ENST00000452372 SLC30A6Q6NXT4 461 aa18.26■□□□□ 0.51
COL9A3-202ENST00000452372 PACS2Q86VP3 889 aa18.26■□□□□ 0.51
COL9A3-202ENST00000452372 ANKRD46Q86W74 232 aa18.26■□□□□ 0.51
COL9A3-202ENST00000452372 GHDCQ8N2G8 530 aa18.26■□□□□ 0.51
COL9A3-202ENST00000452372 TMEM251Q8N6I4 163 aa18.26■□□□□ 0.51
COL9A3-202ENST00000452372 SLC16A11Q8NCK7 471 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms