RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, human

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX3-209	ENST00000451859	NUP54	Q7Z3B4	507 aa		7.91	□□□□□ -1.14
RFX3-209	ENST00000451859	SZRD1	Q7Z422	152 aa		7.91	□□□□□ -1.14
RFX3-209	ENST00000451859	TDRP	Q86YL5	185 aa		7.91	□□□□□ -1.14
RFX3-209	ENST00000451859	SAMD14	Q8IZD0	417 aa	Predicted RBP	7.91	□□□□□ -1.14
RFX3-209	ENST00000451859	NAXE	Q8NCW5	288 aa		7.91	□□□□□ -1.14
RFX3-209	ENST00000451859	FAM83F	Q8NEG4	500 aa	Predicted RBP	7.91	□□□□□ -1.14
RFX3-209	ENST00000451859	TNIP2	Q8NFZ5	429 aa		7.91	□□□□□ -1.14
RFX3-209	ENST00000451859	OR4N2	Q8NGD1	307 aa		7.91	□□□□□ -1.14
RFX3-209	ENST00000451859	OR14L1P	Q8NHC6	308 aa		7.91	□□□□□ -1.14
RFX3-209	ENST00000451859	CLHC1	Q8NHS4	586 aa		7.91	□□□□□ -1.14
RFX3-209	ENST00000451859	AGR3	Q8TD06	166 aa		7.91	□□□□□ -1.14
RFX3-209	ENST00000451859	ZNF675	Q8TD23	568 aa		7.91	□□□□□ -1.14
RFX3-209	ENST00000451859	ABTB1	Q969K4	478 aa	Predicted RBP	7.91	□□□□□ -1.14
RFX3-209	ENST00000451859	ZBTB9	Q96C00	473 aa		7.91	□□□□□ -1.14
RFX3-209	ENST00000451859	COL21A1	Q96P44	957 aa		7.91	□□□□□ -1.14
RFX3-209	ENST00000451859	TRIB1	Q96RU8	372 aa		7.91	□□□□□ -1.14
RFX3-209	ENST00000451859	TIMP4	Q99727	224 aa		7.91	□□□□□ -1.14
RFX3-209	ENST00000451859	ZNF559	Q9BR84	538 aa		7.91	□□□□□ -1.14
RFX3-209	ENST00000451859	UGT2B28	Q9BY64	529 aa		7.91	□□□□□ -1.14
RFX3-209	ENST00000451859	UBQLN3	Q9H347	655 aa		7.91	□□□□□ -1.14
RFX3-209	ENST00000451859	ANKZF1	Q9H8Y5	726 aa		7.91	□□□□□ -1.14
RFX3-209	ENST00000451859	L2HGDH	Q9H9P8	463 aa		7.91	□□□□□ -1.14
RFX3-209	ENST00000451859	RRAGD	Q9NQL2	400 aa	Predicted RBP	7.91	□□□□□ -1.14
RFX3-209	ENST00000451859	OXSM	Q9NWU1	459 aa		7.91	□□□□□ -1.14
RFX3-209	ENST00000451859	MID2	Q9UJV3	735 aa		7.91	□□□□□ -1.14
RFX3-209	ENST00000451859	GPR55	Q9Y2T6	319 aa	Predicted RBP	7.91	□□□□□ -1.14
RFX3-209	ENST00000451859	F8	P00451	2351 aa		7.91	□□□□□ -1.14
RFX3-209	ENST00000451859	OR6C70	A6NIJ9	312 aa		7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	C17orf51	A8MQB3	221 aa		7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	MYO1G	B0I1T2	1018 aa		7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	TMEM233	B4DJY2	109 aa		7.9	□□□□□ -1.14
RFX3-209	ENST00000451859		H0Y3Z8	333 aa		7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	AZIN1	O14977	448 aa		7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	TSPAN2	O60636	221 aa		7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	BCAS2	O75934	225 aa	Predicted RBP	7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	RSL1D1	O76021	490 aa	Known RBP	7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	LINC00032	P0C843	101 aa		7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	UROS	P10746	265 aa		7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	NAGA	P17050	411 aa		7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	EFNA1	P20827	205 aa	Predicted RBP	7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	TACR1	P25103	407 aa		7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	ELAVL4	P26378	380 aa	Known RBP	7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	GCK	P35557	465 aa		7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	AGFG1	P52594	562 aa	Known RBP	7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	RPL38	P63173	70 aa	Known RBP	7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	SRY	Q05066	204 aa		7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	HSPB3	Q12988	150 aa		7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	STX5	Q13190	355 aa		7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	GALNTL6	Q49A17	601 aa		7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	FAM71E1	Q6IPT2	247 aa		7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	SLC30A6	Q6NXT4	461 aa		7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	GALNT18	Q6P9A2	607 aa		7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	PLXDC2	Q6UX71	529 aa		7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	ZCCHC23	Q6ZST2	131 aa		7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	SEM1	Q6ZVN7	128 aa		7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	DDIAS	Q8IXT1	998 aa		7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	DMRTC2	Q8IXT2	367 aa	Predicted RBP	7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	CLYBL	Q8N0X4	340 aa		7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	EIF1AD	Q8N9N8	165 aa	Known RBP	7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	RELL2	Q8NC24	303 aa	Predicted RBP	7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	FBXO30	Q8TB52	745 aa		7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	GTPBP3	Q969Y2	492 aa	Known RBP	7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	CIDEC	Q96AQ7	238 aa	Predicted RBP	7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	TMCO6	Q96DC7	493 aa		7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	C11orf24	Q96F05	449 aa	Predicted RBP	7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	C14orf79	Q96F83	325 aa		7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	APOPT1	Q96IL0	206 aa		7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	EGLN2	Q96KS0	407 aa		7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	VSTM2L	Q96N03	204 aa		7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	TSSK3	Q96PN8	268 aa		7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	FAM111A	Q96PZ2	611 aa		7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	BTBD9	Q96Q07	612 aa		7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	MECR	Q9BV79	373 aa		7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	GATA5	Q9BWX5	397 aa	Predicted RBP	7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	GLIPR2	Q9H4G4	154 aa		7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	PPCS	Q9HAB8	311 aa		7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	LRTM1	Q9HBL6	345 aa		7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	MCCC2	Q9HCC0	563 aa		7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	MYNN	Q9NPC7	610 aa		7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	EQTN	Q9NQ60	294 aa		7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	DDX18	Q9NVP1	670 aa	Known RBP	7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	FLRT3	Q9NZU0	649 aa		7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	DKKL1	Q9UK85	242 aa		7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	RPH3A	Q9Y2J0	694 aa	Predicted RBP	7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	WIF1	Q9Y5W5	379 aa		7.9	□□□□□ -1.14
RFX3-209	ENST00000451859	ABCA4	P78363	2273 aa		7.89	□□□□□ -1.15
RFX3-209	ENST00000451859	SERTM1	A2A2V5	107 aa		7.89	□□□□□ -1.15
RFX3-209	ENST00000451859	HSPB2	A8KAH6	182 aa		7.89	□□□□□ -1.15
RFX3-209	ENST00000451859	AHRR	A9YTQ3	701 aa		7.89	□□□□□ -1.15
RFX3-209	ENST00000451859	EEF1E1-BLOC1S5	C9J1V9	151 aa		7.89	□□□□□ -1.15
RFX3-209	ENST00000451859	FAM47E-STBD1	D6RA91	191 aa		7.89	□□□□□ -1.15
RFX3-209	ENST00000451859		H3BQF6	201 aa		7.89	□□□□□ -1.15
RFX3-209	ENST00000451859	SLC28A1	O00337	649 aa		7.89	□□□□□ -1.15
RFX3-209	ENST00000451859	DVL2	O14641	736 aa		7.89	□□□□□ -1.15
RFX3-209	ENST00000451859	T	O15178	435 aa		7.89	□□□□□ -1.15
RFX3-209	ENST00000451859	EEF1E1	O43324	174 aa	Known RBP	7.89	□□□□□ -1.15
RFX3-209	ENST00000451859	RGS14	O43566	566 aa		7.89	□□□□□ -1.15
RFX3-209	ENST00000451859	GMFG	O60234	142 aa		7.89	□□□□□ -1.15
RFX3-209	ENST00000451859	PLOD3	O60568	738 aa		7.89	□□□□□ -1.15
RFX3-209	ENST00000451859	TRIM13	O60858	407 aa		7.89	□□□□□ -1.15

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms