RNA–Protein interactions for RNA: ENST00000447933.5

LINC01006-206, Transcript of long intergenic non-protein coding RNA 1006, human

TSL 3

Gene LINC01006, Length 766 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01006-206	ENST00000447933	C6orf136	Q5SQH8	315 aa		13.73	□□□□□ -0.21
LINC01006-206	ENST00000447933	B3GNT6	Q6ZMB0	384 aa		13.73	□□□□□ -0.21
LINC01006-206	ENST00000447933	R3HCC1L	Q7Z5L2	792 aa	Known RBP	13.73	□□□□□ -0.21
LINC01006-206	ENST00000447933	WDSUB1	Q8N9V3	476 aa		13.73	□□□□□ -0.21
LINC01006-206	ENST00000447933	CA5BP1	Q8WTZ4	195 aa		13.73	□□□□□ -0.21
LINC01006-206	ENST00000447933	MARVELD3	Q96A59	401 aa		13.73	□□□□□ -0.21
LINC01006-206	ENST00000447933	CIDEC	Q96AQ7	238 aa	Predicted RBP	13.73	□□□□□ -0.21
LINC01006-206	ENST00000447933	ZBED6CL	Q96FA7	236 aa	Predicted RBP	13.73	□□□□□ -0.21
LINC01006-206	ENST00000447933	LMF2	Q9BU23	707 aa	Known RBP	13.73	□□□□□ -0.21
LINC01006-206	ENST00000447933	CENPH	Q9H3R5	247 aa		13.73	□□□□□ -0.21
LINC01006-206	ENST00000447933	RUBCNL	Q9H714	662 aa		13.73	□□□□□ -0.21
LINC01006-206	ENST00000447933	GALNT9	Q9HCQ5	603 aa		13.73	□□□□□ -0.21
LINC01006-206	ENST00000447933	NTM	Q9P121	344 aa		13.73	□□□□□ -0.21
LINC01006-206	ENST00000447933	GIMAP2	Q9UG22	337 aa		13.73	□□□□□ -0.21
LINC01006-206	ENST00000447933	ATP6V1H	Q9UI12	483 aa		13.73	□□□□□ -0.21
LINC01006-206	ENST00000447933	RNF6	Q9Y252	685 aa		13.73	□□□□□ -0.21
LINC01006-206	ENST00000447933	OR10H1	Q9Y4A9	318 aa		13.73	□□□□□ -0.21
LINC01006-206	ENST00000447933	C15orf38-AP3S2	A0A0A6YYH1	394 aa		13.72	□□□□□ -0.21
LINC01006-206	ENST00000447933	C2orf72	A6NCS6	295 aa		13.72	□□□□□ -0.21
LINC01006-206	ENST00000447933	C19orf84	I3L1E1	186 aa		13.72	□□□□□ -0.21
LINC01006-206	ENST00000447933	ITM2A	O43736	263 aa		13.72	□□□□□ -0.21
LINC01006-206	ENST00000447933	LYPLA1	O75608	230 aa	Predicted RBP	13.72	□□□□□ -0.21
LINC01006-206	ENST00000447933	CBR3	O75828	277 aa		13.72	□□□□□ -0.21
LINC01006-206	ENST00000447933	SNUPN	O95149	360 aa	Known RBP	13.72	□□□□□ -0.21
LINC01006-206	ENST00000447933	ZWINT	O95229	277 aa		13.72	□□□□□ -0.21
LINC01006-206	ENST00000447933	HSPA4L	O95757	839 aa		13.72	□□□□□ -0.21
LINC01006-206	ENST00000447933	GABRA1	P14867	456 aa		13.72	□□□□□ -0.21
LINC01006-206	ENST00000447933	DDX5	P17844	614 aa	Known RBP	13.72	□□□□□ -0.21
LINC01006-206	ENST00000447933	IL12B	P29460	328 aa		13.72	□□□□□ -0.21
LINC01006-206	ENST00000447933	CHRNB4	P30926	498 aa		13.72	□□□□□ -0.21
LINC01006-206	ENST00000447933	ABCE1	P61221	599 aa	Known RBP	13.72	□□□□□ -0.21
LINC01006-206	ENST00000447933	CRYZ	Q08257	329 aa	Known RBP	13.72	□□□□□ -0.21
LINC01006-206	ENST00000447933	GAB1	Q13480	694 aa		13.72	□□□□□ -0.21
LINC01006-206	ENST00000447933	CHI3L2	Q15782	390 aa		13.72	□□□□□ -0.21
LINC01006-206	ENST00000447933	EIPR1	Q53HC9	387 aa		13.72	□□□□□ -0.21
LINC01006-206	ENST00000447933	C1orf185	Q5T7R7	199 aa		13.72	□□□□□ -0.21
LINC01006-206	ENST00000447933	VASN	Q6EMK4	673 aa		13.72	□□□□□ -0.21
LINC01006-206	ENST00000447933	ZFP28	Q8NHY6	868 aa		13.72	□□□□□ -0.21
LINC01006-206	ENST00000447933	HOXB13	Q92826	284 aa	Predicted RBP	13.72	□□□□□ -0.21
LINC01006-206	ENST00000447933	TIMP4	Q99727	224 aa		13.72	□□□□□ -0.21
LINC01006-206	ENST00000447933	ZNF395	Q9H8N7	513 aa	Predicted RBP	13.72	□□□□□ -0.21
LINC01006-206	ENST00000447933	KCNK9	Q9NPC2	374 aa		13.72	□□□□□ -0.21
LINC01006-206	ENST00000447933	CBLC	Q9ULV8	474 aa		13.72	□□□□□ -0.21
LINC01006-206	ENST00000447933	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	13.72	□□□□□ -0.21
LINC01006-206	ENST00000447933	PHF3	Q92576	2039 aa	Known RBP	13.72	□□□□□ -0.21
LINC01006-206	ENST00000447933	AHRR	A9YTQ3	701 aa		13.71	□□□□□ -0.21
LINC01006-206	ENST00000447933	SKAP2	O75563	359 aa	Predicted RBP	13.71	□□□□□ -0.21
LINC01006-206	ENST00000447933	MYZAP	P0CAP1	466 aa		13.71	□□□□□ -0.21
LINC01006-206	ENST00000447933	PRPS2	P11908	318 aa		13.71	□□□□□ -0.21
LINC01006-206	ENST00000447933	GRK2	P25098	689 aa		13.71	□□□□□ -0.21
LINC01006-206	ENST00000447933	GPC1	P35052	558 aa		13.71	□□□□□ -0.21
LINC01006-206	ENST00000447933	HPCAL1	P37235	193 aa		13.71	□□□□□ -0.21
LINC01006-206	ENST00000447933	RPL3	P39023	403 aa	Known RBP	13.71	□□□□□ -0.21
LINC01006-206	ENST00000447933	MAP3K8	P41279	467 aa		13.71	□□□□□ -0.21
LINC01006-206	ENST00000447933	GAS1	P54826	345 aa		13.71	□□□□□ -0.21
LINC01006-206	ENST00000447933	MANF	P55145	182 aa	Known RBP	13.71	□□□□□ -0.21
LINC01006-206	ENST00000447933	HSPB3	Q12988	150 aa		13.71	□□□□□ -0.21
LINC01006-206	ENST00000447933	MLC1	Q15049	377 aa		13.71	□□□□□ -0.21
LINC01006-206	ENST00000447933	ZNHIT3	Q15649	155 aa	Predicted RBP	13.71	□□□□□ -0.21
LINC01006-206	ENST00000447933	IL23R	Q5VWK5	629 aa		13.71	□□□□□ -0.21
LINC01006-206	ENST00000447933	PLCZ1	Q86YW0	608 aa		13.71	□□□□□ -0.21
LINC01006-206	ENST00000447933	CCDC71	Q8IV32	467 aa	Predicted RBP	13.71	□□□□□ -0.21
LINC01006-206	ENST00000447933	ULK2	Q8IYT8	1036 aa		13.71	□□□□□ -0.21
LINC01006-206	ENST00000447933	FNDC5	Q8NAU1	212 aa		13.71	□□□□□ -0.21
LINC01006-206	ENST00000447933	ACBD4	Q8NC06	268 aa		13.71	□□□□□ -0.21
LINC01006-206	ENST00000447933	FAM83F	Q8NEG4	500 aa	Predicted RBP	13.71	□□□□□ -0.21
LINC01006-206	ENST00000447933	CEP70	Q8NHQ1	597 aa		13.71	□□□□□ -0.21
LINC01006-206	ENST00000447933	EFHD2	Q96C19	240 aa	Predicted RBP	13.71	□□□□□ -0.21
LINC01006-206	ENST00000447933	TUBGCP3	Q96CW5	907 aa		13.71	□□□□□ -0.21
LINC01006-206	ENST00000447933	OR2B2	Q9GZK3	357 aa		13.71	□□□□□ -0.21
LINC01006-206	ENST00000447933	PRDM14	Q9GZV8	571 aa		13.71	□□□□□ -0.21
LINC01006-206	ENST00000447933		Q9N2J8	555 aa		13.71	□□□□□ -0.21
LINC01006-206	ENST00000447933	SERHL	Q9NQF3	203 aa		13.71	□□□□□ -0.21
LINC01006-206	ENST00000447933	ALKBH4	Q9NXW9	302 aa		13.71	□□□□□ -0.21
LINC01006-206	ENST00000447933	MAPRE3	Q9UPY8	281 aa		13.71	□□□□□ -0.21
LINC01006-206	ENST00000447933	SLC6A5	Q9Y345	797 aa		13.71	□□□□□ -0.21
LINC01006-206	ENST00000447933	WIF1	Q9Y5W5	379 aa		13.71	□□□□□ -0.21
LINC01006-206	ENST00000447933	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		13.7	□□□□□ -0.22
LINC01006-206	ENST00000447933	FAM47E-STBD1	D6RA91	191 aa		13.7	□□□□□ -0.22
LINC01006-206	ENST00000447933	SCAMP2	O15127	329 aa	Known RBP	13.7	□□□□□ -0.22
LINC01006-206	ENST00000447933	ERLIN1	O75477	346 aa		13.7	□□□□□ -0.22
LINC01006-206	ENST00000447933	IL33	O95760	270 aa		13.7	□□□□□ -0.22
LINC01006-206	ENST00000447933	CYP4B1	P13584	511 aa		13.7	□□□□□ -0.22
LINC01006-206	ENST00000447933	COX6B1	P14854	86 aa		13.7	□□□□□ -0.22
LINC01006-206	ENST00000447933	BMP7	P18075	431 aa		13.7	□□□□□ -0.22
LINC01006-206	ENST00000447933	GABRA3	P34903	492 aa		13.7	□□□□□ -0.22
LINC01006-206	ENST00000447933	KIR3DL1	P43629	444 aa		13.7	□□□□□ -0.22
LINC01006-206	ENST00000447933	EMX2	Q04743	252 aa		13.7	□□□□□ -0.22
LINC01006-206	ENST00000447933	PTGR1	Q14914	329 aa		13.7	□□□□□ -0.22
LINC01006-206	ENST00000447933	TOMM20	Q15388	145 aa		13.7	□□□□□ -0.22
LINC01006-206	ENST00000447933	DECR1	Q16698	335 aa		13.7	□□□□□ -0.22
LINC01006-206	ENST00000447933	SMU1	Q2TAY7	513 aa		13.7	□□□□□ -0.22
LINC01006-206	ENST00000447933	WIPI1	Q5MNZ9	446 aa	Predicted RBP	13.7	□□□□□ -0.22
LINC01006-206	ENST00000447933	BEND6	Q5SZJ8	279 aa	Predicted RBP	13.7	□□□□□ -0.22
LINC01006-206	ENST00000447933	WDR53	Q7Z5U6	358 aa	Predicted RBP	13.7	□□□□□ -0.22
LINC01006-206	ENST00000447933	YRDC	Q86U90	279 aa	Known RBP	13.7	□□□□□ -0.22
LINC01006-206	ENST00000447933	NATD1	Q8N6N6	113 aa		13.7	□□□□□ -0.22
LINC01006-206	ENST00000447933	ZNF781	Q8N8C0	355 aa		13.7	□□□□□ -0.22
LINC01006-206	ENST00000447933	ZBTB9	Q96C00	473 aa		13.7	□□□□□ -0.22
LINC01006-206	ENST00000447933	GIMAP5	Q96F15	307 aa		13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms