RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 HPF1Q9NWY4 346 aa10.7□□□□□ -0.7
LINC00408-201ENST00000447784 THUMPD1Q9NXG2 353 aaKnown RBP10.7□□□□□ -0.7
LINC00408-201ENST00000447784 GIN1Q9NXP7 522 aa10.7□□□□□ -0.7
LINC00408-201ENST00000447784 SLAMF8Q9P0V8 285 aa10.7□□□□□ -0.7
LINC00408-201ENST00000447784 MAP10Q9P2G4 905 aa10.7□□□□□ -0.7
LINC00408-201ENST00000447784 CBLCQ9ULV8 474 aa10.7□□□□□ -0.7
LINC00408-201ENST00000447784 DTX4Q9Y2E6 619 aa10.7□□□□□ -0.7
LINC00408-201ENST00000447784 MDC1Q14676 2089 aaKnown RBP10.7□□□□□ -0.7
LINC00408-201ENST00000447784 PCSK5Q92824 1860 aa10.7□□□□□ -0.7
LINC00408-201ENST00000447784 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.69□□□□□ -0.7
LINC00408-201ENST00000447784 C15orf38-AP3S2A0A0A6YYH1 394 aa10.69□□□□□ -0.7
LINC00408-201ENST00000447784 TMEM200CA6NKL6 621 aa10.69□□□□□ -0.7
LINC00408-201ENST00000447784 TP53I11O14683 189 aa10.69□□□□□ -0.7
LINC00408-201ENST00000447784 TO15178 435 aa10.69□□□□□ -0.7
LINC00408-201ENST00000447784 MAN1A2O60476 641 aa10.69□□□□□ -0.7
LINC00408-201ENST00000447784 SORBS2O94875 1100 aaKnown RBP10.69□□□□□ -0.7
LINC00408-201ENST00000447784 NKX2-2O95096 273 aa10.69□□□□□ -0.7
LINC00408-201ENST00000447784 CT45A8P0DMV1 189 aa10.69□□□□□ -0.7
LINC00408-201ENST00000447784 CT45A9P0DMV2 189 aa10.69□□□□□ -0.7
LINC00408-201ENST00000447784 ATP6V1C1P21283 382 aa10.69□□□□□ -0.7
LINC00408-201ENST00000447784 TRHRP34981 398 aaPredicted RBP10.69□□□□□ -0.7
LINC00408-201ENST00000447784 CD97P48960 835 aa10.69□□□□□ -0.7
LINC00408-201ENST00000447784 NUDT2P50583 147 aa10.69□□□□□ -0.7
LINC00408-201ENST00000447784 HLCSP50747 726 aa10.69□□□□□ -0.7
LINC00408-201ENST00000447784 CASP9P55211 416 aa10.69□□□□□ -0.7
LINC00408-201ENST00000447784 POU6F2P78424 691 aaPredicted RBP10.69□□□□□ -0.7
LINC00408-201ENST00000447784 HPCAP84074 193 aa10.69□□□□□ -0.7
LINC00408-201ENST00000447784 PSG6Q00889 435 aa10.69□□□□□ -0.7
LINC00408-201ENST00000447784 CAPRIN1Q14444 709 aaKnown RBP10.69□□□□□ -0.7
LINC00408-201ENST00000447784 DUSP5Q16690 384 aa10.69□□□□□ -0.7
LINC00408-201ENST00000447784 CT45A2Q5DJT8 189 aa10.69□□□□□ -0.7
LINC00408-201ENST00000447784 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.69□□□□□ -0.7
LINC00408-201ENST00000447784 SLC6A19Q695T7 634 aa10.69□□□□□ -0.7
LINC00408-201ENST00000447784 TNFAIP8L2Q6P589 184 aaPredicted RBP10.69□□□□□ -0.7
LINC00408-201ENST00000447784 DLEU7Q6UYE1 221 aa10.69□□□□□ -0.7
LINC00408-201ENST00000447784 C16orf62Q7Z3J2 963 aa10.69□□□□□ -0.7
LINC00408-201ENST00000447784 ARPINQ7Z6K5 226 aa10.69□□□□□ -0.7
LINC00408-201ENST00000447784 PRR22Q8IZ63 422 aa10.69□□□□□ -0.7
LINC00408-201ENST00000447784 SLC34A3Q8N130 599 aa10.69□□□□□ -0.7
LINC00408-201ENST00000447784 OR52N2Q8NGI0 321 aa10.69□□□□□ -0.7
LINC00408-201ENST00000447784 MIPOL1Q8TD10 442 aa10.69□□□□□ -0.7
LINC00408-201ENST00000447784 TMBIM1Q969X1 311 aa10.69□□□□□ -0.7
LINC00408-201ENST00000447784 TMEM125Q96AQ2 219 aa10.69□□□□□ -0.7
LINC00408-201ENST00000447784 OMA1Q96E52 524 aa10.69□□□□□ -0.7
LINC00408-201ENST00000447784 GIMAP5Q96F15 307 aa10.69□□□□□ -0.7
LINC00408-201ENST00000447784 OTUB1Q96FW1 271 aaPredicted RBP10.69□□□□□ -0.7
LINC00408-201ENST00000447784 RMND5BQ96G75 393 aaPredicted RBP10.69□□□□□ -0.7
LINC00408-201ENST00000447784 AURKBQ96GD4 344 aaPredicted RBP10.69□□□□□ -0.7
LINC00408-201ENST00000447784 OR7D2Q96RA2 312 aa10.69□□□□□ -0.7
LINC00408-201ENST00000447784 HOPXQ9BPY8 73 aaPredicted RBP10.69□□□□□ -0.7
LINC00408-201ENST00000447784 G6PC3Q9BUM1 346 aa10.69□□□□□ -0.7
LINC00408-201ENST00000447784 BTBD2Q9BX70 525 aa10.69□□□□□ -0.7
LINC00408-201ENST00000447784 RNF32Q9H0A6 362 aa10.69□□□□□ -0.7
LINC00408-201ENST00000447784 SLC6A13Q9NSD5 602 aa10.69□□□□□ -0.7
LINC00408-201ENST00000447784 ARL8BQ9NVJ2 186 aa10.69□□□□□ -0.7
LINC00408-201ENST00000447784 NDE1Q9NXR1 346 aa10.69□□□□□ -0.7
LINC00408-201ENST00000447784 ANKRD10Q9NXR5 420 aa10.69□□□□□ -0.7
LINC00408-201ENST00000447784 PLA2G3Q9NZ20 509 aa10.69□□□□□ -0.7
LINC00408-201ENST00000447784 VAPAQ9P0L0 249 aa10.69□□□□□ -0.7
LINC00408-201ENST00000447784 L3MBTL1Q9Y468 752 aa10.69□□□□□ -0.7
LINC00408-201ENST00000447784 NPFFR2Q9Y5X5 522 aa10.69□□□□□ -0.7
LINC00408-201ENST00000447784 OR5H15A6NDH6 313 aa10.68□□□□□ -0.7
LINC00408-201ENST00000447784 CCT8L1PA6NM43 557 aa10.68□□□□□ -0.7
LINC00408-201ENST00000447784 TTLL8A6PVC2 850 aa10.68□□□□□ -0.7
LINC00408-201ENST00000447784 PYCARD-AS1I3L0S3 204 aa10.68□□□□□ -0.7
LINC00408-201ENST00000447784 ASNA1O43681 348 aa10.68□□□□□ -0.7
LINC00408-201ENST00000447784 OR6B1O95007 311 aa10.68□□□□□ -0.7
LINC00408-201ENST00000447784 WDPCPO95876 746 aa10.68□□□□□ -0.7
LINC00408-201ENST00000447784 AK1P00568 194 aa10.68□□□□□ -0.7
LINC00408-201ENST00000447784 F10P00742 488 aa10.68□□□□□ -0.7
LINC00408-201ENST00000447784 FBXO45P0C2W1 286 aa10.68□□□□□ -0.7
LINC00408-201ENST00000447784 OR12D1P0DN82 309 aa10.68□□□□□ -0.7
LINC00408-201ENST00000447784 ACP2P11117 423 aa10.68□□□□□ -0.7
LINC00408-201ENST00000447784 CD46P15529 392 aa10.68□□□□□ -0.7
LINC00408-201ENST00000447784 CALB2P22676 271 aa10.68□□□□□ -0.7
LINC00408-201ENST00000447784 ABCD3P28288 659 aa10.68□□□□□ -0.7
LINC00408-201ENST00000447784 PTPN6P29350 595 aa10.68□□□□□ -0.7
LINC00408-201ENST00000447784 CD96P40200 585 aa10.68□□□□□ -0.7
LINC00408-201ENST00000447784 SOX3P41225 446 aa10.68□□□□□ -0.7
LINC00408-201ENST00000447784 CPA2P48052 419 aa10.68□□□□□ -0.7
LINC00408-201ENST00000447784 CLK3P49761 638 aaKnown RBP10.68□□□□□ -0.7
LINC00408-201ENST00000447784 DSTNP60981 165 aa10.68□□□□□ -0.7
LINC00408-201ENST00000447784 FADDQ13158 208 aa10.68□□□□□ -0.7
LINC00408-201ENST00000447784 TUBA3CQ13748 450 aa10.68□□□□□ -0.7
LINC00408-201ENST00000447784 EFR3AQ14156 821 aa10.68□□□□□ -0.7
LINC00408-201ENST00000447784 GNA13Q14344 377 aa10.68□□□□□ -0.7
LINC00408-201ENST00000447784 RGNQ15493 299 aa10.68□□□□□ -0.7
LINC00408-201ENST00000447784 RUNDC3AQ59EK9 446 aa10.68□□□□□ -0.7
LINC00408-201ENST00000447784 TUBA3EQ6PEY2 450 aa10.68□□□□□ -0.7
LINC00408-201ENST00000447784 IL20RBQ6UXL0 311 aa10.68□□□□□ -0.7
LINC00408-201ENST00000447784 NPSR1Q6W5P4 371 aa10.68□□□□□ -0.7
LINC00408-201ENST00000447784 RTL4Q6ZR62 310 aa10.68□□□□□ -0.7
LINC00408-201ENST00000447784 NUP54Q7Z3B4 507 aa10.68□□□□□ -0.7
LINC00408-201ENST00000447784 CYP4Z2PQ8N1L4 340 aa10.68□□□□□ -0.7
LINC00408-201ENST00000447784 Q8NA96 180 aa10.68□□□□□ -0.7
LINC00408-201ENST00000447784 FAM13CQ8NE31 585 aa10.68□□□□□ -0.7
LINC00408-201ENST00000447784 OR8J3Q8NGG0 315 aa10.68□□□□□ -0.7
LINC00408-201ENST00000447784 OR5D16Q8NGK9 328 aa10.68□□□□□ -0.7
LINC00408-201ENST00000447784 OR5M3Q8NGP4 307 aa10.68□□□□□ -0.7
LINC00408-201ENST00000447784 PIK3R3Q92569 461 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms