RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 EXTL1Q92935 676 aa16.6■□□□□ 0.25
TRAPPC4-203ENST00000447216 MAL2Q969L2 176 aa16.6■□□□□ 0.25
TRAPPC4-203ENST00000447216 OMA1Q96E52 524 aa16.6■□□□□ 0.25
TRAPPC4-203ENST00000447216 HSPBAP1Q96EW2 488 aa16.6■□□□□ 0.25
TRAPPC4-203ENST00000447216 CDRT15Q96T59 188 aa16.6■□□□□ 0.25
TRAPPC4-203ENST00000447216 SH3GL1Q99961 368 aa16.6■□□□□ 0.25
TRAPPC4-203ENST00000447216 ECSITQ9BQ95 431 aa16.6■□□□□ 0.25
TRAPPC4-203ENST00000447216 BTBD2Q9BX70 525 aa16.6■□□□□ 0.25
TRAPPC4-203ENST00000447216 ZNF552Q9H707 407 aaPredicted RBP16.6■□□□□ 0.25
TRAPPC4-203ENST00000447216 FBXO34Q9NWN3 711 aa16.6■□□□□ 0.25
TRAPPC4-203ENST00000447216 YARS2Q9Y2Z4 477 aaKnown RBP16.6■□□□□ 0.25
TRAPPC4-203ENST00000447216 DSPP15924 2871 aaKnown RBP16.59■□□□□ 0.25
TRAPPC4-203ENST00000447216 DUXAA6NLW8 204 aa16.59■□□□□ 0.25
TRAPPC4-203ENST00000447216 ACOX3O15254 700 aa16.59■□□□□ 0.25
TRAPPC4-203ENST00000447216 ASNA1O43681 348 aa16.59■□□□□ 0.25
TRAPPC4-203ENST00000447216 REM1O75628 298 aa16.59■□□□□ 0.25
TRAPPC4-203ENST00000447216 OR6B1O95007 311 aa16.59■□□□□ 0.25
TRAPPC4-203ENST00000447216 KCNK2O95069 426 aa16.59■□□□□ 0.25
TRAPPC4-203ENST00000447216 F10P00742 488 aa16.59■□□□□ 0.25
TRAPPC4-203ENST00000447216 ALPPP05187 535 aa16.59■□□□□ 0.25
TRAPPC4-203ENST00000447216 BMP2P12643 396 aa16.59■□□□□ 0.25
TRAPPC4-203ENST00000447216 ABCD3P28288 659 aa16.59■□□□□ 0.25
TRAPPC4-203ENST00000447216 PIGAP37287 484 aa16.59■□□□□ 0.25
TRAPPC4-203ENST00000447216 SOX3P41225 446 aa16.59■□□□□ 0.25
TRAPPC4-203ENST00000447216 SSR4P51571 173 aa16.59■□□□□ 0.25
TRAPPC4-203ENST00000447216 NRG3P56975 720 aa16.59■□□□□ 0.25
TRAPPC4-203ENST00000447216 NCALDP61601 193 aa16.59■□□□□ 0.25
TRAPPC4-203ENST00000447216 LIPEQ05469 1076 aa16.59■□□□□ 0.25
TRAPPC4-203ENST00000447216 CRB2Q5IJ48 1285 aa16.59■□□□□ 0.25
TRAPPC4-203ENST00000447216 DCST2Q5T1A1 773 aa16.59■□□□□ 0.25
TRAPPC4-203ENST00000447216 ATAD3BQ5T9A4 648 aa16.59■□□□□ 0.25
TRAPPC4-203ENST00000447216 ZNF468Q5VIY5 522 aaPredicted RBP16.59■□□□□ 0.25
TRAPPC4-203ENST00000447216 ABHD17BQ5VST6 288 aa16.59■□□□□ 0.25
TRAPPC4-203ENST00000447216 AGAP7PQ5VUJ5 663 aa16.59■□□□□ 0.25
TRAPPC4-203ENST00000447216 DESI1Q6ICB0 168 aa16.59■□□□□ 0.25
TRAPPC4-203ENST00000447216 C19orf48Q6RUI8 117 aa16.59■□□□□ 0.25
TRAPPC4-203ENST00000447216 LYPD8Q6UX82 237 aa16.59■□□□□ 0.25
TRAPPC4-203ENST00000447216 C16orf62Q7Z3J2 963 aa16.59■□□□□ 0.25
TRAPPC4-203ENST00000447216 ZAR1Q86SH2 424 aa16.59■□□□□ 0.25
TRAPPC4-203ENST00000447216 IFNEQ86WN2 208 aa16.59■□□□□ 0.25
TRAPPC4-203ENST00000447216 CALHM3Q86XJ0 350 aa16.59■□□□□ 0.25
TRAPPC4-203ENST00000447216 PTOV1Q86YD1 416 aa16.59■□□□□ 0.25
TRAPPC4-203ENST00000447216 TAGAPQ8N103 731 aa16.59■□□□□ 0.25
TRAPPC4-203ENST00000447216 RNF148Q8N7C7 305 aa16.59■□□□□ 0.25
TRAPPC4-203ENST00000447216 ANKFN1Q8N957 763 aa16.59■□□□□ 0.25
TRAPPC4-203ENST00000447216 SNRNP27Q8WVK2 155 aaKnown RBP16.59■□□□□ 0.25
TRAPPC4-203ENST00000447216 EFHD2Q96C19 240 aaPredicted RBP16.59■□□□□ 0.25
TRAPPC4-203ENST00000447216 AGAP4Q96P64 663 aa16.59■□□□□ 0.25
TRAPPC4-203ENST00000447216 ZBTB20Q9HC78 741 aaPredicted RBP16.59■□□□□ 0.25
TRAPPC4-203ENST00000447216 SPAG4Q9NPE6 437 aa16.59■□□□□ 0.25
TRAPPC4-203ENST00000447216 EXD2Q9NVH0 621 aa16.59■□□□□ 0.25
TRAPPC4-203ENST00000447216 GIN1Q9NXP7 522 aa16.59■□□□□ 0.25
TRAPPC4-203ENST00000447216 NDE1Q9NXR1 346 aa16.59■□□□□ 0.25
TRAPPC4-203ENST00000447216 STMN3Q9NZ72 180 aa16.59■□□□□ 0.25
TRAPPC4-203ENST00000447216 TMEM181Q9P2C4 612 aa16.59■□□□□ 0.25
TRAPPC4-203ENST00000447216 ABCD2Q9UBJ2 740 aa16.59■□□□□ 0.25
TRAPPC4-203ENST00000447216 NPFFR2Q9Y5X5 522 aa16.59■□□□□ 0.25
TRAPPC4-203ENST00000447216 ZZEF1O43149 2961 aa16.59■□□□□ 0.25
TRAPPC4-203ENST00000447216 SLC28A2O43868 658 aa16.58■□□□□ 0.24
TRAPPC4-203ENST00000447216 CEACAM4O75871 244 aa16.58■□□□□ 0.24
TRAPPC4-203ENST00000447216 ATP5HO75947 161 aa16.58■□□□□ 0.24
TRAPPC4-203ENST00000447216 ARAFP10398 606 aa16.58■□□□□ 0.24
TRAPPC4-203ENST00000447216 NR2F1P10589 423 aa16.58■□□□□ 0.24
TRAPPC4-203ENST00000447216 MAGEA8P43361 318 aa16.58■□□□□ 0.24
TRAPPC4-203ENST00000447216 GSK3BP49841 420 aa16.58■□□□□ 0.24
TRAPPC4-203ENST00000447216 TXNL4AP83876 142 aaKnown RBP16.58■□□□□ 0.24
TRAPPC4-203ENST00000447216 MAPK11Q15759 364 aa16.58■□□□□ 0.24
TRAPPC4-203ENST00000447216 ADRM1Q16186 407 aa16.58■□□□□ 0.24
TRAPPC4-203ENST00000447216 DECR1Q16698 335 aa16.58■□□□□ 0.24
TRAPPC4-203ENST00000447216 CYP27C1Q4G0S4 372 aa16.58■□□□□ 0.24
TRAPPC4-203ENST00000447216 GPAT3Q53EU6 434 aa16.58■□□□□ 0.24
TRAPPC4-203ENST00000447216 HEPHL1Q6MZM0 1159 aa16.58■□□□□ 0.24
TRAPPC4-203ENST00000447216 ISLR2Q6UXK2 745 aa16.58■□□□□ 0.24
TRAPPC4-203ENST00000447216 BNC2Q6ZN30 1099 aaPredicted RBP16.58■□□□□ 0.24
TRAPPC4-203ENST00000447216 ZZZ3Q8IYH5 903 aa16.58■□□□□ 0.24
TRAPPC4-203ENST00000447216 OR5M3Q8NGP4 307 aa16.58■□□□□ 0.24
TRAPPC4-203ENST00000447216 NFKBIDQ8NI38 313 aa16.58■□□□□ 0.24
TRAPPC4-203ENST00000447216 ASB15Q8WXK1 588 aa16.58■□□□□ 0.24
TRAPPC4-203ENST00000447216 ZNF583Q96ND8 569 aa16.58■□□□□ 0.24
TRAPPC4-203ENST00000447216 SDF2Q99470 211 aa16.58■□□□□ 0.24
TRAPPC4-203ENST00000447216 ANKRD10Q9NXR5 420 aa16.58■□□□□ 0.24
TRAPPC4-203ENST00000447216 PLA2G3Q9NZ20 509 aa16.58■□□□□ 0.24
TRAPPC4-203ENST00000447216 P2RX2Q9UBL9 471 aa16.58■□□□□ 0.24
TRAPPC4-203ENST00000447216 TEKT2Q9UIF3 430 aa16.58■□□□□ 0.24
TRAPPC4-203ENST00000447216 NPIPA5A0A0B4J1W7 369 aa16.57■□□□□ 0.24
TRAPPC4-203ENST00000447216 NPIPA7E9PJI5 369 aa16.57■□□□□ 0.24
TRAPPC4-203ENST00000447216 GYG2O15488 501 aa16.57■□□□□ 0.24
TRAPPC4-203ENST00000447216 TSPAN2O60636 221 aa16.57■□□□□ 0.24
TRAPPC4-203ENST00000447216 ZIC2O95409 532 aaPredicted RBP16.57■□□□□ 0.24
TRAPPC4-203ENST00000447216 AGR2O95994 175 aa16.57■□□□□ 0.24
TRAPPC4-203ENST00000447216 BCHEP06276 602 aa16.57■□□□□ 0.24
TRAPPC4-203ENST00000447216 CHRM4P08173 479 aa16.57■□□□□ 0.24
TRAPPC4-203ENST00000447216 NPIPA8P0DM63 369 aa16.57■□□□□ 0.24
TRAPPC4-203ENST00000447216 EEFSECP57772 596 aaKnown RBP16.57■□□□□ 0.24
TRAPPC4-203ENST00000447216 FBXW4P57775 412 aa16.57■□□□□ 0.24
TRAPPC4-203ENST00000447216 ARHGAP11BQ3KRB8 267 aa16.57■□□□□ 0.24
TRAPPC4-203ENST00000447216 RPS26P11Q5JNZ5 115 aaPredicted RBP16.57■□□□□ 0.24
TRAPPC4-203ENST00000447216 IL20RBQ6UXL0 311 aa16.57■□□□□ 0.24
TRAPPC4-203ENST00000447216 NET1Q7Z628 596 aaPredicted RBP16.57■□□□□ 0.24
TRAPPC4-203ENST00000447216 TMEM156Q8N614 296 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms