RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 STAT5AP42229 794 aa17.9■□□□□ 0.46
SDCBP-204ENST00000447182 C19orf57Q0VDD7 668 aa17.9■□□□□ 0.46
SDCBP-204ENST00000447182 MAP4K2Q12851 820 aa17.9■□□□□ 0.46
SDCBP-204ENST00000447182 WSCD2Q2TBF2 565 aa17.9■□□□□ 0.46
SDCBP-204ENST00000447182 TMEM35AQ53FP2 167 aa17.9■□□□□ 0.46
SDCBP-204ENST00000447182 GLCCI1Q86VQ1 547 aa17.9■□□□□ 0.46
SDCBP-204ENST00000447182 OR4F15Q8NGB8 312 aa17.9■□□□□ 0.46
SDCBP-204ENST00000447182 OR56A1Q8NGH5 318 aa17.9■□□□□ 0.46
SDCBP-204ENST00000447182 PIGXQ8TBF5 258 aa17.9■□□□□ 0.46
SDCBP-204ENST00000447182 C17orf62Q9BQA9 187 aa17.9■□□□□ 0.46
SDCBP-204ENST00000447182 YIPF4Q9BSR8 244 aa17.9■□□□□ 0.46
SDCBP-204ENST00000447182 TEX12Q9BXU0 123 aa17.9■□□□□ 0.46
SDCBP-204ENST00000447182 AICDAQ9GZX7 198 aa17.9■□□□□ 0.46
SDCBP-204ENST00000447182 MALT1Q9UDY8 824 aa17.9■□□□□ 0.46
SDCBP-204ENST00000447182 HCFC2Q9Y5Z7 792 aa17.9■□□□□ 0.46
SDCBP-204ENST00000447182 A0A0G2JN53 185 aa17.9■□□□□ 0.46
SDCBP-204ENST00000447182 WASHC1A8K0Z3 465 aa17.9■□□□□ 0.46
SDCBP-204ENST00000447182 ERVH48-1M5A8F1 160 aa17.9■□□□□ 0.46
SDCBP-204ENST00000447182 PPM1DO15297 605 aa17.9■□□□□ 0.46
SDCBP-204ENST00000447182 FPR3P25089 353 aa17.9■□□□□ 0.46
SDCBP-204ENST00000447182 PRKAG1P54619 331 aa17.9■□□□□ 0.46
SDCBP-204ENST00000447182 RRAS2P62070 204 aaPredicted RBP17.9■□□□□ 0.46
SDCBP-204ENST00000447182 CCDC58Q4VC31 144 aa17.9■□□□□ 0.46
SDCBP-204ENST00000447182 ZNF311Q5JNZ3 666 aa17.9■□□□□ 0.46
SDCBP-204ENST00000447182 EOGTQ5NDL2 527 aa17.9■□□□□ 0.46
SDCBP-204ENST00000447182 C9orf64Q5T6V5 341 aa17.9■□□□□ 0.46
SDCBP-204ENST00000447182 VASNQ6EMK4 673 aa17.9■□□□□ 0.46
SDCBP-204ENST00000447182 ADAMTSL4Q6UY14 1074 aa17.9■□□□□ 0.46
SDCBP-204ENST00000447182 WASH2PQ6VEQ5 465 aa17.9■□□□□ 0.46
SDCBP-204ENST00000447182 ACOT12Q8WYK0 555 aa17.9■□□□□ 0.46
SDCBP-204ENST00000447182 OR8D1Q8WZ84 308 aa17.9■□□□□ 0.46
SDCBP-204ENST00000447182 FAM46AQ96IP4 442 aaKnown RBP17.9■□□□□ 0.46
SDCBP-204ENST00000447182 UBL7Q96S82 380 aaPredicted RBP17.9■□□□□ 0.46
SDCBP-204ENST00000447182 RNF32Q9H0A6 362 aa17.9■□□□□ 0.46
SDCBP-204ENST00000447182 TRIM45Q9H8W5 580 aaPredicted RBP17.9■□□□□ 0.46
SDCBP-204ENST00000447182 TBC1D17Q9HA65 648 aa17.9■□□□□ 0.46
SDCBP-204ENST00000447182 SEMA4GQ9NTN9 838 aa17.9■□□□□ 0.46
SDCBP-204ENST00000447182 PRKAG2Q9UGJ0 569 aa17.9■□□□□ 0.46
SDCBP-204ENST00000447182 SLC27A6Q9Y2P4 619 aa17.9■□□□□ 0.46
SDCBP-204ENST00000447182 CLCA3PQ9Y6N3 262 aa17.9■□□□□ 0.46
SDCBP-204ENST00000447182 EFCAB14O75071 495 aa17.89■□□□□ 0.45
SDCBP-204ENST00000447182 CPNE3O75131 537 aaKnown RBP17.89■□□□□ 0.45
SDCBP-204ENST00000447182 MYCP01106 439 aaPredicted RBP17.89■□□□□ 0.45
SDCBP-204ENST00000447182 HTR1FP30939 366 aa17.89■□□□□ 0.45
SDCBP-204ENST00000447182 TRIM23P36406 574 aa17.89■□□□□ 0.45
SDCBP-204ENST00000447182 AVPR1BP47901 424 aa17.89■□□□□ 0.45
SDCBP-204ENST00000447182 ARFIP1P53367 373 aa17.89■□□□□ 0.45
SDCBP-204ENST00000447182 CLEC12AQ5QGZ9 265 aa17.89■□□□□ 0.45
SDCBP-204ENST00000447182 ABI3BPQ7Z7G0 1075 aa17.89■□□□□ 0.45
SDCBP-204ENST00000447182 LRRTM4Q86VH4 590 aa17.89■□□□□ 0.45
SDCBP-204ENST00000447182 LINC01555Q8NAE3 123 aa17.89■□□□□ 0.45
SDCBP-204ENST00000447182 TTLQ8NG68 377 aa17.89■□□□□ 0.45
SDCBP-204ENST00000447182 OR4Q3Q8NH05 313 aa17.89■□□□□ 0.45
SDCBP-204ENST00000447182 PRR14Q9BWN1 585 aa17.89■□□□□ 0.45
SDCBP-204ENST00000447182 QRSL1Q9H0R6 528 aaKnown RBP17.89■□□□□ 0.45
SDCBP-204ENST00000447182 SLC38A1Q9H2H9 487 aa17.89■□□□□ 0.45
SDCBP-204ENST00000447182 CDH10Q9Y6N8 788 aa17.89■□□□□ 0.45
SDCBP-204ENST00000447182 NOTCH4Q99466 2003 aa17.89■□□□□ 0.45
SDCBP-204ENST00000447182 NCR1O76036 304 aa17.89■□□□□ 0.45
SDCBP-204ENST00000447182 GNSP15586 552 aa17.89■□□□□ 0.45
SDCBP-204ENST00000447182 ARSBP15848 533 aa17.89■□□□□ 0.45
SDCBP-204ENST00000447182 IFNA8P32881 189 aa17.89■□□□□ 0.45
SDCBP-204ENST00000447182 RAB25P57735 213 aa17.89■□□□□ 0.45
SDCBP-204ENST00000447182 BDH1Q02338 343 aa17.89■□□□□ 0.45
SDCBP-204ENST00000447182 MLLT1Q03111 559 aaPredicted RBP17.89■□□□□ 0.45
SDCBP-204ENST00000447182 ADAM15Q13444 863 aa17.89■□□□□ 0.45
SDCBP-204ENST00000447182 SLC9A5Q14940 896 aa17.89■□□□□ 0.45
SDCBP-204ENST00000447182 DECR1Q16698 335 aa17.89■□□□□ 0.45
SDCBP-204ENST00000447182 HNRNPA1L2Q32P51 320 aaKnown RBP17.89■□□□□ 0.45
SDCBP-204ENST00000447182 KIAA1161Q6NSJ0 714 aa17.89■□□□□ 0.45
SDCBP-204ENST00000447182 SLC39A5Q6ZMH5 540 aa17.89■□□□□ 0.45
SDCBP-204ENST00000447182 RRM2BQ7LG56 351 aa17.89■□□□□ 0.45
SDCBP-204ENST00000447182 CADM2Q8N3J6 435 aa17.89■□□□□ 0.45
SDCBP-204ENST00000447182 CREB3L1Q96BA8 519 aa17.89■□□□□ 0.45
SDCBP-204ENST00000447182 OTULINQ96BN8 352 aa17.89■□□□□ 0.45
SDCBP-204ENST00000447182 TOX2Q96NM4 488 aa17.89■□□□□ 0.45
SDCBP-204ENST00000447182 KCNE3Q9Y6H6 103 aa17.89■□□□□ 0.45
SDCBP-204ENST00000447182 DNMT3AQ9Y6K1 912 aaPredicted RBP17.89■□□□□ 0.45
SDCBP-204ENST00000447182 KLF4O43474 513 aa17.88■□□□□ 0.45
SDCBP-204ENST00000447182 ADH5P11766 374 aa17.88■□□□□ 0.45
SDCBP-204ENST00000447182 FZD5Q13467 585 aa17.88■□□□□ 0.45
SDCBP-204ENST00000447182 SLC30A6Q6NXT4 461 aa17.88■□□□□ 0.45
SDCBP-204ENST00000447182 TMEM91Q6ZNR0 172 aa17.88■□□□□ 0.45
SDCBP-204ENST00000447182 C12orf40Q86WS4 652 aa17.88■□□□□ 0.45
SDCBP-204ENST00000447182 SPRYD4Q8WW59 207 aaPredicted RBP17.88■□□□□ 0.45
SDCBP-204ENST00000447182 ACOT11Q8WXI4 607 aaPredicted RBP17.88■□□□□ 0.45
SDCBP-204ENST00000447182 ZSWIM3Q96MP5 696 aa17.88■□□□□ 0.45
SDCBP-204ENST00000447182 CREBZFQ9NS37 354 aa17.88■□□□□ 0.45
SDCBP-204ENST00000447182 SLC13A4Q9UKG4 626 aa17.88■□□□□ 0.45
SDCBP-204ENST00000447182 TBX21Q9UL17 535 aa17.88■□□□□ 0.45
SDCBP-204ENST00000447182 CBLCQ9ULV8 474 aa17.88■□□□□ 0.45
SDCBP-204ENST00000447182 GPR55Q9Y2T6 319 aaPredicted RBP17.88■□□□□ 0.45
SDCBP-204ENST00000447182 DENND4AQ7Z401 1863 aa17.87■□□□□ 0.45
SDCBP-204ENST00000447182 IGKV1-8A0A0C4DH67 115 aa17.87■□□□□ 0.45
SDCBP-204ENST00000447182 A0A0G2JMP0 313 aa17.87■□□□□ 0.45
SDCBP-204ENST00000447182 EDDM13A0A1B0GTR0 161 aa17.87■□□□□ 0.45
SDCBP-204ENST00000447182 CPSF4LA6NMK7 179 aaKnown RBP17.87■□□□□ 0.45
SDCBP-204ENST00000447182 NDUFB5O43674 189 aa17.87■□□□□ 0.45
SDCBP-204ENST00000447182 PRKRAO75569 313 aaKnown RBP17.87■□□□□ 0.45
SDCBP-204ENST00000447182 SERPIND1P05546 499 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms