RNA–Protein interactions for RNA: ENST00000445623.1

TIMP1-204, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2

Gene TIMP1, Length 595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-204ENST00000445623 PGAM4Q8N0Y7 254 aa12.16□□□□□ -0.46
TIMP1-204ENST00000445623 PIK3R3Q92569 461 aa12.16□□□□□ -0.46
TIMP1-204ENST00000445623 TMBIM1Q969X1 311 aa12.16□□□□□ -0.46
TIMP1-204ENST00000445623 SPACA9Q96E40 222 aaPredicted RBP12.16□□□□□ -0.46
TIMP1-204ENST00000445623 OMA1Q96E52 524 aa12.16□□□□□ -0.46
TIMP1-204ENST00000445623 OTUB1Q96FW1 271 aaPredicted RBP12.16□□□□□ -0.46
TIMP1-204ENST00000445623 SLC35A4Q96G79 324 aa12.16□□□□□ -0.46
TIMP1-204ENST00000445623 SMAD5Q99717 465 aaKnown RBP12.16□□□□□ -0.46
TIMP1-204ENST00000445623 ECSITQ9BQ95 431 aa12.16□□□□□ -0.46
TIMP1-204ENST00000445623 GPATCH1Q9BRR8 931 aaKnown RBP12.16□□□□□ -0.46
TIMP1-204ENST00000445623 UTP23Q9BRU9 249 aaKnown RBP12.16□□□□□ -0.46
TIMP1-204ENST00000445623 SPATA9Q9BWV2 254 aa12.16□□□□□ -0.46
TIMP1-204ENST00000445623 RNF32Q9H0A6 362 aa12.16□□□□□ -0.46
TIMP1-204ENST00000445623 ADNPQ9H2P0 1102 aa12.16□□□□□ -0.46
TIMP1-204ENST00000445623 SERHL2Q9H4I8 314 aa12.16□□□□□ -0.46
TIMP1-204ENST00000445623 SPAG4Q9NPE6 437 aa12.16□□□□□ -0.46
TIMP1-204ENST00000445623 HPF1Q9NWY4 346 aa12.16□□□□□ -0.46
TIMP1-204ENST00000445623 TUBD1Q9UJT1 453 aa12.16□□□□□ -0.46
TIMP1-204ENST00000445623 LIPT1Q9Y234 373 aa12.16□□□□□ -0.46
TIMP1-204ENST00000445623 ZNF451Q9Y4E5 1061 aa12.16□□□□□ -0.46
TIMP1-204ENST00000445623 TPRP12270 2363 aaKnown RBP12.15□□□□□ -0.46
TIMP1-204ENST00000445623 HMGN4O00479 90 aa12.15□□□□□ -0.46
TIMP1-204ENST00000445623 TP53I11O14683 189 aa12.15□□□□□ -0.46
TIMP1-204ENST00000445623 REM1O75628 298 aa12.15□□□□□ -0.46
TIMP1-204ENST00000445623 PPM1BO75688 479 aa12.15□□□□□ -0.46
TIMP1-204ENST00000445623 KCNK2O95069 426 aa12.15□□□□□ -0.46
TIMP1-204ENST00000445623 NADKO95544 446 aaPredicted RBP12.15□□□□□ -0.46
TIMP1-204ENST00000445623 FBXO45P0C2W1 286 aa12.15□□□□□ -0.46
TIMP1-204ENST00000445623 BMP2P12643 396 aa12.15□□□□□ -0.46
TIMP1-204ENST00000445623 ETFAP13804 333 aa12.15□□□□□ -0.46
TIMP1-204ENST00000445623 SLC6A2P23975 617 aa12.15□□□□□ -0.46
TIMP1-204ENST00000445623 LCN1P31025 176 aa12.15□□□□□ -0.46
TIMP1-204ENST00000445623 SOX3P41225 446 aa12.15□□□□□ -0.46
TIMP1-204ENST00000445623 RFX3P48380 749 aa12.15□□□□□ -0.46
TIMP1-204ENST00000445623 HLCSP50747 726 aa12.15□□□□□ -0.46
TIMP1-204ENST00000445623 MVDP53602 400 aa12.15□□□□□ -0.46
TIMP1-204ENST00000445623 PNLIPRP2P54317 469 aa12.15□□□□□ -0.46
TIMP1-204ENST00000445623 PSME3P61289 254 aa12.15□□□□□ -0.46
TIMP1-204ENST00000445623 ARG2P78540 354 aa12.15□□□□□ -0.46
TIMP1-204ENST00000445623 OC90Q02509 493 aaPredicted RBP12.15□□□□□ -0.46
TIMP1-204ENST00000445623 CYP51A1Q16850 503 aa12.15□□□□□ -0.46
TIMP1-204ENST00000445623 DCST2Q5T1A1 773 aa12.15□□□□□ -0.46
TIMP1-204ENST00000445623 C19orf48Q6RUI8 117 aa12.15□□□□□ -0.46
TIMP1-204ENST00000445623 C16orf47Q6ZP98 133 aaPredicted RBP12.15□□□□□ -0.46
TIMP1-204ENST00000445623 CCDC121Q6ZUS5 278 aa12.15□□□□□ -0.46
TIMP1-204ENST00000445623 SERPINA11Q86U17 422 aa12.15□□□□□ -0.46
TIMP1-204ENST00000445623 PRR22Q8IZ63 422 aa12.15□□□□□ -0.46
TIMP1-204ENST00000445623 METTL25Q8N6Q8 603 aa12.15□□□□□ -0.46
TIMP1-204ENST00000445623 BCORP1Q8N888 145 aa12.15□□□□□ -0.46
TIMP1-204ENST00000445623 RAB8BQ92930 207 aa12.15□□□□□ -0.46
TIMP1-204ENST00000445623 SGCZQ96LD1 299 aa12.15□□□□□ -0.46
TIMP1-204ENST00000445623 C1orf21Q9H246 121 aa12.15□□□□□ -0.46
TIMP1-204ENST00000445623 KAT8Q9H7Z6 458 aaKnown RBP12.15□□□□□ -0.46
TIMP1-204ENST00000445623 CALML5Q9NZT1 146 aa12.15□□□□□ -0.46
TIMP1-204ENST00000445623 GXYLT2A0PJZ3 443 aa12.14□□□□□ -0.47
TIMP1-204ENST00000445623 OR5H15A6NDH6 313 aa12.14□□□□□ -0.47
TIMP1-204ENST00000445623 OR6C70A6NIJ9 312 aa12.14□□□□□ -0.47
TIMP1-204ENST00000445623 C5orf58C9J3I9 102 aa12.14□□□□□ -0.47
TIMP1-204ENST00000445623 MAN1A2O60476 641 aa12.14□□□□□ -0.47
TIMP1-204ENST00000445623 DNAJA2O60884 412 aa12.14□□□□□ -0.47
TIMP1-204ENST00000445623 IL33O95760 270 aa12.14□□□□□ -0.47
TIMP1-204ENST00000445623 T-ENOLP0DO92 83 aa12.14□□□□□ -0.47
TIMP1-204ENST00000445623 NR2F1P10589 423 aa12.14□□□□□ -0.47
TIMP1-204ENST00000445623 SLC7A2P52569 658 aa12.14□□□□□ -0.47
TIMP1-204ENST00000445623 CRISP3P54108 245 aa12.14□□□□□ -0.47
TIMP1-204ENST00000445623 SLC25A3Q00325 362 aa12.14□□□□□ -0.47
TIMP1-204ENST00000445623 RBBP4Q09028 425 aa12.14□□□□□ -0.47
TIMP1-204ENST00000445623 BNIP1Q12981 228 aa12.14□□□□□ -0.47
TIMP1-204ENST00000445623 KCNAB2Q13303 367 aa12.14□□□□□ -0.47
TIMP1-204ENST00000445623 NTRK2Q16620 822 aa12.14□□□□□ -0.47
TIMP1-204ENST00000445623 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.14□□□□□ -0.47
TIMP1-204ENST00000445623 ZNF630Q2M218 657 aaPredicted RBP12.14□□□□□ -0.47
TIMP1-204ENST00000445623 COL28A1Q2UY09 1125 aa12.14□□□□□ -0.47
TIMP1-204ENST00000445623 ARHGAP11BQ3KRB8 267 aa12.14□□□□□ -0.47
TIMP1-204ENST00000445623 GPAT3Q53EU6 434 aa12.14□□□□□ -0.47
TIMP1-204ENST00000445623 RABL3Q5HYI8 236 aa12.14□□□□□ -0.47
TIMP1-204ENST00000445623 HEPHL1Q6MZM0 1159 aa12.14□□□□□ -0.47
TIMP1-204ENST00000445623 C8orf82Q6P1X6 216 aaPredicted RBP12.14□□□□□ -0.47
TIMP1-204ENST00000445623 ERICH5Q6P6B1 374 aa12.14□□□□□ -0.47
TIMP1-204ENST00000445623 IGFL2Q6UWQ7 119 aa12.14□□□□□ -0.47
TIMP1-204ENST00000445623 RTL4Q6ZR62 310 aa12.14□□□□□ -0.47
TIMP1-204ENST00000445623 NUP54Q7Z3B4 507 aa12.14□□□□□ -0.47
TIMP1-204ENST00000445623 SLC30A8Q8IWU4 369 aa12.14□□□□□ -0.47
TIMP1-204ENST00000445623 CYP4Z2PQ8N1L4 340 aa12.14□□□□□ -0.47
TIMP1-204ENST00000445623 ZADH2Q8N4Q0 377 aa12.14□□□□□ -0.47
TIMP1-204ENST00000445623 C11orf65Q8NCR3 313 aa12.14□□□□□ -0.47
TIMP1-204ENST00000445623 RBM15BQ8NDT2 890 aaKnown RBP12.14□□□□□ -0.47
TIMP1-204ENST00000445623 CHDHQ8NE62 594 aaPredicted RBP12.14□□□□□ -0.47
TIMP1-204ENST00000445623 OR4N2Q8NGD1 307 aa12.14□□□□□ -0.47
TIMP1-204ENST00000445623 OR10A6Q8NH74 314 aa12.14□□□□□ -0.47
TIMP1-204ENST00000445623 DIO2Q92813 273 aa12.14□□□□□ -0.47
TIMP1-204ENST00000445623 HAS2Q92819 552 aa12.14□□□□□ -0.47
TIMP1-204ENST00000445623 TMEM125Q96AQ2 219 aa12.14□□□□□ -0.47
TIMP1-204ENST00000445623 TMCO6Q96DC7 493 aa12.14□□□□□ -0.47
TIMP1-204ENST00000445623 CRELD1Q96HD1 420 aa12.14□□□□□ -0.47
TIMP1-204ENST00000445623 COL21A1Q96P44 957 aa12.14□□□□□ -0.47
TIMP1-204ENST00000445623 TRNT1Q96Q11 434 aaKnown RBP12.14□□□□□ -0.47
TIMP1-204ENST00000445623 IKZF5Q9H5V7 419 aa12.14□□□□□ -0.47
TIMP1-204ENST00000445623 TMEM38AQ9H6F2 299 aa12.14□□□□□ -0.47
TIMP1-204ENST00000445623 CACYBPQ9HB71 228 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms