RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 SECISBP2Q96T21 854 aaKnown RBP15.82■□□□□ 0.12
PMS1-213ENST00000441310 POLR2J3Q9H1A7 115 aaKnown RBP15.82■□□□□ 0.12
PMS1-213ENST00000441310 P2RY12Q9H244 342 aa15.82■□□□□ 0.12
PMS1-213ENST00000441310 GATBO75879 557 aaKnown RBP15.81■□□□□ 0.12
PMS1-213ENST00000441310 SIX6O95475 246 aa15.81■□□□□ 0.12
PMS1-213ENST00000441310 HMGN1P05114 100 aa15.81■□□□□ 0.12
PMS1-213ENST00000441310 H2AFB2P0C5Z0 115 aa15.81■□□□□ 0.12
PMS1-213ENST00000441310 CXCL2P19875 107 aa15.81■□□□□ 0.12
PMS1-213ENST00000441310 HLA-FP30511 346 aa15.81■□□□□ 0.12
PMS1-213ENST00000441310 GSG1Q2KHT4 349 aa15.81■□□□□ 0.12
PMS1-213ENST00000441310 CRB2Q5IJ48 1285 aa15.81■□□□□ 0.12
PMS1-213ENST00000441310 SAMD12Q8N8I0 201 aa15.81■□□□□ 0.12
PMS1-213ENST00000441310 SLC22A8Q8TCC7 542 aa15.81■□□□□ 0.12
PMS1-213ENST00000441310 CSGALNACT1Q8TDX6 532 aa15.81■□□□□ 0.12
PMS1-213ENST00000441310 YIPF5Q969M3 257 aa15.81■□□□□ 0.12
PMS1-213ENST00000441310 OR4K3Q96R72 315 aa15.81■□□□□ 0.12
PMS1-213ENST00000441310 ESRP2Q9H6T0 727 aaKnown RBP15.81■□□□□ 0.12
PMS1-213ENST00000441310 ARL15Q9NXU5 204 aa15.81■□□□□ 0.12
PMS1-213ENST00000441310 HCFC2Q9Y5Z7 792 aa15.81■□□□□ 0.12
PMS1-213ENST00000441310 NEDD8-MDP1E9PL57 170 aa15.81■□□□□ 0.12
PMS1-213ENST00000441310 FOSL1P15407 271 aa15.81■□□□□ 0.12
PMS1-213ENST00000441310 CD9P21926 228 aa15.81■□□□□ 0.12
PMS1-213ENST00000441310 MMP12P39900 470 aa15.81■□□□□ 0.12
PMS1-213ENST00000441310 HAAOP46952 286 aa15.81■□□□□ 0.12
PMS1-213ENST00000441310 LRRC74AQ0VAA2 488 aa15.81■□□□□ 0.12
PMS1-213ENST00000441310 ZNF770Q6IQ21 691 aaPredicted RBP15.81■□□□□ 0.12
PMS1-213ENST00000441310 MTFR2Q6P444 385 aa15.81■□□□□ 0.12
PMS1-213ENST00000441310 ADGRG2Q8IZP9 1017 aa15.81■□□□□ 0.12
PMS1-213ENST00000441310 SORCS1Q8WY21 1168 aa15.81■□□□□ 0.12
PMS1-213ENST00000441310 ZDHHC6Q9H6R6 413 aa15.81■□□□□ 0.12
PMS1-213ENST00000441310 GPATCH2Q9NW75 528 aa15.81■□□□□ 0.12
PMS1-213ENST00000441310 CD84Q9UIB8 345 aa15.81■□□□□ 0.12
PMS1-213ENST00000441310 CRLS1Q9UJA2 301 aa15.81■□□□□ 0.12
PMS1-213ENST00000441310 MAP4K5Q9Y4K4 846 aa15.81■□□□□ 0.12
PMS1-213ENST00000441310 DSPPQ9NZW4 1301 aa15.81■□□□□ 0.12
PMS1-213ENST00000441310 C1orf226A1L170 272 aa15.81■□□□□ 0.12
PMS1-213ENST00000441310 NPIPB15A6NHN6 443 aaPredicted RBP15.81■□□□□ 0.12
PMS1-213ENST00000441310 GABRPO00591 440 aa15.81■□□□□ 0.12
PMS1-213ENST00000441310 CASC3O15234 703 aaKnown RBP15.81■□□□□ 0.12
PMS1-213ENST00000441310 ADAM11O75078 769 aa15.81■□□□□ 0.12
PMS1-213ENST00000441310 TIMP1P01033 207 aa15.81■□□□□ 0.12
PMS1-213ENST00000441310 AP1S2P56377 157 aa15.81■□□□□ 0.12
PMS1-213ENST00000441310 S100A12P80511 92 aa15.81■□□□□ 0.12
PMS1-213ENST00000441310 CACNG1Q06432 222 aa15.81■□□□□ 0.12
PMS1-213ENST00000441310 SYT14P1Q58G82 188 aa15.81■□□□□ 0.12
PMS1-213ENST00000441310 MPP7Q5T2T1 576 aa15.81■□□□□ 0.12
PMS1-213ENST00000441310 CPTPQ5TA50 214 aa15.81■□□□□ 0.12
PMS1-213ENST00000441310 RNF165Q6ZSG1 346 aa15.81■□□□□ 0.12
PMS1-213ENST00000441310 OR5AK3PQ8NH89 298 aa15.81■□□□□ 0.12
PMS1-213ENST00000441310 ABHD1Q96SE0 405 aa15.81■□□□□ 0.12
PMS1-213ENST00000441310 MTERF1Q99551 399 aaKnown RBP15.81■□□□□ 0.12
PMS1-213ENST00000441310 MTG2Q9H4K7 406 aa15.81■□□□□ 0.12
PMS1-213ENST00000441310 SEMA3GQ9NS98 782 aa15.81■□□□□ 0.12
PMS1-213ENST00000441310 ZFR2Q9UPR6 939 aaKnown RBP15.81■□□□□ 0.12
PMS1-213ENST00000441310 ANXA2P2A6NMY6 339 aa15.8■□□□□ 0.12
PMS1-213ENST00000441310 SGTAO43765 313 aa15.8■□□□□ 0.12
PMS1-213ENST00000441310 LILRB3O75022 631 aa15.8■□□□□ 0.12
PMS1-213ENST00000441310 ZNF821O75541 412 aaPredicted RBP15.8■□□□□ 0.12
PMS1-213ENST00000441310 OLFM2O95897 454 aa15.8■□□□□ 0.12
PMS1-213ENST00000441310 FGF9P31371 208 aaPredicted RBP15.8■□□□□ 0.12
PMS1-213ENST00000441310 ILKQ13418 452 aa15.8■□□□□ 0.12
PMS1-213ENST00000441310 LTB4RQ15722 352 aa15.8■□□□□ 0.12
PMS1-213ENST00000441310 GCNT6Q5T4J0 391 aa15.8■□□□□ 0.12
PMS1-213ENST00000441310 C12orf73Q69YU5 71 aa15.8■□□□□ 0.12
PMS1-213ENST00000441310 ASTLQ6HA08 431 aaPredicted RBP15.8■□□□□ 0.12
PMS1-213ENST00000441310 NPAS3Q8IXF0 933 aa15.8■□□□□ 0.12
PMS1-213ENST00000441310 OR4K1Q8NGD4 311 aa15.8■□□□□ 0.12
PMS1-213ENST00000441310 OR8J2Q8NGG1 315 aa15.8■□□□□ 0.12
PMS1-213ENST00000441310 PIGKQ92643 395 aa15.8■□□□□ 0.12
PMS1-213ENST00000441310 ZBP1Q9H171 429 aa15.8■□□□□ 0.12
PMS1-213ENST00000441310 OSGEPL1Q9H4B0 414 aa15.8■□□□□ 0.12
PMS1-213ENST00000441310 SLC39A1Q9NY26 324 aa15.8■□□□□ 0.12
PMS1-213ENST00000441310 RNF215Q9Y6U7 377 aa15.8■□□□□ 0.12
PMS1-213ENST00000441310 TRDV1A0A1B0GX56 115 aa15.8■□□□□ 0.12
PMS1-213ENST00000441310 GAPDHSO14556 408 aaPredicted RBP15.8■□□□□ 0.12
PMS1-213ENST00000441310 MT-ND4P03905 459 aa15.8■□□□□ 0.12
PMS1-213ENST00000441310 IFNW1P05000 195 aa15.8■□□□□ 0.12
PMS1-213ENST00000441310 FGF2P09038 288 aa15.8■□□□□ 0.12
PMS1-213ENST00000441310 CTSAP10619 480 aa15.8■□□□□ 0.12
PMS1-213ENST00000441310 DGKAP23743 735 aa15.8■□□□□ 0.12
PMS1-213ENST00000441310 HMGA2P52926 109 aa15.8■□□□□ 0.12
PMS1-213ENST00000441310 AP1S1P61966 158 aa15.8■□□□□ 0.12
PMS1-213ENST00000441310 GPR33Q49SQ1 333 aa15.8■□□□□ 0.12
PMS1-213ENST00000441310 SIAH3Q8IW03 269 aa15.8■□□□□ 0.12
PMS1-213ENST00000441310 TOMM5Q8N4H5 51 aa15.8■□□□□ 0.12
PMS1-213ENST00000441310 ZNF454Q8N9F8 522 aa15.8■□□□□ 0.12
PMS1-213ENST00000441310 LRRC46Q96FV0 321 aa15.8■□□□□ 0.12
PMS1-213ENST00000441310 AHCYL2Q96HN2 611 aaKnown RBP15.8■□□□□ 0.12
PMS1-213ENST00000441310 GOLGA4Q13439 2230 aaKnown RBP15.79■□□□□ 0.12
PMS1-213ENST00000441310 H7C2Y5 167 aa15.79■□□□□ 0.12
PMS1-213ENST00000441310 FFAR1O14842 300 aa15.79■□□□□ 0.12
PMS1-213ENST00000441310 OR5F1O95221 314 aa15.79■□□□□ 0.12
PMS1-213ENST00000441310 OR12D1P0DN82 309 aa15.79■□□□□ 0.12
PMS1-213ENST00000441310 ITPKAP23677 461 aa15.79■□□□□ 0.12
PMS1-213ENST00000441310 GDI2P50395 445 aaKnown RBP15.79■□□□□ 0.12
PMS1-213ENST00000441310 FGL2Q14314 439 aa15.79■□□□□ 0.12
PMS1-213ENST00000441310 TEAD2Q15562 447 aa15.79■□□□□ 0.12
PMS1-213ENST00000441310 ZNF784Q8NCA9 323 aaPredicted RBP15.79■□□□□ 0.12
PMS1-213ENST00000441310 SKA2Q8WVK7 121 aaPredicted RBP15.79■□□□□ 0.12
PMS1-213ENST00000441310 ERVK-19Q9WJR5 959 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms