RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 SPTY2D1-AS1A0A0U1RR47 76 aa13.29□□□□□ -0.28
LIMD1-202ENST00000440097 ZNF860A6NHJ4 632 aa13.29□□□□□ -0.28
LIMD1-202ENST00000440097 CSNK2A2P19784 350 aaPredicted RBP13.29□□□□□ -0.28
LIMD1-202ENST00000440097 MPIP34949 423 aa13.29□□□□□ -0.28
LIMD1-202ENST00000440097 FRKP42685 505 aaPredicted RBP13.29□□□□□ -0.28
LIMD1-202ENST00000440097 PCBP3P57721 371 aaKnown RBP13.29□□□□□ -0.28
LIMD1-202ENST00000440097 SYPL1Q16563 259 aa13.29□□□□□ -0.28
LIMD1-202ENST00000440097 YIF1BQ5BJH7 314 aa13.29□□□□□ -0.28
LIMD1-202ENST00000440097 FBXO42Q6P3S6 717 aa13.29□□□□□ -0.28
LIMD1-202ENST00000440097 SYT13Q7L8C5 426 aa13.29□□□□□ -0.28
LIMD1-202ENST00000440097 NOXA1Q86UR1 476 aa13.29□□□□□ -0.28
LIMD1-202ENST00000440097 GRPEL2Q8TAA5 225 aa13.29□□□□□ -0.28
LIMD1-202ENST00000440097 VANGL1Q8TAA9 524 aaPredicted RBP13.29□□□□□ -0.28
LIMD1-202ENST00000440097 GAL3ST3Q96A11 431 aa13.29□□□□□ -0.28
LIMD1-202ENST00000440097 KLHDC7BQ96G42 594 aa13.29□□□□□ -0.28
LIMD1-202ENST00000440097 MSANTD3Q96H12 275 aa13.29□□□□□ -0.28
LIMD1-202ENST00000440097 SLC6A18Q96N87 628 aa13.29□□□□□ -0.28
LIMD1-202ENST00000440097 FEVQ99581 238 aa13.29□□□□□ -0.28
LIMD1-202ENST00000440097 BEX2Q9BXY8 128 aa13.29□□□□□ -0.28
LIMD1-202ENST00000440097 GABARAPL3Q9BY60 117 aa13.29□□□□□ -0.28
LIMD1-202ENST00000440097 MMP28Q9H239 520 aa13.29□□□□□ -0.28
LIMD1-202ENST00000440097 ANKRA2Q9H9E1 313 aa13.29□□□□□ -0.28
LIMD1-202ENST00000440097 WSB2Q9NYS7 404 aaPredicted RBP13.29□□□□□ -0.28
LIMD1-202ENST00000440097 P2RX2Q9UBL9 471 aa13.29□□□□□ -0.28
LIMD1-202ENST00000440097 MUTYHQ9UIF7 546 aa13.29□□□□□ -0.28
LIMD1-202ENST00000440097 TRAPPC4Q9Y296 219 aa13.29□□□□□ -0.28
LIMD1-202ENST00000440097 PCDHGB2Q9Y5G2 931 aa13.29□□□□□ -0.28
LIMD1-202ENST00000440097 COL4A2P08572 1712 aa13.29□□□□□ -0.28
LIMD1-202ENST00000440097 C2orf74A8MZ97 194 aa13.29□□□□□ -0.28
LIMD1-202ENST00000440097 FAM25AB3EWG3 89 aa13.29□□□□□ -0.28
LIMD1-202ENST00000440097 FAM25CB3EWG5 89 aa13.29□□□□□ -0.28
LIMD1-202ENST00000440097 FAM25GB3EWG6 89 aa13.29□□□□□ -0.28
LIMD1-202ENST00000440097 UGT2B17O75795 530 aa13.29□□□□□ -0.28
LIMD1-202ENST00000440097 NR2F6P10588 404 aa13.29□□□□□ -0.28
LIMD1-202ENST00000440097 AZGP1P25311 298 aaKnown RBP13.29□□□□□ -0.28
LIMD1-202ENST00000440097 GGT2P36268 569 aa13.29□□□□□ -0.28
LIMD1-202ENST00000440097 BUD31P41223 144 aaPredicted RBP13.29□□□□□ -0.28
LIMD1-202ENST00000440097 OLR1P78380 273 aa13.29□□□□□ -0.28
LIMD1-202ENST00000440097 GPLD1P80108 840 aa13.29□□□□□ -0.28
LIMD1-202ENST00000440097 SLC48A1Q6P1K1 146 aa13.29□□□□□ -0.28
LIMD1-202ENST00000440097 BHLHB9Q6PI77 547 aa13.29□□□□□ -0.28
LIMD1-202ENST00000440097 OLIG3Q7RTU3 272 aa13.29□□□□□ -0.28
LIMD1-202ENST00000440097 OR10G2Q8NGC3 310 aa13.29□□□□□ -0.28
LIMD1-202ENST00000440097 SETD6Q8TBK2 473 aa13.29□□□□□ -0.28
LIMD1-202ENST00000440097 ZNF607Q96SK3 696 aa13.29□□□□□ -0.28
LIMD1-202ENST00000440097 SARGQ9BW04 601 aa13.29□□□□□ -0.28
LIMD1-202ENST00000440097 RSPO3Q9BXY4 272 aaPredicted RBP13.29□□□□□ -0.28
LIMD1-202ENST00000440097 ROGDIQ9GZN7 287 aa13.29□□□□□ -0.28
LIMD1-202ENST00000440097 A4GALTQ9NPC4 353 aa13.29□□□□□ -0.28
LIMD1-202ENST00000440097 POT1Q9NUX5 634 aa13.29□□□□□ -0.28
LIMD1-202ENST00000440097 CFL2Q9Y281 166 aa13.29□□□□□ -0.28
LIMD1-202ENST00000440097 STK25O00506 426 aa13.28□□□□□ -0.28
LIMD1-202ENST00000440097 RGS5O15539 181 aa13.28□□□□□ -0.28
LIMD1-202ENST00000440097 PROM1O43490 865 aa13.28□□□□□ -0.28
LIMD1-202ENST00000440097 PDE9AO76083 593 aa13.28□□□□□ -0.28
LIMD1-202ENST00000440097 GADD45GO95257 159 aa13.28□□□□□ -0.28
LIMD1-202ENST00000440097 HMGN2P05204 90 aaKnown RBP13.28□□□□□ -0.28
LIMD1-202ENST00000440097 YES1P07947 543 aa13.28□□□□□ -0.28
LIMD1-202ENST00000440097 ENDOUP21128 410 aaKnown RBP13.28□□□□□ -0.28
LIMD1-202ENST00000440097 CPN2P22792 545 aa13.28□□□□□ -0.28
LIMD1-202ENST00000440097 IDH2P48735 452 aaKnown RBP13.28□□□□□ -0.28
LIMD1-202ENST00000440097 CCR5P51681 352 aa13.28□□□□□ -0.28
LIMD1-202ENST00000440097 HHEXQ03014 270 aa13.28□□□□□ -0.28
LIMD1-202ENST00000440097 ST3GAL4Q11206 333 aa13.28□□□□□ -0.28
LIMD1-202ENST00000440097 EIF2B5Q13144 721 aaKnown RBP13.28□□□□□ -0.28
LIMD1-202ENST00000440097 ELOAQ14241 798 aaKnown RBP13.28□□□□□ -0.28
LIMD1-202ENST00000440097 SUZ12Q15022 739 aaKnown RBP13.28□□□□□ -0.28
LIMD1-202ENST00000440097 TAB1Q15750 504 aa13.28□□□□□ -0.28
LIMD1-202ENST00000440097 EXOC3L2Q2M3D2 409 aa13.28□□□□□ -0.28
LIMD1-202ENST00000440097 LGI4Q8N135 537 aa13.28□□□□□ -0.28
LIMD1-202ENST00000440097 OR9A2Q8NGT5 310 aa13.28□□□□□ -0.28
LIMD1-202ENST00000440097 GPBAR1Q8TDU6 330 aa13.28□□□□□ -0.28
LIMD1-202ENST00000440097 TREX2Q9BQ50 279 aaPredicted RBP13.28□□□□□ -0.28
LIMD1-202ENST00000440097 ZNF556Q9HAH1 456 aa13.28□□□□□ -0.28
LIMD1-202ENST00000440097 SMURF1Q9HCE7 757 aa13.28□□□□□ -0.28
LIMD1-202ENST00000440097 NUFIP1Q9UHK0 495 aaKnown RBP13.28□□□□□ -0.28
LIMD1-202ENST00000440097 LOC105369274A0A096LPK9 316 aa13.28□□□□□ -0.28
LIMD1-202ENST00000440097 A0A0G2JMP0 313 aa13.28□□□□□ -0.28
LIMD1-202ENST00000440097 LOC102723532A0A0G2JNH3 316 aa13.28□□□□□ -0.28
LIMD1-202ENST00000440097 URADA6NGE7 173 aa13.28□□□□□ -0.28
LIMD1-202ENST00000440097 P2RX6O15547 441 aa13.28□□□□□ -0.28
LIMD1-202ENST00000440097 NME6O75414 186 aaPredicted RBP13.28□□□□□ -0.28
LIMD1-202ENST00000440097 MC3RP41968 323 aa13.28□□□□□ -0.28
LIMD1-202ENST00000440097 FZD2Q14332 565 aa13.28□□□□□ -0.28
LIMD1-202ENST00000440097 BAK1Q16611 211 aa13.28□□□□□ -0.28
LIMD1-202ENST00000440097 TSTQ16762 297 aaKnown RBP13.28□□□□□ -0.28
LIMD1-202ENST00000440097 GPAT3Q53EU6 434 aa13.28□□□□□ -0.28
LIMD1-202ENST00000440097 WDR45BQ5MNZ6 344 aa13.28□□□□□ -0.28
LIMD1-202ENST00000440097 MRM1Q6IN84 353 aaKnown RBP13.28□□□□□ -0.28
LIMD1-202ENST00000440097 FRMPD2BQ6IN97 320 aa13.28□□□□□ -0.28
LIMD1-202ENST00000440097 ARMC6Q6NXE6 501 aa13.28□□□□□ -0.28
LIMD1-202ENST00000440097 DEF8Q6ZN54 512 aa13.28□□□□□ -0.28
LIMD1-202ENST00000440097 C11orf74Q86VG3 221 aa13.28□□□□□ -0.28
LIMD1-202ENST00000440097 OR4N4Q8N0Y3 316 aa13.28□□□□□ -0.28
LIMD1-202ENST00000440097 SLC5A8Q8N695 610 aa13.28□□□□□ -0.28
LIMD1-202ENST00000440097 KAT2AQ92830 837 aa13.28□□□□□ -0.28
LIMD1-202ENST00000440097 CITED4Q96RK1 184 aa13.28□□□□□ -0.28
LIMD1-202ENST00000440097 PIP5K1AQ99755 562 aa13.28□□□□□ -0.28
LIMD1-202ENST00000440097 SERHL2Q9H4I8 314 aa13.28□□□□□ -0.28
LIMD1-202ENST00000440097 KLK4Q9Y5K2 254 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms