RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 C9orf62Q8N4C0 152 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 OR9A1PQ8NGU1 263 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 ZFPM2Q8WW38 1151 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 GLYATL1Q969I3 302 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 KIAA1143Q96AT1 154 aaPredicted RBP8.53□□□□□ -1.04
COPB1-202ENST00000439561 TIFAQ96CG3 184 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 ELMOD3Q96FG2 381 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 PAWRQ96IZ0 340 aaKnown RBP8.53□□□□□ -1.04
COPB1-202ENST00000439561 GINS4Q9BRT9 223 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 MRPL9Q9BYD2 267 aaKnown RBP8.53□□□□□ -1.04
COPB1-202ENST00000439561 CHST8Q9H2A9 424 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 NEUROD4Q9HD90 331 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 TMEM138Q9NPI0 162 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 SLC9A3R1O14745 358 aaPredicted RBP8.53□□□□□ -1.04
COPB1-202ENST00000439561 RAF1P04049 648 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 PYCR1P32322 319 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 GPR162Q16538 588 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 OCLNQ16625 522 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 C12orf73Q69YU5 71 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 FAM71E1Q6IPT2 247 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 RNF165Q6ZSG1 346 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 PRSS45Q7RTY3 260 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 GPR155Q7Z3F1 870 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 FGD2Q7Z6J4 655 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 SERPINA12Q8IW75 414 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 NRMQ8IXM6 262 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 FAM26EQ8N5C1 309 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 FBXO15Q8NCQ5 510 aaPredicted RBP8.53□□□□□ -1.04
COPB1-202ENST00000439561 ADAMTS19Q8TE59 1207 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 ARSGQ96EG1 525 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 AIF1LQ9BQI0 150 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 CWH43Q9H720 699 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 MYNNQ9NPC7 610 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 TDP1Q9NUW8 608 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 FXYD6-FXYD2A0A087WZ82 144 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 QSOX1O00391 747 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 CDK2AP1O14519 115 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 GRM6O15303 877 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 PI15O43692 258 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 RGS9O75916 674 aaPredicted RBP8.52□□□□□ -1.05
COPB1-202ENST00000439561 UBXN7O94888 489 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 TCRBP04435 133 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 EIF4EP06730 217 aaKnown RBP8.52□□□□□ -1.05
COPB1-202ENST00000439561 PEPDP12955 493 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 NPPBP16860 134 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 HMGA1P17096 107 aaKnown RBP8.52□□□□□ -1.05
COPB1-202ENST00000439561 C4BPBP20851 252 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 KCNJ5P48544 419 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 HMGA2P52926 109 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 EPHA5P54756 1037 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 STXBP1P61764 594 aaKnown RBP8.52□□□□□ -1.05
COPB1-202ENST00000439561 OC90Q02509 493 aaPredicted RBP8.52□□□□□ -1.05
COPB1-202ENST00000439561 TAP2Q03519 686 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 TNK1Q13470 666 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 ARSKQ6UWY0 536 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 CFAP77Q6ZQR2 320 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 ZNF527Q8NB42 609 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 CYB561A3Q8NBI2 242 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 ZBTB44Q8NCP5 570 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 ZNF461Q8TAF7 563 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 LINC01599Q8WXQ3 324 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 SCLYQ96I15 445 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 SAMD8Q96LT4 415 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 NRTNQ99748 197 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 MARVELD1Q9BSK0 173 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 IFT27Q9BW83 186 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 FXYD6Q9H0Q3 95 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 ISG20L2Q9H9L3 353 aaKnown RBP8.52□□□□□ -1.05
COPB1-202ENST00000439561 PFDN2Q9UHV9 154 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 NTNG1Q9Y2I2 539 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 SLC45A1Q9Y2W3 748 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 DOCK4Q8N1I0 1966 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 GREB1Q4ZG55 1949 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 TRDV1A0A1B0GX56 115 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 TMEM189-UBE2V1I3L0A0 370 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 POP7O75817 140 aaKnown RBP8.52□□□□□ -1.05
COPB1-202ENST00000439561 SOD1P00441 154 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 LIMS3P0CW19 117 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 LIMS4P0CW20 117 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 SNRPBP14678 240 aaKnown RBP8.52□□□□□ -1.05
COPB1-202ENST00000439561 TRIM23P36406 574 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 NUDT1P36639 197 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 NUP62P37198 522 aaPredicted RBP8.52□□□□□ -1.05
COPB1-202ENST00000439561 PNLIPRP1P54315 467 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 ST8SIA6P61647 398 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 DEFA5Q01523 94 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 TAGLNQ01995 201 aaKnown RBP8.52□□□□□ -1.05
COPB1-202ENST00000439561 TGM3Q08188 693 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 LGALS3BPQ08380 585 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 LAMTOR1Q6IAA8 161 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 PRICKLE2Q7Z3G6 844 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 SIAH3Q8IW03 269 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 ACBD7Q8N6N7 88 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 LSM14AQ8ND56 463 aaKnown RBP8.52□□□□□ -1.05
COPB1-202ENST00000439561 C2orf15Q8WU43 125 aaKnown RBP8.52□□□□□ -1.05
COPB1-202ENST00000439561 GCDHQ92947 438 aaPredicted RBP8.52□□□□□ -1.05
COPB1-202ENST00000439561 PDXPQ96GD0 296 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 ALG8Q9BVK2 526 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 TRIM36Q9NQ86 728 aa8.52□□□□□ -1.05
COPB1-202ENST00000439561 MGAT4CQ9UBM8 478 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms