RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 RENP00797 406 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 PRPH2P23942 346 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 ITGB7P26010 798 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 PTGER1P34995 402 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 MC3RP41968 323 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 SNRPGP62308 76 aaKnown RBP6.31□□□□□ -1.4
CSDE1-205ENST00000438362 NTHL1P78549 312 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 SLC14A1Q13336 389 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 KIAA0040Q15053 153 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 MINDY4Q4G0A6 757 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 C3orf38Q5JPI3 329 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 SLC25A25Q6KCM7 469 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 FAM83HQ6ZRV2 1179 aaPredicted RBP6.31□□□□□ -1.4
CSDE1-205ENST00000438362 NLRP8Q86W28 1048 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 YIPF7Q8N8F6 280 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 CEP76Q8TAP6 659 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 HCAR2Q8TDS4 363 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 MCCC1Q96RQ3 725 aaPredicted RBP6.31□□□□□ -1.4
CSDE1-205ENST00000438362 CTRCQ99895 268 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 CDADC1Q9BWV3 514 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 Q9N2J8 555 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 TEX13CA0A0J9YWL9 993 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 C17orf113A0A1B0GUU1 675 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 TMEM202A6NGA9 273 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 TMEM221A6NGB7 291 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 TOXO94900 526 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 SOX30O94993 753 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 CSF2RAP15509 400 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 ALAS2P22557 587 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 GABRA3P34903 492 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 PTGS2P35354 604 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 NAA10P41227 235 aaPredicted RBP6.31□□□□□ -1.4
CSDE1-205ENST00000438362 KCNJ5P48544 419 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 CAV3P56539 151 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 TRA2BP62995 288 aaKnown RBP6.31□□□□□ -1.4
CSDE1-205ENST00000438362 SEC23BQ15437 767 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 FLYWCH1Q4VC44 716 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 C4orf46Q504U0 113 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 CST9Q5W186 159 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 RPTNQ6XPR3 784 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 ZNF782Q6ZMW2 699 aaPredicted RBP6.31□□□□□ -1.4
CSDE1-205ENST00000438362 PEG10Q86TG7 708 aaKnown RBP6.31□□□□□ -1.4
CSDE1-205ENST00000438362 ACOT4Q8N9L9 421 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 TOR1AIP2Q8NFQ8 470 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 LINC01599Q8WXQ3 324 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 SNAPC3Q92966 411 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 TBC1D20Q96BZ9 403 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 SPACA7Q96KW9 195 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 HSPA12BQ96MM6 686 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 HS6ST2Q96MM7 605 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 S100A13Q99584 98 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 DDX31Q9H8H2 851 aaKnown RBP6.31□□□□□ -1.4
CSDE1-205ENST00000438362 NUDT15Q9NV35 164 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 CUEDC1Q9NWM3 386 aaPredicted RBP6.31□□□□□ -1.4
CSDE1-205ENST00000438362 CLEC4EQ9ULY5 219 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 DIMT1Q9UNQ2 313 aaKnown RBP6.31□□□□□ -1.4
CSDE1-205ENST00000438362 BOLA1Q9Y3E2 137 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 PCDHGA4Q9Y5G9 962 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 FXYD6-FXYD2A0A087WZ82 144 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 LOC102723532A0A0G2JNH3 316 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 TRBV2A0A0J9YWF9 115 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 A0A1W2PP55 124 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 LRRTM2O43300 516 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 GMFGO60234 142 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 GPX5O75715 221 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 DBIP07108 87 aaKnown RBP6.3□□□□□ -1.4
CSDE1-205ENST00000438362 HNRNPA1P09651 372 aaKnown RBP eCLIP6.3□□□□□ -1.4
CSDE1-205ENST00000438362 PIPP12273 146 aaPredicted RBP6.3□□□□□ -1.4
CSDE1-205ENST00000438362 TGM1P22735 817 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 MAPK3P27361 379 aaPredicted RBP6.3□□□□□ -1.4
CSDE1-205ENST00000438362 APEX1P27695 318 aaKnown RBP6.3□□□□□ -1.4
CSDE1-205ENST00000438362 GABRA5P31644 462 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 PITPNBP48739 271 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 DNASE1L1P49184 302 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 CSRP3P50461 194 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 PSMA6P60900 246 aaKnown RBP6.3□□□□□ -1.4
CSDE1-205ENST00000438362 YBX1P67809 324 aaKnown RBP6.3□□□□□ -1.4
CSDE1-205ENST00000438362 SIM1P81133 766 aaPredicted RBP6.3□□□□□ -1.4
CSDE1-205ENST00000438362 HOXC5Q00444 222 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 TSPAN31Q12999 210 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 ZNF267Q14586 743 aaPredicted RBP6.3□□□□□ -1.4
CSDE1-205ENST00000438362 IHHQ14623 411 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 ALG11Q2TAA5 492 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 HNRNPA1L2Q32P51 320 aaKnown RBP6.3□□□□□ -1.4
CSDE1-205ENST00000438362 METAP1DQ6UB28 335 aaPredicted RBP6.3□□□□□ -1.4
CSDE1-205ENST00000438362 BAIAP2L2Q6UXY1 529 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 BCDIN3DQ7Z5W3 292 aaKnown RBP6.3□□□□□ -1.4
CSDE1-205ENST00000438362 OR4N5Q8IXE1 308 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 CHST4Q8NCG5 386 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 SIMC1Q8NDZ2 872 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 OR10H5Q8NGA6 315 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 OR4F15Q8NGB8 312 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 WDR20Q8TBZ3 569 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 TRMT10AQ8TBZ6 339 aaKnown RBP6.3□□□□□ -1.4
CSDE1-205ENST00000438362 PDXPQ96GD0 296 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 PITHD1Q9GZP4 211 aaPredicted RBP6.3□□□□□ -1.4
CSDE1-205ENST00000438362 FXYD6Q9H0Q3 95 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 EGLN3Q9H6Z9 239 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 ZDHHC4Q9NPG8 344 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms