RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 PHF11Q9UIL8 331 aa17.41■□□□□ 0.38
CLK1-205ENST00000434813 GSAPA4D1B5 854 aa17.4■□□□□ 0.38
CLK1-205ENST00000434813 DUXAA6NLW8 204 aa17.4■□□□□ 0.38
CLK1-205ENST00000434813 CPSF4LA6NMK7 179 aaKnown RBP17.4■□□□□ 0.38
CLK1-205ENST00000434813 SNTNA6NMZ2 147 aa17.4■□□□□ 0.38
CLK1-205ENST00000434813 ACP2P11117 423 aa17.4■□□□□ 0.38
CLK1-205ENST00000434813 HOXB2P14652 356 aa17.4■□□□□ 0.38
CLK1-205ENST00000434813 ALOX12P18054 663 aa17.4■□□□□ 0.38
CLK1-205ENST00000434813 AK4P27144 223 aaPredicted RBP17.4■□□□□ 0.38
CLK1-205ENST00000434813 IFNA8P32881 189 aa17.4■□□□□ 0.38
CLK1-205ENST00000434813 RPS19P39019 145 aaKnown RBP17.4■□□□□ 0.38
CLK1-205ENST00000434813 CLDN2P57739 230 aa17.4■□□□□ 0.38
CLK1-205ENST00000434813 RAB40BQ12829 278 aa17.4■□□□□ 0.38
CLK1-205ENST00000434813 FAM214AQ32MH5 1076 aa17.4■□□□□ 0.38
CLK1-205ENST00000434813 FAM111BQ6SJ93 734 aa17.4■□□□□ 0.38
CLK1-205ENST00000434813 ZNF730Q6ZMV8 503 aa17.4■□□□□ 0.38
CLK1-205ENST00000434813 SAMD14Q8IZD0 417 aaPredicted RBP17.4■□□□□ 0.38
CLK1-205ENST00000434813 OR8D4Q8NGM9 314 aa17.4■□□□□ 0.38
CLK1-205ENST00000434813 ADAMTS15Q8TE58 950 aa17.4■□□□□ 0.38
CLK1-205ENST00000434813 ZG16BQ96DA0 208 aa17.4■□□□□ 0.38
CLK1-205ENST00000434813 KCNS3Q9BQ31 491 aa17.4■□□□□ 0.38
CLK1-205ENST00000434813 CCDC32Q9BV29 185 aa17.4■□□□□ 0.38
CLK1-205ENST00000434813 PRRG3Q9BZD7 231 aa17.4■□□□□ 0.38
CLK1-205ENST00000434813 TWSG1Q9GZX9 223 aa17.4■□□□□ 0.38
CLK1-205ENST00000434813 SRMSQ9H3Y6 488 aa17.4■□□□□ 0.38
CLK1-205ENST00000434813 FGF20Q9NP95 211 aaPredicted RBP17.4■□□□□ 0.38
CLK1-205ENST00000434813 KLHL28Q9NXS3 571 aa17.4■□□□□ 0.38
CLK1-205ENST00000434813 SCML1Q9UN30 329 aa17.4■□□□□ 0.38
CLK1-205ENST00000434813 AGR2O95994 175 aa17.4■□□□□ 0.38
CLK1-205ENST00000434813 IGFBP4P22692 258 aa17.4■□□□□ 0.38
CLK1-205ENST00000434813 ETV5P41161 510 aa17.4■□□□□ 0.38
CLK1-205ENST00000434813 OMPP47874 163 aa17.4■□□□□ 0.38
CLK1-205ENST00000434813 ETV1P50549 477 aa17.4■□□□□ 0.38
CLK1-205ENST00000434813 PDX1P52945 283 aa17.4■□□□□ 0.38
CLK1-205ENST00000434813 KRR1Q13601 381 aaKnown RBP17.4■□□□□ 0.38
CLK1-205ENST00000434813 MINDY4Q4G0A6 757 aa17.4■□□□□ 0.38
CLK1-205ENST00000434813 CDC73Q6P1J9 531 aa17.4■□□□□ 0.38
CLK1-205ENST00000434813 ENPP7Q6UWV6 458 aa17.4■□□□□ 0.38
CLK1-205ENST00000434813 FLCNQ8NFG4 579 aa17.4■□□□□ 0.38
CLK1-205ENST00000434813 OR7G2Q8NG99 324 aa17.4■□□□□ 0.38
CLK1-205ENST00000434813 OR52P1PQ8NH57 321 aa17.4■□□□□ 0.38
CLK1-205ENST00000434813 PIGXQ8TBF5 258 aa17.4■□□□□ 0.38
CLK1-205ENST00000434813 HTRA1Q92743 480 aa17.4■□□□□ 0.38
CLK1-205ENST00000434813 SLC38A2Q96QD8 506 aa17.4■□□□□ 0.38
CLK1-205ENST00000434813 SLC30A2Q9BRI3 323 aa17.4■□□□□ 0.38
CLK1-205ENST00000434813 PRR14Q9BWN1 585 aa17.4■□□□□ 0.38
CLK1-205ENST00000434813 BARHL1Q9BZE3 327 aa17.4■□□□□ 0.38
CLK1-205ENST00000434813 SAP130Q9H0E3 1048 aa17.4■□□□□ 0.38
CLK1-205ENST00000434813 ANKMY1Q9P2S6 941 aa17.4■□□□□ 0.38
CLK1-205ENST00000434813 SSR3Q9UNL2 185 aa17.4■□□□□ 0.38
CLK1-205ENST00000434813 TMEM265A0A087WTH1 108 aa17.39■□□□□ 0.37
CLK1-205ENST00000434813 TMEM129A0AVI4 362 aa17.39■□□□□ 0.37
CLK1-205ENST00000434813 CTDSP2O14595 271 aa17.39■□□□□ 0.37
CLK1-205ENST00000434813 CCNYL3P0C7X3 344 aa17.39■□□□□ 0.37
CLK1-205ENST00000434813 CPEP16870 476 aa17.39■□□□□ 0.37
CLK1-205ENST00000434813 MYL12AP19105 171 aa17.39■□□□□ 0.37
CLK1-205ENST00000434813 CTHP32929 405 aa17.39■□□□□ 0.37
CLK1-205ENST00000434813 TRHRP34981 398 aaPredicted RBP17.39■□□□□ 0.37
CLK1-205ENST00000434813 KIR2DS3Q14952 304 aa17.39■□□□□ 0.37
CLK1-205ENST00000434813 SUZ12Q15022 739 aaKnown RBP17.39■□□□□ 0.37
CLK1-205ENST00000434813 LIPKQ5VXJ0 399 aa17.39■□□□□ 0.37
CLK1-205ENST00000434813 FRRS1Q6ZNA5 592 aa17.39■□□□□ 0.37
CLK1-205ENST00000434813 USP30Q70CQ3 517 aa17.39■□□□□ 0.37
CLK1-205ENST00000434813 DGLUCYQ7Z3D6 616 aa17.39■□□□□ 0.37
CLK1-205ENST00000434813 PRICKLE2Q7Z3G6 844 aa17.39■□□□□ 0.37
CLK1-205ENST00000434813 TM4SF19Q96DZ7 209 aa17.39■□□□□ 0.37
CLK1-205ENST00000434813 SLC35A4Q96G79 324 aa17.39■□□□□ 0.37
CLK1-205ENST00000434813 CEP19Q96LK0 163 aa17.39■□□□□ 0.37
CLK1-205ENST00000434813 WDR92Q96MX6 357 aa17.39■□□□□ 0.37
CLK1-205ENST00000434813 SERINC2Q96SA4 455 aa17.39■□□□□ 0.37
CLK1-205ENST00000434813 C6orf106Q9H6K1 298 aaPredicted RBP17.39■□□□□ 0.37
CLK1-205ENST00000434813 CNIH4Q9P003 139 aa17.39■□□□□ 0.37
CLK1-205ENST00000434813 KCMF1Q9P0J7 381 aa17.39■□□□□ 0.37
CLK1-205ENST00000434813 TRAPPC4Q9Y296 219 aa17.39■□□□□ 0.37
CLK1-205ENST00000434813 KDM4EB2RXH2 506 aaPredicted RBP17.38■□□□□ 0.37
CLK1-205ENST00000434813 NARSO43776 548 aaKnown RBP17.38■□□□□ 0.37
CLK1-205ENST00000434813 DLGAP3O95886 979 aa17.38■□□□□ 0.37
CLK1-205ENST00000434813 CPN2P22792 545 aa17.38■□□□□ 0.37
CLK1-205ENST00000434813 FPR3P25089 353 aa17.38■□□□□ 0.37
CLK1-205ENST00000434813 AVPR1BP47901 424 aa17.38■□□□□ 0.37
CLK1-205ENST00000434813 EIF2B2P49770 351 aaKnown RBP17.38■□□□□ 0.37
CLK1-205ENST00000434813 RORCP51449 518 aa17.38■□□□□ 0.37
CLK1-205ENST00000434813 WNT4P56705 351 aa17.38■□□□□ 0.37
CLK1-205ENST00000434813 RGS8P57771 180 aaPredicted RBP17.38■□□□□ 0.37
CLK1-205ENST00000434813 SNRPNP63162 240 aaKnown RBP17.38■□□□□ 0.37
CLK1-205ENST00000434813 BNC1Q01954 994 aa17.38■□□□□ 0.37
CLK1-205ENST00000434813 SFSWAPQ12872 951 aaKnown RBP17.38■□□□□ 0.37
CLK1-205ENST00000434813 MEX3DQ86XN8 651 aaKnown RBP17.38■□□□□ 0.37
CLK1-205ENST00000434813 OR2L13Q8N349 312 aa17.38■□□□□ 0.37
CLK1-205ENST00000434813 ACOT11Q8WXI4 607 aaPredicted RBP17.38■□□□□ 0.37
CLK1-205ENST00000434813 RNFT2Q96EX2 444 aa17.38■□□□□ 0.37
CLK1-205ENST00000434813 FAM46AQ96IP4 442 aaKnown RBP17.38■□□□□ 0.37
CLK1-205ENST00000434813 OR2A5Q96R48 311 aa17.38■□□□□ 0.37
CLK1-205ENST00000434813 SDHCQ99643 169 aaPredicted RBP17.38■□□□□ 0.37
CLK1-205ENST00000434813 PRDM9Q9NQV7 894 aa17.38■□□□□ 0.37
CLK1-205ENST00000434813 CD207Q9UJ71 328 aa17.38■□□□□ 0.37
CLK1-205ENST00000434813 ZNF443Q9Y2A4 671 aaPredicted RBP17.38■□□□□ 0.37
CLK1-205ENST00000434813 CAB39Q9Y376 341 aaPredicted RBP17.38■□□□□ 0.37
CLK1-205ENST00000434813 ATG2BQ96BY7 2078 aa17.38■□□□□ 0.37
CLK1-205ENST00000434813 A6NCN8 305 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms