RNA–Protein interactions for RNA: ENST00000433535.6

RPUSD3-206, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-206ENST00000433535 SFXN2Q96NB2 322 aa19.8■□□□□ 0.76
RPUSD3-206ENST00000433535 BBS4Q96RK4 519 aa19.8■□□□□ 0.76
RPUSD3-206ENST00000433535 FOXC2Q99958 501 aa19.8■□□□□ 0.76
RPUSD3-206ENST00000433535 JKAMPQ9P055 326 aa19.8■□□□□ 0.76
RPUSD3-206ENST00000433535 DKKL1Q9UK85 242 aa19.8■□□□□ 0.76
RPUSD3-206ENST00000433535 OR10H1Q9Y4A9 318 aa19.8■□□□□ 0.76
RPUSD3-206ENST00000433535 PRRC2AP48634 2157 aaKnown RBP19.8■□□□□ 0.76
RPUSD3-206ENST00000433535 A0A1W2PPM1 405 aa19.79■□□□□ 0.76
RPUSD3-206ENST00000433535 G3V2L1 256 aa19.79■□□□□ 0.76
RPUSD3-206ENST00000433535 PLOD3O60568 738 aa19.79■□□□□ 0.76
RPUSD3-206ENST00000433535 IL18BPO95998 194 aa19.79■□□□□ 0.76
RPUSD3-206ENST00000433535 JUNP05412 331 aaKnown RBP19.79■□□□□ 0.76
RPUSD3-206ENST00000433535 DDCP20711 480 aa19.79■□□□□ 0.76
RPUSD3-206ENST00000433535 MC3RP41968 323 aa19.79■□□□□ 0.76
RPUSD3-206ENST00000433535 LHX2P50458 406 aa19.79■□□□□ 0.76
RPUSD3-206ENST00000433535 EFR3AQ14156 821 aa19.79■□□□□ 0.76
RPUSD3-206ENST00000433535 SH2D4BQ5SQS7 431 aa19.79■□□□□ 0.76
RPUSD3-206ENST00000433535 ZYG11AQ6WRX3 759 aa19.79■□□□□ 0.76
RPUSD3-206ENST00000433535 ADGRE4PQ86SQ3 457 aa19.79■□□□□ 0.76
RPUSD3-206ENST00000433535 KIF18BQ86Y91 864 aa19.79■□□□□ 0.76
RPUSD3-206ENST00000433535 GCNT2Q8N0V5 402 aa19.79■□□□□ 0.76
RPUSD3-206ENST00000433535 GOT1L1Q8NHS2 421 aaPredicted RBP19.79■□□□□ 0.76
RPUSD3-206ENST00000433535 RNF138Q8WVD3 245 aa19.79■□□□□ 0.76
RPUSD3-206ENST00000433535 CXXC4Q9H2H0 198 aa19.79■□□□□ 0.76
RPUSD3-206ENST00000433535 TAS2R9Q9NYW1 312 aa19.79■□□□□ 0.76
RPUSD3-206ENST00000433535 CLCF1Q9UBD9 225 aa19.79■□□□□ 0.76
RPUSD3-206ENST00000433535 RPH3AQ9Y2J0 694 aaPredicted RBP19.79■□□□□ 0.76
RPUSD3-206ENST00000433535 POLR3HQ9Y535 204 aaPredicted RBP19.79■□□□□ 0.76
RPUSD3-206ENST00000433535 HRNRQ86YZ3 2850 aaPredicted RBP19.79■□□□□ 0.76
RPUSD3-206ENST00000433535 MPDZO75970 2070 aa19.79■□□□□ 0.76
RPUSD3-206ENST00000433535 ITPR3Q14573 2671 aa19.78■□□□□ 0.76
RPUSD3-206ENST00000433535 SCO2O43819 266 aa19.78■□□□□ 0.76
RPUSD3-206ENST00000433535 MYL2P10916 166 aa19.78■□□□□ 0.76
RPUSD3-206ENST00000433535 MPIP34949 423 aa19.78■□□□□ 0.76
RPUSD3-206ENST00000433535 NCBP2P52298 156 aaKnown RBP eCLIP19.78■□□□□ 0.763e-6■■■■□ 21.7
RPUSD3-206ENST00000433535 GAS1P54826 345 aa19.78■□□□□ 0.76
RPUSD3-206ENST00000433535 CLDN18P56856 261 aa19.78■□□□□ 0.76
RPUSD3-206ENST00000433535 VSNL1P62760 191 aa19.78■□□□□ 0.76
RPUSD3-206ENST00000433535 PSG6Q00889 435 aa19.78■□□□□ 0.76
RPUSD3-206ENST00000433535 C2orf80Q0P641 193 aa19.78■□□□□ 0.76
RPUSD3-206ENST00000433535 IMPG1Q17R60 797 aa19.78■□□□□ 0.76
RPUSD3-206ENST00000433535 FBXW10Q5XX13 1052 aa19.78■□□□□ 0.76
RPUSD3-206ENST00000433535 TMEM107Q6UX40 140 aa19.78■□□□□ 0.76
RPUSD3-206ENST00000433535 LUZP2Q86TE4 346 aa19.78■□□□□ 0.76
RPUSD3-206ENST00000433535 INTS12Q96CB8 462 aaKnown RBP19.78■□□□□ 0.76
RPUSD3-206ENST00000433535 TM9SF2Q99805 663 aa19.78■□□□□ 0.76
RPUSD3-206ENST00000433535 SFXN3Q9BWM7 321 aa19.78■□□□□ 0.76
RPUSD3-206ENST00000433535 MIEF1Q9NQG6 463 aa19.78■□□□□ 0.76
RPUSD3-206ENST00000433535 SIRT5Q9NXA8 310 aa19.78■□□□□ 0.76
RPUSD3-206ENST00000433535 FLRT3Q9NZU0 649 aa19.78■□□□□ 0.76
RPUSD3-206ENST00000433535 DCDC2Q9UHG0 476 aa19.78■□□□□ 0.76
RPUSD3-206ENST00000433535 SETD2Q9BYW2 2564 aaPredicted RBP19.77■□□□□ 0.76
RPUSD3-206ENST00000433535 SERTM1A2A2V5 107 aa19.77■□□□□ 0.76
RPUSD3-206ENST00000433535 MYO1GB0I1T2 1018 aa19.77■□□□□ 0.76
RPUSD3-206ENST00000433535 PLOD2O00469 737 aa19.77■□□□□ 0.76
RPUSD3-206ENST00000433535 DIAPH2O60879 1101 aa19.77■□□□□ 0.76
RPUSD3-206ENST00000433535 COQ9O75208 318 aa19.77■□□□□ 0.76
RPUSD3-206ENST00000433535 GLRA3O75311 464 aa19.77■□□□□ 0.76
RPUSD3-206ENST00000433535 ZNF708P17019 499 aa19.77■□□□□ 0.76
RPUSD3-206ENST00000433535 DPP4P27487 766 aa19.77■□□□□ 0.76
RPUSD3-206ENST00000433535 EVI2BP34910 448 aa19.77■□□□□ 0.76
RPUSD3-206ENST00000433535 GSTM5P46439 218 aa19.77■□□□□ 0.76
RPUSD3-206ENST00000433535 PNLIPRP2P54317 469 aa19.77■□□□□ 0.76
RPUSD3-206ENST00000433535 SORDQ00796 357 aa19.77■□□□□ 0.76
RPUSD3-206ENST00000433535 DAZAP2Q15038 168 aaPredicted RBP19.77■□□□□ 0.76
RPUSD3-206ENST00000433535 FAM71E1Q6IPT2 247 aa19.77■□□□□ 0.76
RPUSD3-206ENST00000433535 AAGABQ6PD74 315 aa19.77■□□□□ 0.76
RPUSD3-206ENST00000433535 FRMD7Q6ZUT3 714 aa19.77■□□□□ 0.76
RPUSD3-206ENST00000433535 MED12LQ86YW9 2145 aa19.77■□□□□ 0.76
RPUSD3-206ENST00000433535 RBM24Q9BX46 236 aaKnown RBP19.77■□□□□ 0.76
RPUSD3-206ENST00000433535 STMN4Q9H169 189 aaPredicted RBP19.77■□□□□ 0.76
RPUSD3-206ENST00000433535 TNFRSF12AQ9NP84 129 aa19.77■□□□□ 0.76
RPUSD3-206ENST00000433535 GALNT8Q9NY28 637 aa19.77■□□□□ 0.76
RPUSD3-206ENST00000433535 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.77■□□□□ 0.76
RPUSD3-206ENST00000433535 V9GYY5 206 aaPredicted RBP19.77■□□□□ 0.76
RPUSD3-206ENST00000433535 CRCPO75575 148 aa19.76■□□□□ 0.75
RPUSD3-206ENST00000433535 RCBTB2O95199 551 aa19.76■□□□□ 0.75
RPUSD3-206ENST00000433535 PROCP04070 461 aa19.76■□□□□ 0.75
RPUSD3-206ENST00000433535 EPXP11678 715 aa19.76■□□□□ 0.75
RPUSD3-206ENST00000433535 DNASE1P24855 282 aa19.76■□□□□ 0.75
RPUSD3-206ENST00000433535 CPA2P48052 419 aa19.76■□□□□ 0.75
RPUSD3-206ENST00000433535 PSPHP78330 225 aa19.76■□□□□ 0.75
RPUSD3-206ENST00000433535 STX5Q13190 355 aa19.76■□□□□ 0.75
RPUSD3-206ENST00000433535 GRAMD2AQ8IUY3 354 aa19.76■□□□□ 0.75
RPUSD3-206ENST00000433535 OR4K17Q8NGC6 315 aa19.76■□□□□ 0.75
RPUSD3-206ENST00000433535 WNT2BQ93097 391 aa19.76■□□□□ 0.75
RPUSD3-206ENST00000433535 CCDC126Q96EE4 140 aa19.76■□□□□ 0.75
RPUSD3-206ENST00000433535 ZFP3Q96NJ6 502 aa19.76■□□□□ 0.75
RPUSD3-206ENST00000433535 SHCBP1LQ9BZQ2 653 aa19.76■□□□□ 0.75
RPUSD3-206ENST00000433535 C12orf65Q9H3J6 166 aaKnown RBP19.76■□□□□ 0.75
RPUSD3-206ENST00000433535 MYNNQ9NPC7 610 aa19.76■□□□□ 0.75
RPUSD3-206ENST00000433535 PPP4R1LQ9P1A2 415 aa19.76■□□□□ 0.75
RPUSD3-206ENST00000433535 A0A087WV62 115 aa19.75■□□□□ 0.75
RPUSD3-206ENST00000433535 ZIC3O60481 467 aa19.75■□□□□ 0.75
RPUSD3-206ENST00000433535 SHBGP04278 402 aa19.75■□□□□ 0.75
RPUSD3-206ENST00000433535 CD99P14209 185 aa19.75■□□□□ 0.75
RPUSD3-206ENST00000433535 NTSP30990 170 aa19.75■□□□□ 0.75
RPUSD3-206ENST00000433535 B3GALT5-AS1P59052 145 aa19.75■□□□□ 0.75
RPUSD3-206ENST00000433535 WDR93Q6P2C0 686 aa19.75■□□□□ 0.75
RPUSD3-206ENST00000433535 PAMR1Q6UXH9 720 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms