RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 KIF5BP33176 963 aa2.54□□□□□ -2
HMGB1P27-201ENST00000431429 SAA4P35542 130 aa2.54□□□□□ -2
HMGB1P27-201ENST00000431429 VCPP55072 806 aaKnown RBP2.54□□□□□ -2
HMGB1P27-201ENST00000431429 HAND2P61296 217 aa2.54□□□□□ -2
HMGB1P27-201ENST00000431429 MRPS6P82932 125 aaKnown RBP2.54□□□□□ -2
HMGB1P27-201ENST00000431429 ECSCRQ19T08 205 aa2.54□□□□□ -2
HMGB1P27-201ENST00000431429 TAF3Q5VWG9 929 aa2.54□□□□□ -2
HMGB1P27-201ENST00000431429 DMKNQ6E0U4 476 aaPredicted RBP2.54□□□□□ -2
HMGB1P27-201ENST00000431429 LRRC8BQ6P9F7 803 aa2.54□□□□□ -2
HMGB1P27-201ENST00000431429 ADAMTSL5Q6ZMM2 481 aa2.54□□□□□ -2
HMGB1P27-201ENST00000431429 NET1Q7Z628 596 aaPredicted RBP2.54□□□□□ -2
HMGB1P27-201ENST00000431429 GPBP1Q86WP2 473 aa2.54□□□□□ -2
HMGB1P27-201ENST00000431429 Q8N377 158 aa2.54□□□□□ -2
HMGB1P27-201ENST00000431429 BANPQ8N9N5 519 aa2.54□□□□□ -2
HMGB1P27-201ENST00000431429 ICA1LQ8NDH6 482 aa2.54□□□□□ -2
HMGB1P27-201ENST00000431429 OR5AU1Q8NGC0 362 aa2.54□□□□□ -2
HMGB1P27-201ENST00000431429 OR2T34Q8NGX1 318 aa2.54□□□□□ -2
HMGB1P27-201ENST00000431429 FNDC8Q8TC99 324 aa2.54□□□□□ -2
HMGB1P27-201ENST00000431429 FCGR1BQ92637 280 aa2.54□□□□□ -2
HMGB1P27-201ENST00000431429 BIRC7Q96CA5 298 aa2.54□□□□□ -2
HMGB1P27-201ENST00000431429 TRIM44Q96DX7 344 aaPredicted RBP2.54□□□□□ -2
HMGB1P27-201ENST00000431429 SLC45A3Q96JT2 553 aa2.54□□□□□ -2
HMGB1P27-201ENST00000431429 LINC00479Q96M42 142 aa2.54□□□□□ -2
HMGB1P27-201ENST00000431429 ATF6BQ99941 703 aa2.54□□□□□ -2
HMGB1P27-201ENST00000431429 HSD17B14Q9BPX1 270 aa2.54□□□□□ -2
HMGB1P27-201ENST00000431429 THUMPD2Q9BTF0 503 aaKnown RBP2.54□□□□□ -2
HMGB1P27-201ENST00000431429 STRADBQ9C0K7 418 aa2.54□□□□□ -2
HMGB1P27-201ENST00000431429 COG4Q9H9E3 785 aa2.54□□□□□ -2
HMGB1P27-201ENST00000431429 TRPV5Q9NQA5 729 aa2.54□□□□□ -2
HMGB1P27-201ENST00000431429 TXLNGQ9NUQ3 528 aa2.54□□□□□ -2
HMGB1P27-201ENST00000431429 CGNQ9P2M7 1197 aaKnown RBP2.54□□□□□ -2
HMGB1P27-201ENST00000431429 FZR1Q9UM11 496 aa2.54□□□□□ -2
HMGB1P27-201ENST00000431429 EP400Q96L91 3159 aa2.54□□□□□ -2
HMGB1P27-201ENST00000431429 CEP350Q5VT06 3117 aa2.54□□□□□ -2
HMGB1P27-201ENST00000431429 TET3O43151 1660 aa2.53□□□□□ -2
HMGB1P27-201ENST00000431429 EFCAB6Q5THR3 1501 aa2.53□□□□□ -2
HMGB1P27-201ENST00000431429 CAMSAP2Q08AD1 1489 aa2.53□□□□□ -2
HMGB1P27-201ENST00000431429 METP08581 1390 aa2.53□□□□□ -2
HMGB1P27-201ENST00000431429 ESYT2A0FGR8 921 aa2.53□□□□□ -2
HMGB1P27-201ENST00000431429 H0YL77 283 aa2.53□□□□□ -2
HMGB1P27-201ENST00000431429 CPLX1O14810 134 aa2.53□□□□□ -2
HMGB1P27-201ENST00000431429 DUSP11O75319 330 aaKnown RBP2.53□□□□□ -2
HMGB1P27-201ENST00000431429 IGHV3-9P01782 118 aa2.53□□□□□ -2
HMGB1P27-201ENST00000431429 SLC35G4P0C7Q5 338 aa2.53□□□□□ -2
HMGB1P27-201ENST00000431429 ADORA3P0DMS8 318 aa2.53□□□□□ -2
HMGB1P27-201ENST00000431429 AXLP30530 894 aa2.53□□□□□ -2
HMGB1P27-201ENST00000431429 RFC2P35250 354 aa2.53□□□□□ -2
HMGB1P27-201ENST00000431429 PTGFRP43088 359 aa2.53□□□□□ -2
HMGB1P27-201ENST00000431429 TRPC1P48995 793 aa2.53□□□□□ -2
HMGB1P27-201ENST00000431429 CSRP3P50461 194 aa2.53□□□□□ -2
HMGB1P27-201ENST00000431429 ATP4BP51164 291 aa2.53□□□□□ -2
HMGB1P27-201ENST00000431429 PEX3P56589 373 aa2.53□□□□□ -2
HMGB1P27-201ENST00000431429 ELAVL2Q12926 359 aaKnown RBP2.53□□□□□ -2
HMGB1P27-201ENST00000431429 BTG3Q14201 252 aaPredicted RBP2.53□□□□□ -2
HMGB1P27-201ENST00000431429 EMC2Q15006 297 aa2.53□□□□□ -2
HMGB1P27-201ENST00000431429 MRGPRG-AS1Q2M3A8 158 aa2.53□□□□□ -2
HMGB1P27-201ENST00000431429 HSP90AA5PQ58FG0 334 aa2.53□□□□□ -2
HMGB1P27-201ENST00000431429 C9orf66Q5T8R8 295 aa2.53□□□□□ -2
HMGB1P27-201ENST00000431429 AGAP7PQ5VUJ5 663 aa2.53□□□□□ -2
HMGB1P27-201ENST00000431429 RFWD3Q6PCD5 774 aa2.53□□□□□ -2
HMGB1P27-201ENST00000431429 HACD2Q6Y1H2 254 aa2.53□□□□□ -2
HMGB1P27-201ENST00000431429 STOX1Q6ZVD7 989 aa2.53□□□□□ -2
HMGB1P27-201ENST00000431429 SPEM1Q8N4L4 309 aa2.53□□□□□ -2
HMGB1P27-201ENST00000431429 FAM133AQ8N9E0 248 aa2.53□□□□□ -2
HMGB1P27-201ENST00000431429 CSNK1G2-AS1Q8NCQ2 148 aa2.53□□□□□ -2
HMGB1P27-201ENST00000431429 ZNF248Q8NDW4 579 aa2.53□□□□□ -2
HMGB1P27-201ENST00000431429 STKLD1Q8NE28 680 aa2.53□□□□□ -2
HMGB1P27-201ENST00000431429 C17orf47Q8NEP4 570 aa2.53□□□□□ -2
HMGB1P27-201ENST00000431429 MIPOL1Q8TD10 442 aa2.53□□□□□ -2
HMGB1P27-201ENST00000431429 NR4A3Q92570 626 aa2.53□□□□□ -2
HMGB1P27-201ENST00000431429 PINX1Q96BK5 328 aaKnown RBP2.53□□□□□ -2
HMGB1P27-201ENST00000431429 VSTM2LQ96N03 204 aa2.53□□□□□ -2
HMGB1P27-201ENST00000431429 TSPAN18Q96SJ8 248 aa2.53□□□□□ -2
HMGB1P27-201ENST00000431429 CRACR2AQ9BSW2 395 aa2.53□□□□□ -2
HMGB1P27-201ENST00000431429 LIME1Q9H400 295 aa2.53□□□□□ -2
HMGB1P27-201ENST00000431429 RWDD1Q9H446 243 aaPredicted RBP2.53□□□□□ -2
HMGB1P27-201ENST00000431429 GPN2Q9H9Y4 310 aaPredicted RBP2.53□□□□□ -2
HMGB1P27-201ENST00000431429 CENPMQ9NSP4 180 aa2.53□□□□□ -2
HMGB1P27-201ENST00000431429 NUDT4Q9NZJ9 180 aa2.53□□□□□ -2
HMGB1P27-201ENST00000431429 RNF6Q9Y252 685 aa2.53□□□□□ -2
HMGB1P27-201ENST00000431429 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.53□□□□□ -2
HMGB1P27-201ENST00000431429 STRCP1A6NGW2 1772 aa2.53□□□□□ -2
HMGB1P27-201ENST00000431429 ASXL1Q8IXJ9 1541 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 SYCP2Q9BX26 1530 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 MBD5Q9P267 1494 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 SNED1Q8TER0 1413 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 CASKIN1Q8WXD9 1431 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 TTC26A0AVF1 554 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 NDUFAF8A1L188 74 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 LRIT2A6NDA9 550 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 LRRC30A6NM36 301 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 FOXI3A8MTJ6 420 aaPredicted RBP2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 TMCO5BA8MYB1 307 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 NPIPA2E9PIF3 369 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 H3BMH7 237 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 H7C423 109 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 CTAGE5O15320 804 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 RANBP6O60518 1105 aaKnown RBP2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 RAMP1O60894 148 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms