RNA–Protein interactions for RNA: ENST00000431357.1

USP4-205, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 5

Gene USP4, Length 2,141 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-205ENST00000431357 CLCA2Q9UQC9 943 aa10.61□□□□□ -0.71
USP4-205ENST00000431357 PCDHGB7Q9Y5F8 929 aa10.61□□□□□ -0.71
USP4-205ENST00000431357 COL4A3Q01955 1670 aa10.61□□□□□ -0.71
USP4-205ENST00000431357 DENND4AQ7Z401 1863 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 LINC00854A0A1B0GVQ3 168 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 GSAPA4D1B5 854 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 CASKO14936 926 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 PROM1O43490 865 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 AKAP8O43823 692 aaKnown RBP10.6□□□□□ -0.71
USP4-205ENST00000431357 ICMTO60725 284 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 EPCAMP16422 314 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 NAGAP17050 411 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 GALP22466 123 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 FPR3P25089 353 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 ITGB8P26012 769 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 PRKAR1BP31321 381 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 MPIP34949 423 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 AHRP35869 848 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 SLC1A3P43003 542 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 CDH11P55287 796 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 FABP5Q01469 135 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 TGM3Q08188 693 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 DECR1Q16698 335 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 CCNJQ5T5M9 372 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 ZNF697Q5TEC3 545 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 MZT2BQ6NZ67 158 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 ABHD17CQ6PCB6 329 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 GALNT12Q8IXK2 581 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 KLHL36Q8N4N3 616 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 CAMKK1Q8N5S9 505 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 ZNF485Q8NCK3 441 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 PSD4Q8NDX1 1056 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 C19orf18Q8NEA5 215 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 OR8D4Q8NGM9 314 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 OR52P1PQ8NH57 321 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 DIO2Q92813 273 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 MS4A6EQ96DS6 147 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 C12orf66Q96MD2 445 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 OR7D2Q96RA2 312 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 INSM2Q96T92 566 aaPredicted RBP10.6□□□□□ -0.71
USP4-205ENST00000431357 NRTNQ99748 197 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 SOSTQ9BQB4 213 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 YIPF4Q9BSR8 244 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 LGR4Q9BXB1 951 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 B3GNT4Q9C0J1 378 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 AICDAQ9GZX7 198 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 CRISPLD2Q9H0B8 497 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 SLA2Q9H6Q3 261 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 DIABLOQ9NR28 239 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 TM7SF3Q9NS93 570 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 ASB6Q9NWX5 421 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 TOR4AQ9NXH8 423 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 ADAM30Q9UKF2 790 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 POLHQ9Y253 713 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 EXOGQ9Y2C4 368 aaKnown RBP10.6□□□□□ -0.71
USP4-205ENST00000431357 NINQ8N4C6 2090 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 BRCA2P51587 3418 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 IGKV1-8A0A0C4DH67 115 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 A0A1W2PR48 441 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 TFECO14948 347 aaPredicted RBP10.6□□□□□ -0.71
USP4-205ENST00000431357 ERI3O43414 337 aaKnown RBP10.6□□□□□ -0.71
USP4-205ENST00000431357 KCNJ13O60928 360 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 HMGN1P05114 100 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 CCNYL3P0C7X3 344 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 CPN2P22792 545 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 ATP5A1P25705 553 aaKnown RBP10.6□□□□□ -0.71
USP4-205ENST00000431357 PKLRP30613 574 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 NUDT1P36639 197 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 OMPP47874 163 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 LSM11P83369 360 aaKnown RBP eCLIP10.6□□□□□ -0.71
USP4-205ENST00000431357 MESP2Q0VG99 397 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 RIN1Q13671 783 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 AGERQ15109 404 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 WSCD2Q2TBF2 565 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 PIP5KL1Q5T9C9 394 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 AADACL4Q5VUY2 407 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 TRIQKQ629K1 86 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 SLC48A1Q6P1K1 146 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 NOXA1Q86UR1 476 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 CCDC116Q8IYX3 515 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 ACOT4Q8N9L9 421 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 OR2L5Q8NG80 312 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 OR52N1Q8NH53 320 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 ACOT11Q8WXI4 607 aaPredicted RBP10.6□□□□□ -0.71
USP4-205ENST00000431357 CNRIP1Q96F85 164 aaPredicted RBP10.6□□□□□ -0.71
USP4-205ENST00000431357 OTUB1Q96FW1 271 aaPredicted RBP10.6□□□□□ -0.71
USP4-205ENST00000431357 TIMM29Q9BSF4 260 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 SARGQ9BW04 601 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 JAM3Q9BX67 310 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 SLC38A1Q9H2H9 487 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 KLHL31Q9H511 634 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 MRPS30Q9NP92 439 aaKnown RBP10.6□□□□□ -0.71
USP4-205ENST00000431357 PRDM7Q9NQW5 492 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 CTPS2Q9NRF8 586 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 SEMA4GQ9NTN9 838 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 DPP7Q9UHL4 492 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 CES1P1Q9UKY3 287 aa10.6□□□□□ -0.71
USP4-205ENST00000431357 YARS2Q9Y2Z4 477 aaKnown RBP10.6□□□□□ -0.71
USP4-205ENST00000431357 MUC22E2RYF6 1773 aaPredicted RBP10.59□□□□□ -0.71
USP4-205ENST00000431357 IGLON5A6NGN9 336 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms