RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 SYT14P1Q58G82 188 aa8.18□□□□□ -1.1
GABPB1-205ENST00000429662 METRNLQ641Q3 311 aa8.18□□□□□ -1.1
GABPB1-205ENST00000429662 MZT2BQ6NZ67 158 aa8.18□□□□□ -1.1
GABPB1-205ENST00000429662 SLC27A4Q6P1M0 643 aa8.18□□□□□ -1.1
GABPB1-205ENST00000429662 MZT2AQ6P582 158 aa8.18□□□□□ -1.1
GABPB1-205ENST00000429662 FAM131AQ6UXB0 335 aa8.18□□□□□ -1.1
GABPB1-205ENST00000429662 RASSF6Q6ZTQ3 369 aa8.18□□□□□ -1.1
GABPB1-205ENST00000429662 C11orf96Q7Z7L8 435 aa8.18□□□□□ -1.1
GABPB1-205ENST00000429662 RDH10Q8IZV5 341 aa8.18□□□□□ -1.1
GABPB1-205ENST00000429662 VWA5B2Q8N398 1253 aa8.18□□□□□ -1.1
GABPB1-205ENST00000429662 CLIP4Q8N3C7 705 aa8.18□□□□□ -1.1
GABPB1-205ENST00000429662 CELF2-AS1Q8N7Q2 184 aa8.18□□□□□ -1.1
GABPB1-205ENST00000429662 ZNF740Q8NDX6 193 aa8.18□□□□□ -1.1
GABPB1-205ENST00000429662 OR4K5Q8NGD3 323 aa8.18□□□□□ -1.1
GABPB1-205ENST00000429662 VANGL1Q8TAA9 524 aaPredicted RBP8.18□□□□□ -1.1
GABPB1-205ENST00000429662 SLC7A13Q8TCU3 470 aa8.18□□□□□ -1.1
GABPB1-205ENST00000429662 GPR151Q8TDV0 419 aa8.18□□□□□ -1.1
GABPB1-205ENST00000429662 CAPSLQ8WWF8 208 aa8.18□□□□□ -1.1
GABPB1-205ENST00000429662 SORCS1Q8WY21 1168 aa8.18□□□□□ -1.1
GABPB1-205ENST00000429662 OSTF1Q92882 214 aa8.18□□□□□ -1.1
GABPB1-205ENST00000429662 FGF11Q92914 225 aa8.18□□□□□ -1.1
GABPB1-205ENST00000429662 TRIM63Q969Q1 353 aa8.18□□□□□ -1.1
GABPB1-205ENST00000429662 ARRDC3Q96B67 414 aa8.18□□□□□ -1.1
GABPB1-205ENST00000429662 TCEAL4Q96EI5 215 aa8.18□□□□□ -1.1
GABPB1-205ENST00000429662 OTUB1Q96FW1 271 aaPredicted RBP8.18□□□□□ -1.1
GABPB1-205ENST00000429662 MYADMQ96S97 322 aa8.18□□□□□ -1.1
GABPB1-205ENST00000429662 TRAF4Q9BUZ4 470 aaPredicted RBP8.18□□□□□ -1.1
GABPB1-205ENST00000429662 JAM3Q9BX67 310 aa8.18□□□□□ -1.1
GABPB1-205ENST00000429662 BARHL1Q9BZE3 327 aa8.18□□□□□ -1.1
GABPB1-205ENST00000429662 OR51I1Q9H343 314 aa8.18□□□□□ -1.1
GABPB1-205ENST00000429662 TP63Q9H3D4 680 aaPredicted RBP8.18□□□□□ -1.1
GABPB1-205ENST00000429662 SLA2Q9H6Q3 261 aa8.18□□□□□ -1.1
GABPB1-205ENST00000429662 SLC35C2Q9NQQ7 365 aa8.18□□□□□ -1.1
GABPB1-205ENST00000429662 PRDM8Q9NQV8 689 aa8.18□□□□□ -1.1
GABPB1-205ENST00000429662 GIMAP4Q9NUV9 329 aa8.18□□□□□ -1.1
GABPB1-205ENST00000429662 TAC3Q9UHF0 121 aa8.18□□□□□ -1.1
GABPB1-205ENST00000429662 CLEC2DQ9UHP7 191 aa8.18□□□□□ -1.1
GABPB1-205ENST00000429662 SLC6A14Q9UN76 642 aa8.18□□□□□ -1.1
GABPB1-205ENST00000429662 ITM2BQ9Y287 266 aa8.18□□□□□ -1.1
GABPB1-205ENST00000429662 ASB4Q9Y574 426 aa8.18□□□□□ -1.1
GABPB1-205ENST00000429662 WNT6Q9Y6F9 365 aa8.18□□□□□ -1.1
GABPB1-205ENST00000429662 TICRRQ7Z2Z1 1910 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 F5P12259 2224 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 SPAG17Q6Q759 2223 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 EML5Q05BV3 1969 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 MEIOCA2RUB1 952 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 KDM4EB2RXH2 506 aaPredicted RBP8.17□□□□□ -1.1
GABPB1-205ENST00000429662 FAM25AB3EWG3 89 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 FAM25CB3EWG5 89 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 FAM25GB3EWG6 89 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 PRKYO43930 277 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 SOX14O95416 240 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 TBX6O95947 436 aaPredicted RBP8.17□□□□□ -1.1
GABPB1-205ENST00000429662 HMGN1P05114 100 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 YES1P07947 543 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 FHP07954 510 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 ADRA2AP08913 450 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 HBQ1P09105 142 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 SLC35G4P0C7Q5 338 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 FUT4P22083 530 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 MMP11P24347 488 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 CAPZA2P47755 286 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 TAS2R38P59533 333 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 PRR5P85299 388 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 INSM1Q01101 510 aaPredicted RBP8.17□□□□□ -1.1
GABPB1-205ENST00000429662 BDH1Q02338 343 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 TGM3Q08188 693 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 DMPKQ09013 629 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 DMWDQ09019 674 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 SPEM2Q0P670 501 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 ST3GAL3Q11203 375 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 TSPAN31Q12999 210 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 RIN1Q13671 783 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 SLC9A5Q14940 896 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 FNDC3BQ53EP0 1204 aaKnown RBP8.17□□□□□ -1.1
GABPB1-205ENST00000429662 ATAT1Q5SQI0 421 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 SLC35F1Q5T1Q4 408 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 ATAD3CQ5T2N8 411 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 C9orf64Q5T6V5 341 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 LCN1P1Q5VSP4 162 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 LIPKQ5VXJ0 399 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 TIGD3Q6B0B8 471 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 KIAA1161Q6NSJ0 714 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 CD200R1LQ6Q8B3 271 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 QSOX2Q6ZRP7 698 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 GET4Q7L5D6 327 aaPredicted RBP8.17□□□□□ -1.1
GABPB1-205ENST00000429662 PRICKLE2Q7Z3G6 844 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 NRARPQ7Z6K4 114 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 ZER1Q7Z7L7 766 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 NLGN4XQ8N0W4 816 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 ANKRD53Q8N9V6 530 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 MORN4Q8NDC4 146 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 OR5AR1Q8NGP9 310 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 GRPEL2Q8TAA5 225 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 XAGE5Q8WWM1 108 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 RAB8BQ92930 207 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 EXOSC8Q96B26 276 aaKnown RBP8.17□□□□□ -1.1
GABPB1-205ENST00000429662 RNFT2Q96EX2 444 aa8.17□□□□□ -1.1
GABPB1-205ENST00000429662 ZC3HAV1LQ96H79 300 aaKnown RBP8.17□□□□□ -1.1
GABPB1-205ENST00000429662 DIRAS2Q96HU8 199 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms