RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 IQCF1Q8N6M8 205 aa12.82□□□□□ -0.36
THBS3-202ENST00000428962 PROKR2Q8NFJ6 384 aa12.82□□□□□ -0.36
THBS3-202ENST00000428962 OR7G2Q8NG99 324 aa12.82□□□□□ -0.36
THBS3-202ENST00000428962 RPLP0P6Q8NHW5 317 aa12.82□□□□□ -0.36
THBS3-202ENST00000428962 COL26A1Q96A83 441 aa12.82□□□□□ -0.36
THBS3-202ENST00000428962 SLC35A4Q96G79 324 aa12.82□□□□□ -0.36
THBS3-202ENST00000428962 OPALINQ96PE5 141 aa12.82□□□□□ -0.36
THBS3-202ENST00000428962 CENPOQ9BU64 300 aa12.82□□□□□ -0.36
THBS3-202ENST00000428962 GSDMCQ9BYG8 508 aa12.82□□□□□ -0.36
THBS3-202ENST00000428962 ARMC7Q9H6L4 198 aa12.82□□□□□ -0.36
THBS3-202ENST00000428962 SEC14L4Q9UDX3 406 aa12.82□□□□□ -0.36
THBS3-202ENST00000428962 PILRAQ9UKJ1 303 aa12.82□□□□□ -0.36
THBS3-202ENST00000428962 DAPP1Q9UN19 280 aa12.82□□□□□ -0.36
THBS3-202ENST00000428962 DIMT1Q9UNQ2 313 aaKnown RBP12.82□□□□□ -0.36
THBS3-202ENST00000428962 SLC22A7Q9Y694 548 aa12.82□□□□□ -0.36
THBS3-202ENST00000428962 MTCH2Q9Y6C9 303 aa12.82□□□□□ -0.36
THBS3-202ENST00000428962 NINQ8N4C6 2090 aa12.82□□□□□ -0.36
THBS3-202ENST00000428962 ATG2BQ96BY7 2078 aa12.82□□□□□ -0.36
THBS3-202ENST00000428962 A0A087WUU8 490 aa12.81□□□□□ -0.36
THBS3-202ENST00000428962 ISPDA4D126 451 aa12.81□□□□□ -0.36
THBS3-202ENST00000428962 CPSF4LA6NMK7 179 aaKnown RBP12.81□□□□□ -0.36
THBS3-202ENST00000428962 KIAA0513O60268 411 aa12.81□□□□□ -0.36
THBS3-202ENST00000428962 CTSVO60911 334 aa12.81□□□□□ -0.36
THBS3-202ENST00000428962 CSO75390 466 aaKnown RBP12.81□□□□□ -0.36
THBS3-202ENST00000428962 OR5F1O95221 314 aa12.81□□□□□ -0.36
THBS3-202ENST00000428962 TNFP01375 233 aa12.81□□□□□ -0.36
THBS3-202ENST00000428962 CDH3P22223 829 aa12.81□□□□□ -0.36
THBS3-202ENST00000428962 PDX1P52945 283 aa12.81□□□□□ -0.36
THBS3-202ENST00000428962 PRKCDQ05655 676 aa12.81□□□□□ -0.36
THBS3-202ENST00000428962 CCDC85BQ15834 202 aaPredicted RBP12.81□□□□□ -0.36
THBS3-202ENST00000428962 DECR1Q16698 335 aa12.81□□□□□ -0.36
THBS3-202ENST00000428962 TMEM44Q2T9K0 475 aa12.81□□□□□ -0.36
THBS3-202ENST00000428962 ARHGAP11BQ3KRB8 267 aa12.81□□□□□ -0.36
THBS3-202ENST00000428962 SYT14P1Q58G82 188 aa12.81□□□□□ -0.36
THBS3-202ENST00000428962 MANEAQ5SRI9 462 aa12.81□□□□□ -0.36
THBS3-202ENST00000428962 C6orf132Q5T0Z8 1188 aa12.81□□□□□ -0.36
THBS3-202ENST00000428962 FCRL6Q6DN72 434 aa12.81□□□□□ -0.36
THBS3-202ENST00000428962 RASSF6Q6ZTQ3 369 aa12.81□□□□□ -0.36
THBS3-202ENST00000428962 NANOGP1Q8N7R0 232 aa12.81□□□□□ -0.36
THBS3-202ENST00000428962 TMEM163Q8TC26 289 aa12.81□□□□□ -0.36
THBS3-202ENST00000428962 ACOT11Q8WXI4 607 aaPredicted RBP12.81□□□□□ -0.36
THBS3-202ENST00000428962 LRR1Q96L50 414 aa12.81□□□□□ -0.36
THBS3-202ENST00000428962 MTHFD2LQ9H903 347 aaPredicted RBP12.81□□□□□ -0.36
THBS3-202ENST00000428962 CTPS2Q9NRF8 586 aa12.81□□□□□ -0.36
THBS3-202ENST00000428962 CLDND1Q9NY35 253 aa12.81□□□□□ -0.36
THBS3-202ENST00000428962 ZNF443Q9Y2A4 671 aaPredicted RBP12.81□□□□□ -0.36
THBS3-202ENST00000428962 WDR45Q9Y484 360 aa12.81□□□□□ -0.36
THBS3-202ENST00000428962 KIR2DS5A0A0G2JLQ3 304 aa12.81□□□□□ -0.36
THBS3-202ENST00000428962 A0A0G2JNG1 304 aa12.81□□□□□ -0.36
THBS3-202ENST00000428962 PNMA8CA0A1B0GUJ8 204 aa12.81□□□□□ -0.36
THBS3-202ENST00000428962 OR5K4A6NMS3 321 aa12.81□□□□□ -0.36
THBS3-202ENST00000428962 KIR2DS3K7RE56 304 aa12.81□□□□□ -0.36
THBS3-202ENST00000428962 DSCR3O14972 297 aa12.81□□□□□ -0.36
THBS3-202ENST00000428962 UBXN7O94888 489 aa12.81□□□□□ -0.36
THBS3-202ENST00000428962 SEMA4FO95754 770 aa12.81□□□□□ -0.36
THBS3-202ENST00000428962 ADRA2AP08913 450 aa12.81□□□□□ -0.36
THBS3-202ENST00000428962 IFI6P09912 130 aa12.81□□□□□ -0.36
THBS3-202ENST00000428962 IMPDH2P12268 514 aa12.81□□□□□ -0.36
THBS3-202ENST00000428962 CPMP14384 443 aa12.81□□□□□ -0.36
THBS3-202ENST00000428962 PORP16435 677 aaPredicted RBP12.81□□□□□ -0.36
THBS3-202ENST00000428962 ALOX12P18054 663 aa12.81□□□□□ -0.36
THBS3-202ENST00000428962 MYL12AP19105 171 aa12.81□□□□□ -0.36
THBS3-202ENST00000428962 PSMA1P25786 263 aaKnown RBP12.81□□□□□ -0.36
THBS3-202ENST00000428962 AVPR1BP47901 424 aa12.81□□□□□ -0.36
THBS3-202ENST00000428962 MLLT11Q13015 90 aaPredicted RBP12.81□□□□□ -0.36
THBS3-202ENST00000428962 RUNX2Q13950 521 aa12.81□□□□□ -0.36
THBS3-202ENST00000428962 KIR2DS5Q14953 304 aa12.81□□□□□ -0.36
THBS3-202ENST00000428962 SSX1Q16384 188 aa12.81□□□□□ -0.36
THBS3-202ENST00000428962 SNAPC1Q16533 368 aa12.81□□□□□ -0.36
THBS3-202ENST00000428962 ZNF181Q2M3W8 571 aa12.81□□□□□ -0.36
THBS3-202ENST00000428962 FRRS1Q6ZNA5 592 aa12.81□□□□□ -0.36
THBS3-202ENST00000428962 PLEKHG7Q6ZR37 379 aa12.81□□□□□ -0.36
THBS3-202ENST00000428962 Q6ZSR6 202 aa12.81□□□□□ -0.36
THBS3-202ENST00000428962 MRGPREQ86SM8 312 aa12.81□□□□□ -0.36
THBS3-202ENST00000428962 SLC9A6Q92581 669 aa12.81□□□□□ -0.36
THBS3-202ENST00000428962 CDS1Q92903 461 aa12.81□□□□□ -0.36
THBS3-202ENST00000428962 SLC6A18Q96N87 628 aa12.81□□□□□ -0.36
THBS3-202ENST00000428962 ZNF582Q96NG8 517 aaPredicted RBP12.81□□□□□ -0.36
THBS3-202ENST00000428962 CDADC1Q9BWV3 514 aa12.81□□□□□ -0.36
THBS3-202ENST00000428962 POLR2J2Q9GZM3 115 aaKnown RBP12.81□□□□□ -0.36
THBS3-202ENST00000428962 ANKRA2Q9H9E1 313 aa12.81□□□□□ -0.36
THBS3-202ENST00000428962 SIAEQ9HAT2 523 aa12.81□□□□□ -0.36
THBS3-202ENST00000428962 CD93Q9NPY3 652 aa12.81□□□□□ -0.36
THBS3-202ENST00000428962 CRNNQ9UBG3 495 aaPredicted RBP12.81□□□□□ -0.36
THBS3-202ENST00000428962 MYO9BQ13459 2157 aa12.8□□□□□ -0.36
THBS3-202ENST00000428962 A0A0J9YY10 115 aa12.8□□□□□ -0.36
THBS3-202ENST00000428962 PRAMEF26H0Y7S4 382 aa12.8□□□□□ -0.36
THBS3-202ENST00000428962 PRODHO43272 600 aa12.8□□□□□ -0.36
THBS3-202ENST00000428962 UPK1BO75841 260 aa12.8□□□□□ -0.36
THBS3-202ENST00000428962 MED26O95402 600 aa12.8□□□□□ -0.36
THBS3-202ENST00000428962 THBS1P07996 1170 aa12.8□□□□□ -0.36
THBS3-202ENST00000428962 FPR3P25089 353 aa12.8□□□□□ -0.36
THBS3-202ENST00000428962 STAT5AP42229 794 aa12.8□□□□□ -0.36
THBS3-202ENST00000428962 SIM1P81133 766 aaPredicted RBP12.8□□□□□ -0.36
THBS3-202ENST00000428962 PUS10Q3MIT2 529 aaKnown RBP12.8□□□□□ -0.36
THBS3-202ENST00000428962 C3orf38Q5JPI3 329 aa12.8□□□□□ -0.36
THBS3-202ENST00000428962 TMEM92Q6UXU6 159 aa12.8□□□□□ -0.36
THBS3-202ENST00000428962 RNF44Q7L0R7 432 aa12.8□□□□□ -0.36
THBS3-202ENST00000428962 RBM12BQ8IXT5 1001 aaKnown RBP12.8□□□□□ -0.36
THBS3-202ENST00000428962 SLC16A11Q8NCK7 471 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms