RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 OSER1Q9NX31 292 aa4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 LCMT1Q9UIC8 334 aa4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 GGA2Q9UJY4 613 aa4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 ZNF148Q9UQR1 794 aa4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 ANGPTL3Q9Y5C1 460 aa4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 CSNK1G3Q9Y6M4 447 aa4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 MED13Q9UHV7 2174 aa4.09□□□□□ -1.76
HMGB3P5-201ENST00000428894 CELSR2Q9HCU4 2923 aa4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 EDDM13A0A1B0GTR0 161 aa4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 PGPEP1LA6NFU8 196 aa4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 C10orf142B7Z368 130 aa4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 KLHL41O60662 606 aa4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 POLQO75417 2590 aa4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 BEST1O76090 585 aa4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 UBE4BO95155 1302 aa4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 NXPH2O95156 264 aa4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 PAHP00439 452 aa4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 IL1BP01584 269 aa4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 DLATP10515 647 aaKnown RBP4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 GATA2P23769 480 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 FBN2P35556 2912 aa4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 LONP1P36776 959 aaKnown RBP4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 HADHAP40939 763 aa4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 CETN2P41208 172 aa4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 GARSP41250 739 aaKnown RBP4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 PGFP49763 221 aa4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 PDX1P52945 283 aa4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 HERV-K104P61576 105 aa4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 SNRPFP62306 86 aaKnown RBP4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 CBX3Q13185 183 aa4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 ESPL1Q14674 2120 aa4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 PSMD6Q15008 389 aa4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 ZFHX3Q15911 3703 aa4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 IGFBP7Q16270 282 aa4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 CCDC14Q49A88 953 aa4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 C9orf64Q5T6V5 341 aa4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 CFAP161Q6P656 301 aa4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 CENPQQ7L2Z9 268 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 EFL1Q7Z2Z2 1120 aaKnown RBP4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 PTAR1Q7Z6K3 402 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 ACOT1Q86TX2 421 aa4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 TRIM69Q86WT6 500 aa4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 HOGA1Q86XE5 327 aa4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 LACC1Q8IV20 430 aa4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 UNC45BQ8IWX7 931 aa4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 NIPA2Q8N8Q9 360 aa4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 AMER3Q8N944 861 aa4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 SPERTQ8NA61 448 aa4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 BBOF1Q8ND07 529 aa4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 OR5M8Q8NGP6 311 aa4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 OR2AJ1Q8NGZ0 328 aa4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 FIBINQ8TAL6 211 aa4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 MGARPQ8TDB4 240 aa4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 SLC2A14Q8TDB8 520 aa4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 NAT6Q93015 286 aa4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 SNX21Q969T3 373 aa4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 SPDL1Q96EA4 605 aa4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 RBM14Q96PK6 669 aaKnown RBP4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 IL12RB2Q99665 862 aa4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 CCT7Q99832 543 aa4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 DDX50Q9BQ39 737 aaKnown RBP4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 PIGQQ9BRB3 760 aa4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 CBWD1Q9BRT8 395 aa4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 TRPM6Q9BX84 2022 aa4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 PARD6BQ9BYG5 372 aa4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 DRC3Q9H069 523 aa4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 DPAGT1Q9H3H5 408 aa4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 NMUR1Q9HB89 426 aa4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 BLOC1S4Q9NUP1 217 aa4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 CYTH4Q9UIA0 394 aa4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 CLEC4EQ9ULY5 219 aa4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 NME7Q9Y5B8 376 aa4.08□□□□□ -1.76
HMGB3P5-201ENST00000428894 ZFC3H1O60293 1989 aaKnown RBP4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 LRBAP50851 2863 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 ITPR3Q14573 2671 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 VPS37CA5D8V6 355 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 RTCAO00442 366 aaKnown RBP4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 RTN2O75298 545 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 CREG1O75629 220 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 KRT14P02533 472 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 GIMD1P0DJR0 217 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 ACADSP16219 412 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 HNRNPA2B1P22626 353 aaKnown RBP4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 MAT2AP31153 395 aaKnown RBP4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 SLC6A6P31641 620 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 AKT2P31751 481 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 UGT1A5P35504 534 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 HNF4AP41235 474 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 MFAP4P55083 255 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 GSDMDP57764 484 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 MYL6P60660 151 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 KRT83P78385 493 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 SULT2A1Q06520 285 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 ELAVL3Q14576 367 aaKnown RBP4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 IRF3Q14653 427 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 SNCBQ16143 134 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 SNRNP35Q16560 246 aaKnown RBP4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 CDKN3Q16667 212 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 ZNF699Q32M78 642 aa4.07□□□□□ -1.76
HMGB3P5-201ENST00000428894 KRTAP21-3Q3LHN1 58 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms