RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 ZFP1Q6P2D0 407 aa8.23□□□□□ -1.09
SMC6-204ENST00000428868 PAPD4Q6PIY7 484 aaKnown RBP8.23□□□□□ -1.09
SMC6-204ENST00000428868 C6orf15Q6UXA7 325 aaPredicted RBP8.23□□□□□ -1.09
SMC6-204ENST00000428868 C16orf47Q6ZP98 133 aaPredicted RBP8.23□□□□□ -1.09
SMC6-204ENST00000428868 LRRC74BQ6ZQY2 392 aa8.23□□□□□ -1.09
SMC6-204ENST00000428868 C16orf62Q7Z3J2 963 aa8.23□□□□□ -1.09
SMC6-204ENST00000428868 TMEM179BQ7Z7N9 219 aa8.23□□□□□ -1.09
SMC6-204ENST00000428868 VRK2Q86Y07 508 aa8.23□□□□□ -1.09
SMC6-204ENST00000428868 RBM45Q8IUH3 476 aaKnown RBP8.23□□□□□ -1.09
SMC6-204ENST00000428868 EPHX4Q8IUS5 362 aa8.23□□□□□ -1.09
SMC6-204ENST00000428868 PRR22Q8IZ63 422 aa8.23□□□□□ -1.09
SMC6-204ENST00000428868 COX18Q8N8Q8 333 aa8.23□□□□□ -1.09
SMC6-204ENST00000428868 CHDHQ8NE62 594 aaPredicted RBP8.23□□□□□ -1.09
SMC6-204ENST00000428868 OR14A16Q8NHC5 309 aa8.23□□□□□ -1.09
SMC6-204ENST00000428868 BBS10Q8TAM1 723 aa8.23□□□□□ -1.09
SMC6-204ENST00000428868 APOBEC4Q8WW27 367 aaKnown RBP8.23□□□□□ -1.09
SMC6-204ENST00000428868 ARSGQ96EG1 525 aa8.23□□□□□ -1.09
SMC6-204ENST00000428868 RMND5BQ96G75 393 aaPredicted RBP8.23□□□□□ -1.09
SMC6-204ENST00000428868 COL21A1Q96P44 957 aa8.23□□□□□ -1.09
SMC6-204ENST00000428868 STACQ99469 402 aa8.23□□□□□ -1.09
SMC6-204ENST00000428868 SDF2Q99470 211 aa8.23□□□□□ -1.09
SMC6-204ENST00000428868 CHID1Q9BWS9 393 aa8.23□□□□□ -1.09
SMC6-204ENST00000428868 NXF5Q9H1B4 397 aaKnown RBP8.23□□□□□ -1.09
SMC6-204ENST00000428868 WDR54Q9H977 334 aa8.23□□□□□ -1.09
SMC6-204ENST00000428868 LIN28AQ9H9Z2 209 aaKnown RBP8.23□□□□□ -1.09
SMC6-204ENST00000428868 AGPAT4Q9NRZ5 378 aa8.23□□□□□ -1.09
SMC6-204ENST00000428868 FLRT3Q9NZU0 649 aa8.23□□□□□ -1.09
SMC6-204ENST00000428868 GPN3Q9UHW5 284 aaPredicted RBP8.23□□□□□ -1.09
SMC6-204ENST00000428868 ANGPTL2Q9UKU9 493 aa8.23□□□□□ -1.09
SMC6-204ENST00000428868 PCDHGA8Q9Y5G5 932 aa8.23□□□□□ -1.09
SMC6-204ENST00000428868 MRPS18BQ9Y676 258 aaKnown RBP8.23□□□□□ -1.09
SMC6-204ENST00000428868 CLCA3PQ9Y6N3 262 aa8.23□□□□□ -1.09
SMC6-204ENST00000428868 NCOR2Q9Y618 2525 aa8.23□□□□□ -1.09
SMC6-204ENST00000428868 KIAA1549Q9HCM3 1950 aa8.22□□□□□ -1.09
SMC6-204ENST00000428868 LOC101059948A0A1B0GTJ6 334 aa8.22□□□□□ -1.09
SMC6-204ENST00000428868 CDC14CA4D256 554 aa8.22□□□□□ -1.09
SMC6-204ENST00000428868 SAC3D1A6NKF1 404 aa8.22□□□□□ -1.09
SMC6-204ENST00000428868 CLDN24A6NM45 220 aa8.22□□□□□ -1.09
SMC6-204ENST00000428868 C9J4A7 227 aa8.22□□□□□ -1.09
SMC6-204ENST00000428868 J3KTA2 159 aa8.22□□□□□ -1.09
SMC6-204ENST00000428868 PEX12O00623 359 aa8.22□□□□□ -1.09
SMC6-204ENST00000428868 SOCS6O14544 535 aa8.22□□□□□ -1.09
SMC6-204ENST00000428868 TERTO14746 1132 aaKnown RBP8.22□□□□□ -1.09
SMC6-204ENST00000428868 SUV39H1O43463 412 aa8.22□□□□□ -1.09
SMC6-204ENST00000428868 FRS3O43559 492 aa8.22□□□□□ -1.09
SMC6-204ENST00000428868 ZNF354AO60765 605 aaPredicted RBP8.22□□□□□ -1.09
SMC6-204ENST00000428868 SEMA7AO75326 666 aa8.22□□□□□ -1.09
SMC6-204ENST00000428868 KCNK2O95069 426 aa8.22□□□□□ -1.09
SMC6-204ENST00000428868 RAP2AP10114 183 aa8.22□□□□□ -1.09
SMC6-204ENST00000428868 UMPSP11172 480 aa8.22□□□□□ -1.09
SMC6-204ENST00000428868 CEACAM1P13688 526 aa8.22□□□□□ -1.09
SMC6-204ENST00000428868 MAGEA2P43356 314 aa8.22□□□□□ -1.09
SMC6-204ENST00000428868 MAGEA8P43361 318 aa8.22□□□□□ -1.09
SMC6-204ENST00000428868 RFX3P48380 749 aa8.22□□□□□ -1.09
SMC6-204ENST00000428868 PTDSS1P48651 473 aaKnown RBP8.22□□□□□ -1.09
SMC6-204ENST00000428868 ST13P50502 369 aaKnown RBP8.22□□□□□ -1.09
SMC6-204ENST00000428868 IST1P53990 364 aa8.22□□□□□ -1.09
SMC6-204ENST00000428868 CRISP3P54108 245 aa8.22□□□□□ -1.09
SMC6-204ENST00000428868 SELENOWP63302 87 aa8.22□□□□□ -1.09
SMC6-204ENST00000428868 POU6F2P78424 691 aaPredicted RBP8.22□□□□□ -1.09
SMC6-204ENST00000428868 CHRNB3Q05901 458 aa8.22□□□□□ -1.09
SMC6-204ENST00000428868 EIF3IQ13347 325 aaKnown RBP8.22□□□□□ -1.09
SMC6-204ENST00000428868 EBPQ15125 230 aaKnown RBP8.22□□□□□ -1.09
SMC6-204ENST00000428868 GPR68Q15743 365 aa8.22□□□□□ -1.09
SMC6-204ENST00000428868 LRRC36Q1X8D7 754 aa8.22□□□□□ -1.09
SMC6-204ENST00000428868 ATAD3BQ5T9A4 648 aa8.22□□□□□ -1.09
SMC6-204ENST00000428868 INTS11Q5TA45 600 aaKnown RBP8.22□□□□□ -1.09
SMC6-204ENST00000428868 IRAK1BP1Q5VVH5 260 aa8.22□□□□□ -1.09
SMC6-204ENST00000428868 ANKRD34AQ69YU3 496 aa8.22□□□□□ -1.09
SMC6-204ENST00000428868 ZCCHC12Q6PEW1 402 aa8.22□□□□□ -1.09
SMC6-204ENST00000428868 CPEB2Q7Z5Q1 589 aaKnown RBP8.22□□□□□ -1.09
SMC6-204ENST00000428868 PATL1Q86TB9 770 aaKnown RBP8.22□□□□□ -1.09
SMC6-204ENST00000428868 TSPYL5Q86VY4 417 aaPredicted RBP8.22□□□□□ -1.09
SMC6-204ENST00000428868 SLC30A8Q8IWU4 369 aa8.22□□□□□ -1.09
SMC6-204ENST00000428868 EID3Q8N140 333 aa8.22□□□□□ -1.09
SMC6-204ENST00000428868 GOLM1Q8NBJ4 401 aa8.22□□□□□ -1.09
SMC6-204ENST00000428868 APCDD1LQ8NCL9 501 aa8.22□□□□□ -1.09
SMC6-204ENST00000428868 OR7G1Q8NGA0 311 aa8.22□□□□□ -1.09
SMC6-204ENST00000428868 OR1N1Q8NGS0 311 aa8.22□□□□□ -1.09
SMC6-204ENST00000428868 OR2Y1Q8NGV0 311 aa8.22□□□□□ -1.09
SMC6-204ENST00000428868 ADIPOR1Q96A54 375 aa8.22□□□□□ -1.09
SMC6-204ENST00000428868 C7orf34Q96L11 122 aa8.22□□□□□ -1.09
SMC6-204ENST00000428868 TRNT1Q96Q11 434 aaKnown RBP8.22□□□□□ -1.09
SMC6-204ENST00000428868 GAL3ST4Q96RP7 486 aa8.22□□□□□ -1.09
SMC6-204ENST00000428868 TACO1Q9BSH4 297 aaKnown RBP8.22□□□□□ -1.09
SMC6-204ENST00000428868 BTBD2Q9BX70 525 aa8.22□□□□□ -1.09
SMC6-204ENST00000428868 UGT2B28Q9BY64 529 aa8.22□□□□□ -1.09
SMC6-204ENST00000428868 ZNF350Q9GZX5 532 aa8.22□□□□□ -1.09
SMC6-204ENST00000428868 NTN4Q9HB63 628 aa8.22□□□□□ -1.09
SMC6-204ENST00000428868 BCL2L10Q9HD36 194 aa8.22□□□□□ -1.09
SMC6-204ENST00000428868 DUSP22Q9NRW4 184 aa8.22□□□□□ -1.09
SMC6-204ENST00000428868 RPS6KA6Q9UK32 745 aa8.22□□□□□ -1.09
SMC6-204ENST00000428868 SAMD4AQ9UPU9 718 aaKnown RBP8.22□□□□□ -1.09
SMC6-204ENST00000428868 GPR55Q9Y2T6 319 aaPredicted RBP8.22□□□□□ -1.09
SMC6-204ENST00000428868 HS3ST3B1Q9Y662 390 aa8.22□□□□□ -1.09
SMC6-204ENST00000428868 TNRC6AQ8NDV7 1962 aaKnown RBP8.22□□□□□ -1.09
SMC6-204ENST00000428868 ZFHX4Q86UP3 3567 aa8.21□□□□□ -1.09
SMC6-204ENST00000428868 A0A0G2JPF8 293 aa8.21□□□□□ -1.1
SMC6-204ENST00000428868 DCDC2BA2VCK2 349 aa8.21□□□□□ -1.1
SMC6-204ENST00000428868 TMEM200CA6NKL6 621 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms