RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 COLEC12Q5KU26 742 aa8.83□□□□□ -1
HMGCLL1-206ENST00000428842 ANKRD34AQ69YU3 496 aa8.83□□□□□ -1
HMGCLL1-206ENST00000428842 OR5M10Q6IEU7 315 aa8.83□□□□□ -1
HMGCLL1-206ENST00000428842 CDC73Q6P1J9 531 aa8.83□□□□□ -1
HMGCLL1-206ENST00000428842 SIRT6Q8N6T7 355 aa8.83□□□□□ -1
HMGCLL1-206ENST00000428842 ZNF614Q8N883 585 aa8.83□□□□□ -1
HMGCLL1-206ENST00000428842 TSPEARQ8WU66 669 aa8.83□□□□□ -1
HMGCLL1-206ENST00000428842 SLCO4A1Q96BD0 722 aa8.83□□□□□ -1
HMGCLL1-206ENST00000428842 ASPSCR1Q9BZE9 553 aa8.83□□□□□ -1
HMGCLL1-206ENST00000428842 GPN3Q9UHW5 284 aaPredicted RBP8.83□□□□□ -1
HMGCLL1-206ENST00000428842 TNRC6AQ8NDV7 1962 aaKnown RBP8.83□□□□□ -1
HMGCLL1-206ENST00000428842 MPDZO75970 2070 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 IGLV3-12A0A075B6K2 115 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 ELOVL7A1L3X0 281 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 G3V3Y1 287 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 EMC8O43402 210 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 SLC28A2O43868 658 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 CCNYL3P0C7X3 344 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 CT45A8P0DMV1 189 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 CT45A9P0DMV2 189 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 DDX5P17844 614 aaKnown RBP8.82□□□□□ -1
HMGCLL1-206ENST00000428842 TCEA1P23193 301 aaKnown RBP8.82□□□□□ -1
HMGCLL1-206ENST00000428842 SH3BGRP55822 239 aaPredicted RBP8.82□□□□□ -1
HMGCLL1-206ENST00000428842 DSTNP60981 165 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 INPP5JQ15735 1006 aaPredicted RBP8.82□□□□□ -1
HMGCLL1-206ENST00000428842 BTBD16Q32M84 506 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 CT45A2Q5DJT8 189 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 SAMD4BQ5PRF9 694 aaKnown RBP8.82□□□□□ -1
HMGCLL1-206ENST00000428842 TMPRSS7Q7RTY8 843 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 TSPYL5Q86VY4 417 aaPredicted RBP8.82□□□□□ -1
HMGCLL1-206ENST00000428842 TMPRSS12Q86WS5 348 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 CALHM3Q86XJ0 350 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 VRK2Q86Y07 508 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 ZNF615Q8N8J6 731 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 OR11G2Q8NGC1 345 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 OR8J3Q8NGG0 315 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 PHF12Q96QT6 1004 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 OR1F2PQ96R84 312 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 RHCGQ9UBD6 479 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 GPR55Q9Y2T6 319 aaPredicted RBP8.82□□□□□ -1
HMGCLL1-206ENST00000428842 MAGED1Q9Y5V3 778 aaPredicted RBP8.82□□□□□ -1
HMGCLL1-206ENST00000428842 ZNF407Q9C0G0 2248 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 TMEM200CA6NKL6 621 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 A8MVJ9 347 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 hCG_2039718K7EN88 272 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 M0QX08 132 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 CXCR6O00574 342 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 GSTA4O15217 222 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 RAD1O60671 282 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 TPST2O60704 377 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 TIPRLO75663 272 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 PRKD3O94806 890 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 OR6B1O95007 311 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 PGM3O95394 542 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 CLPTM1O96005 669 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 TFPTP0C1Z6 253 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 LIFP15018 202 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 RPL3P39023 403 aaKnown RBP8.82□□□□□ -1
HMGCLL1-206ENST00000428842 NR0B1P51843 470 aaKnown RBP8.82□□□□□ -1
HMGCLL1-206ENST00000428842 ARFIP1P53367 373 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 LSM11P83369 360 aaKnown RBP eCLIP8.82□□□□□ -1
HMGCLL1-206ENST00000428842 ATP1A4Q13733 1029 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 SCARB2Q14108 478 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 VMACQ2NL98 169 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 COQ5Q5HYK3 327 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 TMEM164Q5U3C3 297 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 AP1ARQ63HQ0 302 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 CPZQ66K79 652 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 QSOX2Q6ZRP7 698 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 AMIGO2Q86SJ2 522 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 MEX3DQ86XN8 651 aaKnown RBP8.82□□□□□ -1
HMGCLL1-206ENST00000428842 LACC1Q8IV20 430 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 CHERPQ8IWX8 916 aaKnown RBP8.82□□□□□ -1
HMGCLL1-206ENST00000428842 MICU2Q8IYU8 434 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 NLGN4XQ8N0W4 816 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 METTL25Q8N6Q8 603 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 NLGN4YQ8NFZ3 816 aaPredicted RBP8.82□□□□□ -1
HMGCLL1-206ENST00000428842 OR52N2Q8NGI0 321 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 TAMM41Q96BW9 452 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 ZNF524Q96C55 264 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 DGCR14Q96DF8 476 aaKnown RBP8.82□□□□□ -1
HMGCLL1-206ENST00000428842 ZNF597Q96LX8 424 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 TREX2Q9BQ50 279 aaPredicted RBP8.82□□□□□ -1
HMGCLL1-206ENST00000428842 RBM38Q9H0Z9 239 aaKnown RBP8.82□□□□□ -1
HMGCLL1-206ENST00000428842 FOLH1BQ9HBA9 442 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 NEUROD4Q9HD90 331 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 C19orf53Q9UNZ5 99 aaPredicted RBP8.82□□□□□ -1
HMGCLL1-206ENST00000428842 SH3GLB1Q9Y371 365 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 AP4S1Q9Y587 144 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 HRH3Q9Y5N1 445 aa8.82□□□□□ -1
HMGCLL1-206ENST00000428842 HEMK1Q9Y5R4 338 aaPredicted RBP8.82□□□□□ -1
HMGCLL1-206ENST00000428842 DNAJC13O75165 2243 aa8.81□□□□□ -1
HMGCLL1-206ENST00000428842 STMND1H3BQB6 276 aa8.81□□□□□ -1
HMGCLL1-206ENST00000428842 J3KTA2 159 aa8.81□□□□□ -1
HMGCLL1-206ENST00000428842 EFSO43281 561 aa8.81□□□□□ -1
HMGCLL1-206ENST00000428842 TBX19O60806 448 aa8.81□□□□□ -1
HMGCLL1-206ENST00000428842 ADAM11O75078 769 aa8.81□□□□□ -1
HMGCLL1-206ENST00000428842 CREG1O75629 220 aa8.81□□□□□ -1
HMGCLL1-206ENST00000428842 NR2F1P10589 423 aa8.81□□□□□ -1
HMGCLL1-206ENST00000428842 SLC7A1P30825 629 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms