RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 HAO1Q9UJM8 370 aa12.46□□□□□ -0.41
SNX3-204ENST00000426155 MAPRE3Q9UPY8 281 aa12.46□□□□□ -0.41
SNX3-204ENST00000426155 OR10H1Q9Y4A9 318 aa12.46□□□□□ -0.41
SNX3-204ENST00000426155 CENPEQ02224 2701 aa12.46□□□□□ -0.41
SNX3-204ENST00000426155 UNC79Q9P2D8 2635 aa12.46□□□□□ -0.42
SNX3-204ENST00000426155 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.45□□□□□ -0.42
SNX3-204ENST00000426155 TRGV5A0A0B4J1U4 118 aa12.45□□□□□ -0.42
SNX3-204ENST00000426155 GXYLT2A0PJZ3 443 aa12.45□□□□□ -0.42
SNX3-204ENST00000426155 OR6C70A6NIJ9 312 aa12.45□□□□□ -0.42
SNX3-204ENST00000426155 B4DXG7 233 aa12.45□□□□□ -0.42
SNX3-204ENST00000426155 ICOSLGO75144 302 aa12.45□□□□□ -0.42
SNX3-204ENST00000426155 SLITRK5O94991 958 aa12.45□□□□□ -0.42
SNX3-204ENST00000426155 PRPS2P11908 318 aa12.45□□□□□ -0.42
SNX3-204ENST00000426155 CYP4B1P13584 511 aa12.45□□□□□ -0.42
SNX3-204ENST00000426155 NAGAP17050 411 aa12.45□□□□□ -0.42
SNX3-204ENST00000426155 PTPN6P29350 595 aa12.45□□□□□ -0.42
SNX3-204ENST00000426155 IL12BP29460 328 aa12.45□□□□□ -0.42
SNX3-204ENST00000426155 RFX3P48380 749 aa12.45□□□□□ -0.42
SNX3-204ENST00000426155 DIO3P55073 304 aa12.45□□□□□ -0.42
SNX3-204ENST00000426155 MANFP55145 182 aaKnown RBP12.45□□□□□ -0.42
SNX3-204ENST00000426155 GAB1Q13480 694 aa12.45□□□□□ -0.42
SNX3-204ENST00000426155 TTMPQ5BVD1 217 aa12.45□□□□□ -0.42
SNX3-204ENST00000426155 ZNF787Q6DD87 383 aa12.45□□□□□ -0.42
SNX3-204ENST00000426155 PAOXQ6QHF9 649 aa12.45□□□□□ -0.42
SNX3-204ENST00000426155 GALNT10Q86SR1 603 aa12.45□□□□□ -0.42
SNX3-204ENST00000426155 ZFP28Q8NHY6 868 aa12.45□□□□□ -0.42
SNX3-204ENST00000426155 PIK3R3Q92569 461 aa12.45□□□□□ -0.42
SNX3-204ENST00000426155 MTERF3Q96E29 417 aa12.45□□□□□ -0.42
SNX3-204ENST00000426155 GIMAP5Q96F15 307 aa12.45□□□□□ -0.42
SNX3-204ENST00000426155 ZBED6CLQ96FA7 236 aaPredicted RBP12.45□□□□□ -0.42
SNX3-204ENST00000426155 TMEM41AQ96HV5 264 aa12.45□□□□□ -0.42
SNX3-204ENST00000426155 DMRTA2Q96SC8 542 aa12.45□□□□□ -0.42
SNX3-204ENST00000426155 UBQLN3Q9H347 655 aa12.45□□□□□ -0.42
SNX3-204ENST00000426155 RYDENQ9NUL5 291 aaKnown RBP12.45□□□□□ -0.42
SNX3-204ENST00000426155 B4GALT7Q9UBV7 327 aa12.45□□□□□ -0.42
SNX3-204ENST00000426155 C15orf41Q9Y2V0 281 aa12.45□□□□□ -0.42
SNX3-204ENST00000426155 A0A1B0GVC2 190 aa12.44□□□□□ -0.42
SNX3-204ENST00000426155 AQP7O14520 342 aa12.44□□□□□ -0.42
SNX3-204ENST00000426155 SNNO75324 88 aaPredicted RBP12.44□□□□□ -0.42
SNX3-204ENST00000426155 TRAPPC6AO75865 159 aa12.44□□□□□ -0.42
SNX3-204ENST00000426155 SNX4O95219 450 aa12.44□□□□□ -0.42
SNX3-204ENST00000426155 IGKV1D-16P01601 117 aa12.44□□□□□ -0.42
SNX3-204ENST00000426155 KITP10721 976 aa12.44□□□□□ -0.42
SNX3-204ENST00000426155 ACP2P11117 423 aa12.44□□□□□ -0.42
SNX3-204ENST00000426155 GRNP28799 593 aaKnown RBP12.44□□□□□ -0.42
SNX3-204ENST00000426155 KRT20P35900 424 aa12.44□□□□□ -0.42
SNX3-204ENST00000426155 RPP38P78345 283 aaKnown RBP12.44□□□□□ -0.42
SNX3-204ENST00000426155 EMX2Q04743 252 aa12.44□□□□□ -0.42
SNX3-204ENST00000426155 GXYLT1Q4G148 440 aa12.44□□□□□ -0.42
SNX3-204ENST00000426155 EIPR1Q53HC9 387 aa12.44□□□□□ -0.42
SNX3-204ENST00000426155 OR5M10Q6IEU7 315 aa12.44□□□□□ -0.42
SNX3-204ENST00000426155 ZNF585AQ6P3V2 769 aa12.44□□□□□ -0.42
SNX3-204ENST00000426155 R3HCC1LQ7Z5L2 792 aaKnown RBP12.44□□□□□ -0.42
SNX3-204ENST00000426155 PACS2Q86VP3 889 aa12.44□□□□□ -0.42
SNX3-204ENST00000426155 RIMKLAQ8IXN7 391 aa12.44□□□□□ -0.42
SNX3-204ENST00000426155 WDSUB1Q8N9V3 476 aa12.44□□□□□ -0.42
SNX3-204ENST00000426155 NUP43Q8NFH3 380 aa12.44□□□□□ -0.42
SNX3-204ENST00000426155 C16orf58Q96GQ5 468 aa12.44□□□□□ -0.42
SNX3-204ENST00000426155 YIPF4Q9BSR8 244 aa12.44□□□□□ -0.42
SNX3-204ENST00000426155 LMF2Q9BU23 707 aaKnown RBP12.44□□□□□ -0.42
SNX3-204ENST00000426155 SERHLQ9NQF3 203 aa12.44□□□□□ -0.42
SNX3-204ENST00000426155 ACSS1Q9NUB1 689 aaPredicted RBP12.44□□□□□ -0.42
SNX3-204ENST00000426155 FAM53CQ9NYF3 392 aa12.44□□□□□ -0.42
SNX3-204ENST00000426155 NKIRAS1Q9NYS0 192 aa12.44□□□□□ -0.42
SNX3-204ENST00000426155 NOP53Q9NZM5 478 aaKnown RBP12.44□□□□□ -0.42
SNX3-204ENST00000426155 CBLCQ9ULV8 474 aa12.44□□□□□ -0.42
SNX3-204ENST00000426155 EIF3LQ9Y262 564 aaKnown RBP12.44□□□□□ -0.42
SNX3-204ENST00000426155 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.44□□□□□ -0.42
SNX3-204ENST00000426155 SLC6A5Q9Y345 797 aa12.44□□□□□ -0.42
SNX3-204ENST00000426155 CELSR2Q9HCU4 2923 aa12.43□□□□□ -0.42
SNX3-204ENST00000426155 C15orf38-AP3S2A0A0A6YYH1 394 aa12.43□□□□□ -0.42
SNX3-204ENST00000426155 GOLGA8QA0A0J9YX86 632 aa12.43□□□□□ -0.42
SNX3-204ENST00000426155 A0A1W2PRB8 838 aa12.43□□□□□ -0.42
SNX3-204ENST00000426155 GOLGA8OA6NCC3 632 aa12.43□□□□□ -0.42
SNX3-204ENST00000426155 PRSS44E7EML9 344 aa12.43□□□□□ -0.42
SNX3-204ENST00000426155 E9PLN8 166 aa12.43□□□□□ -0.42
SNX3-204ENST00000426155 GOLGA8NF8WBI6 632 aa12.43□□□□□ -0.42
SNX3-204ENST00000426155 SCO2O43819 266 aa12.43□□□□□ -0.42
SNX3-204ENST00000426155 SUSD5O60279 629 aa12.43□□□□□ -0.42
SNX3-204ENST00000426155 C6orf47O95873 294 aa12.43□□□□□ -0.42
SNX3-204ENST00000426155 ALDOCP09972 364 aaKnown RBP12.43□□□□□ -0.42
SNX3-204ENST00000426155 TCEA1P23193 301 aaKnown RBP12.43□□□□□ -0.42
SNX3-204ENST00000426155 GABRA3P34903 492 aa12.43□□□□□ -0.42
SNX3-204ENST00000426155 PNLIPRP2P54317 469 aa12.43□□□□□ -0.42
SNX3-204ENST00000426155 TOMM20Q15388 145 aa12.43□□□□□ -0.42
SNX3-204ENST00000426155 WIPI1Q5MNZ9 446 aaPredicted RBP12.43□□□□□ -0.42
SNX3-204ENST00000426155 DCST1Q5T197 706 aa12.43□□□□□ -0.42
SNX3-204ENST00000426155 CPTPQ5TA50 214 aa12.43□□□□□ -0.42
SNX3-204ENST00000426155 AGBL2Q5U5Z8 902 aa12.43□□□□□ -0.42
SNX3-204ENST00000426155 TIGD3Q6B0B8 471 aa12.43□□□□□ -0.42
SNX3-204ENST00000426155 SLC30A6Q6NXT4 461 aa12.43□□□□□ -0.42
SNX3-204ENST00000426155 MTFR2Q6P444 385 aa12.43□□□□□ -0.42
SNX3-204ENST00000426155 TMEM81Q6P7N7 255 aa12.43□□□□□ -0.42
SNX3-204ENST00000426155 YRDCQ86U90 279 aaKnown RBP12.43□□□□□ -0.42
SNX3-204ENST00000426155 HOMEZQ8IX15 550 aa12.43□□□□□ -0.42
SNX3-204ENST00000426155 ZNF808Q8N4W9 903 aaPredicted RBP12.43□□□□□ -0.42
SNX3-204ENST00000426155 OR1J4Q8NGS1 313 aa12.43□□□□□ -0.42
SNX3-204ENST00000426155 NEIL3Q8TAT5 605 aa12.43□□□□□ -0.42
SNX3-204ENST00000426155 RNF138Q8WVD3 245 aa12.43□□□□□ -0.42
SNX3-204ENST00000426155 SLC9A6Q92581 669 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms