RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 ANP32DO95626 131 aa22.5■■□□□ 1.19
VEGFA-209ENST00000425836 SNRPB2P08579 225 aaKnown RBP22.5■■□□□ 1.19
VEGFA-209ENST00000425836 KRT16P08779 473 aa22.5■■□□□ 1.19
VEGFA-209ENST00000425836 GTDC1Q4AE62 458 aa22.5■■□□□ 1.19
VEGFA-209ENST00000425836 SLC22A10Q63ZE4 541 aa22.5■■□□□ 1.19
VEGFA-209ENST00000425836 NUP54Q7Z3B4 507 aa22.5■■□□□ 1.19
VEGFA-209ENST00000425836 SPPL2AQ8TCT8 520 aa22.5■■□□□ 1.19
VEGFA-209ENST00000425836 ADAMTS15Q8TE58 950 aa22.5■■□□□ 1.19
VEGFA-209ENST00000425836 RMND5BQ96G75 393 aaPredicted RBP22.5■■□□□ 1.19
VEGFA-209ENST00000425836 COL21A1Q96P44 957 aa22.5■■□□□ 1.19
VEGFA-209ENST00000425836 CCT8L2Q96SF2 557 aa22.5■■□□□ 1.19
VEGFA-209ENST00000425836 ADOQ96SZ5 270 aa22.5■■□□□ 1.19
VEGFA-209ENST00000425836 KLF13Q9Y2Y9 288 aaPredicted RBP22.5■■□□□ 1.19
VEGFA-209ENST00000425836 CNTRLQ7Z7A1 2325 aa22.5■■□□□ 1.19
VEGFA-209ENST00000425836 OR6C70A6NIJ9 312 aa22.5■■□□□ 1.19
VEGFA-209ENST00000425836 ADSLP30566 484 aaPredicted RBP22.5■■□□□ 1.19
VEGFA-209ENST00000425836 KRT20P35900 424 aa22.5■■□□□ 1.19
VEGFA-209ENST00000425836 CASP9P55211 416 aa22.5■■□□□ 1.19
VEGFA-209ENST00000425836 MRPS22P82650 360 aaKnown RBP22.5■■□□□ 1.19
VEGFA-209ENST00000425836 DECR1Q16698 335 aa22.5■■□□□ 1.19
VEGFA-209ENST00000425836 MTDHQ86UE4 582 aaKnown RBP22.5■■□□□ 1.19
VEGFA-209ENST00000425836 SULF2Q8IWU5 870 aa22.5■■□□□ 1.19
VEGFA-209ENST00000425836 OR5D16Q8NGK9 328 aa22.5■■□□□ 1.19
VEGFA-209ENST00000425836 MIPOL1Q8TD10 442 aa22.5■■□□□ 1.19
VEGFA-209ENST00000425836 ZFP90Q8TF47 636 aa22.5■■□□□ 1.19
VEGFA-209ENST00000425836 DIO2Q92813 273 aa22.5■■□□□ 1.19
VEGFA-209ENST00000425836 CDS1Q92903 461 aa22.5■■□□□ 1.19
VEGFA-209ENST00000425836 EFHD2Q96C19 240 aaPredicted RBP22.5■■□□□ 1.19
VEGFA-209ENST00000425836 OR7D2Q96RA2 312 aa22.5■■□□□ 1.19
VEGFA-209ENST00000425836 SECISBP2Q96T21 854 aaKnown RBP22.5■■□□□ 1.19
VEGFA-209ENST00000425836 SACM1LQ9NTJ5 587 aa22.5■■□□□ 1.19
VEGFA-209ENST00000425836 DEPPQ9NTK1 212 aa22.5■■□□□ 1.19
VEGFA-209ENST00000425836 SLAMF8Q9P0V8 285 aa22.5■■□□□ 1.19
VEGFA-209ENST00000425836 ARMCX1Q9P291 453 aa22.5■■□□□ 1.19
VEGFA-209ENST00000425836 CNOT11Q9UKZ1 510 aaKnown RBP22.5■■□□□ 1.19
VEGFA-209ENST00000425836 NDUFAF1Q9Y375 327 aa22.5■■□□□ 1.19
VEGFA-209ENST00000425836 PCDHB14Q9Y5E9 798 aa22.5■■□□□ 1.19
VEGFA-209ENST00000425836 KCNE3Q9Y6H6 103 aa22.5■■□□□ 1.19
VEGFA-209ENST00000425836 FAM208BQ5VWN6 2430 aa22.49■■□□□ 1.19
VEGFA-209ENST00000425836 A0A096LPI6 279 aa22.49■■□□□ 1.19
VEGFA-209ENST00000425836 TTLL8A6PVC2 850 aa22.49■■□□□ 1.19
VEGFA-209ENST00000425836 PEX1O43933 1283 aa22.49■■□□□ 1.19
VEGFA-209ENST00000425836 ABCB7O75027 752 aa22.49■■□□□ 1.19
VEGFA-209ENST00000425836 KCNH1O95259 989 aa22.49■■□□□ 1.19
VEGFA-209ENST00000425836 IGKV1D-16P01601 117 aa22.49■■□□□ 1.19
VEGFA-209ENST00000425836 P04436 131 aa22.49■■□□□ 1.19
VEGFA-209ENST00000425836 HOXB9P17482 250 aaPredicted RBP22.49■■□□□ 1.19
VEGFA-209ENST00000425836 IL12BP29460 328 aa22.49■■□□□ 1.19
VEGFA-209ENST00000425836 PNLIPRP2P54317 469 aa22.49■■□□□ 1.19
VEGFA-209ENST00000425836 GPR85P60893 370 aa22.49■■□□□ 1.19
VEGFA-209ENST00000425836 PNPLA5Q7Z6Z6 429 aaPredicted RBP22.49■■□□□ 1.19
VEGFA-209ENST00000425836 CISD2Q8N5K1 135 aaKnown RBP22.49■■□□□ 1.19
VEGFA-209ENST00000425836 COX18Q8N8Q8 333 aa22.49■■□□□ 1.19
VEGFA-209ENST00000425836 TAAR6Q96RI8 345 aa22.49■■□□□ 1.19
VEGFA-209ENST00000425836 CNIH4Q9P003 139 aa22.49■■□□□ 1.19
VEGFA-209ENST00000425836 LEF1Q9UJU2 399 aaPredicted RBP22.49■■□□□ 1.19
VEGFA-209ENST00000425836 G3V3Y1 287 aa22.48■■□□□ 1.19
VEGFA-209ENST00000425836 SOX30O94993 753 aa22.48■■□□□ 1.19
VEGFA-209ENST00000425836 KCNK2O95069 426 aa22.48■■□□□ 1.19
VEGFA-209ENST00000425836 RASAL1O95294 804 aa22.48■■□□□ 1.19
VEGFA-209ENST00000425836 IL33O95760 270 aa22.48■■□□□ 1.19
VEGFA-209ENST00000425836 CNR1P21554 472 aa22.48■■□□□ 1.19
VEGFA-209ENST00000425836 LRIF1Q5T3J3 769 aa22.48■■□□□ 1.19
VEGFA-209ENST00000425836 RETREG3Q86VR2 466 aa22.48■■□□□ 1.19
VEGFA-209ENST00000425836 RNF130Q86XS8 419 aa22.48■■□□□ 1.19
VEGFA-209ENST00000425836 FBXW8Q8N3Y1 598 aa22.48■■□□□ 1.19
VEGFA-209ENST00000425836 FAM110BQ8TC76 370 aa22.48■■□□□ 1.19
VEGFA-209ENST00000425836 NODALQ96S42 347 aa22.48■■□□□ 1.19
VEGFA-209ENST00000425836 BTBD2Q9BX70 525 aa22.48■■□□□ 1.19
VEGFA-209ENST00000425836 OR51I1Q9H343 314 aa22.48■■□□□ 1.19
VEGFA-209ENST00000425836 PROK2Q9HC23 129 aa22.48■■□□□ 1.19
VEGFA-209ENST00000425836 MRTO4Q9UKD2 239 aaKnown RBP22.48■■□□□ 1.19
VEGFA-209ENST00000425836 CAPN7Q9Y6W3 813 aa22.48■■□□□ 1.19
VEGFA-209ENST00000425836 A0A0G2JMM0 328 aa22.47■■□□□ 1.19
VEGFA-209ENST00000425836 A0A1W2PPB8 328 aa22.47■■□□□ 1.19
VEGFA-209ENST00000425836 A0A1W2PRS3 328 aa22.47■■□□□ 1.19
VEGFA-209ENST00000425836 KIR3DP1A8MWS1 328 aa22.47■■□□□ 1.19
VEGFA-209ENST00000425836 KLRC4-KLRK1H3BQV0 150 aa22.47■■□□□ 1.19
VEGFA-209ENST00000425836 ANGPT2O15123 496 aa22.47■■□□□ 1.19
VEGFA-209ENST00000425836 SLC22A2O15244 555 aa22.47■■□□□ 1.19
VEGFA-209ENST00000425836 PMP22Q01453 160 aa22.47■■□□□ 1.19
VEGFA-209ENST00000425836 EFR3AQ14156 821 aa22.47■■□□□ 1.19
VEGFA-209ENST00000425836 INAQ16352 499 aa22.47■■□□□ 1.19
VEGFA-209ENST00000425836 PRR30Q53SZ7 412 aaPredicted RBP22.47■■□□□ 1.19
VEGFA-209ENST00000425836 PRAMEF20Q5VT98 475 aa22.47■■□□□ 1.19
VEGFA-209ENST00000425836 BICRALQ6AI39 1079 aa22.47■■□□□ 1.19
VEGFA-209ENST00000425836 ANGPTL8Q6UXH0 198 aa22.47■■□□□ 1.19
VEGFA-209ENST00000425836 SNRNP40Q96DI7 357 aaKnown RBP22.47■■□□□ 1.19
VEGFA-209ENST00000425836 AURKBQ96GD4 344 aaPredicted RBP22.47■■□□□ 1.19
VEGFA-209ENST00000425836 TPT1P8Q9HAU6 139 aa22.47■■□□□ 1.19
VEGFA-209ENST00000425836 ANKRD33BA6NCL7 494 aa22.46■■□□□ 1.19
VEGFA-209ENST00000425836 DUXAA6NLW8 204 aa22.46■■□□□ 1.19
VEGFA-209ENST00000425836 KALRNO60229 2985 aa22.46■■□□□ 1.19
VEGFA-209ENST00000425836 KRT75O95678 551 aa22.46■■□□□ 1.19
VEGFA-209ENST00000425836 CYP4B1P13584 511 aa22.46■■□□□ 1.19
VEGFA-209ENST00000425836 RFX3P48380 749 aa22.46■■□□□ 1.19
VEGFA-209ENST00000425836 MEOX1P50221 254 aa22.46■■□□□ 1.19
VEGFA-209ENST00000425836 MLLT10P55197 1068 aa22.46■■□□□ 1.19
VEGFA-209ENST00000425836 RPP38P78345 283 aaKnown RBP22.46■■□□□ 1.19
VEGFA-209ENST00000425836 POU6F2P78424 691 aaPredicted RBP22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms