RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 AGR3Q8TD06 166 aa11.62□□□□□ -0.55
SGCE-203ENST00000425444 TWIST2Q8WVJ9 160 aa11.62□□□□□ -0.55
SGCE-203ENST00000425444 TMBIM1Q969X1 311 aa11.62□□□□□ -0.55
SGCE-203ENST00000425444 METTL2AQ96IZ6 378 aaKnown RBP11.62□□□□□ -0.55
SGCE-203ENST00000425444 OSBPL11Q9BXB4 747 aa11.62□□□□□ -0.55
SGCE-203ENST00000425444 ANGPTL4Q9BY76 406 aa11.62□□□□□ -0.55
SGCE-203ENST00000425444 FOLH1BQ9HBA9 442 aa11.62□□□□□ -0.55
SGCE-203ENST00000425444 ACKR4Q9NPB9 350 aa11.62□□□□□ -0.55
SGCE-203ENST00000425444 DDX18Q9NVP1 670 aaKnown RBP11.62□□□□□ -0.55
SGCE-203ENST00000425444 C1orf109Q9NX04 203 aa11.62□□□□□ -0.55
SGCE-203ENST00000425444 TAS2R9Q9NYW1 312 aa11.62□□□□□ -0.55
SGCE-203ENST00000425444 SPRR3Q9UBC9 169 aa11.62□□□□□ -0.55
SGCE-203ENST00000425444 C15orf41Q9Y2V0 281 aa11.62□□□□□ -0.55
SGCE-203ENST00000425444 WBP11Q9Y2W2 641 aaKnown RBP11.62□□□□□ -0.55
SGCE-203ENST00000425444 OR10H1Q9Y4A9 318 aa11.62□□□□□ -0.55
SGCE-203ENST00000425444 EML6Q6ZMW3 1958 aa11.61□□□□□ -0.55
SGCE-203ENST00000425444 PRAMEF25A6NGN4 478 aa11.61□□□□□ -0.55
SGCE-203ENST00000425444 MYO1GB0I1T2 1018 aa11.61□□□□□ -0.55
SGCE-203ENST00000425444 WDR1O75083 606 aa11.61□□□□□ -0.55
SGCE-203ENST00000425444 NME6O75414 186 aaPredicted RBP11.61□□□□□ -0.55
SGCE-203ENST00000425444 REM1O75628 298 aa11.61□□□□□ -0.55
SGCE-203ENST00000425444 LINC00032P0C843 101 aa11.61□□□□□ -0.55
SGCE-203ENST00000425444 ENDOUP21128 410 aaKnown RBP11.61□□□□□ -0.55
SGCE-203ENST00000425444 DRD5P21918 477 aa11.61□□□□□ -0.55
SGCE-203ENST00000425444 PRPH2P23942 346 aa11.61□□□□□ -0.55
SGCE-203ENST00000425444 MC3RP41968 323 aa11.61□□□□□ -0.55
SGCE-203ENST00000425444 CORO7P57737 925 aa11.61□□□□□ -0.55
SGCE-203ENST00000425444 NUP107P57740 925 aa11.61□□□□□ -0.55
SGCE-203ENST00000425444 DEFB113Q30KQ7 82 aa11.61□□□□□ -0.55
SGCE-203ENST00000425444 GALNTL6Q49A17 601 aa11.61□□□□□ -0.55
SGCE-203ENST00000425444 ARL13AQ5H913 290 aaPredicted RBP11.61□□□□□ -0.55
SGCE-203ENST00000425444 SH2D4BQ5SQS7 431 aa11.61□□□□□ -0.55
SGCE-203ENST00000425444 C1orf185Q5T7R7 199 aa11.61□□□□□ -0.55
SGCE-203ENST00000425444 DESI1Q6ICB0 168 aa11.61□□□□□ -0.55
SGCE-203ENST00000425444 ANGPTL8Q6UXH0 198 aa11.61□□□□□ -0.55
SGCE-203ENST00000425444 HOMEZQ8IX15 550 aa11.61□□□□□ -0.55
SGCE-203ENST00000425444 MREGQ8N565 214 aa11.61□□□□□ -0.55
SGCE-203ENST00000425444 OR7G2Q8NG99 324 aa11.61□□□□□ -0.55
SGCE-203ENST00000425444 OR1J4Q8NGS1 313 aa11.61□□□□□ -0.55
SGCE-203ENST00000425444 PPP1R14CQ8TAE6 165 aa11.61□□□□□ -0.55
SGCE-203ENST00000425444 HGDQ93099 445 aa11.61□□□□□ -0.55
SGCE-203ENST00000425444 GFM2Q969S9 779 aaKnown RBP11.61□□□□□ -0.55
SGCE-203ENST00000425444 TMCO6Q96DC7 493 aa11.61□□□□□ -0.55
SGCE-203ENST00000425444 TMEM41AQ96HV5 264 aa11.61□□□□□ -0.55
SGCE-203ENST00000425444 VSTM2LQ96N03 204 aa11.61□□□□□ -0.55
SGCE-203ENST00000425444 COL21A1Q96P44 957 aa11.61□□□□□ -0.55
SGCE-203ENST00000425444 GNRHR2Q96P88 292 aa11.61□□□□□ -0.55
SGCE-203ENST00000425444 BTBD9Q96Q07 612 aa11.61□□□□□ -0.55
SGCE-203ENST00000425444 NODALQ96S42 347 aa11.61□□□□□ -0.55
SGCE-203ENST00000425444 PARD6BQ9BYG5 372 aa11.61□□□□□ -0.55
SGCE-203ENST00000425444 GALNT9Q9HCQ5 603 aa11.61□□□□□ -0.55
SGCE-203ENST00000425444 RASSF1Q9NS23 344 aa11.61□□□□□ -0.55
SGCE-203ENST00000425444 MAPRE3Q9UPY8 281 aa11.61□□□□□ -0.55
SGCE-203ENST00000425444 GPR55Q9Y2T6 319 aaPredicted RBP11.61□□□□□ -0.55
SGCE-203ENST00000425444 L3MBTL1Q9Y468 752 aa11.61□□□□□ -0.55
SGCE-203ENST00000425444 CCL27Q9Y4X3 112 aa11.61□□□□□ -0.55
SGCE-203ENST00000425444 ZNF407Q9C0G0 2248 aa11.61□□□□□ -0.55
SGCE-203ENST00000425444 OR6C70A6NIJ9 312 aa11.6□□□□□ -0.55
SGCE-203ENST00000425444 ESPNB1AK53 854 aa11.6□□□□□ -0.55
SGCE-203ENST00000425444 TMEM233B4DJY2 109 aa11.6□□□□□ -0.55
SGCE-203ENST00000425444 PIP5K1BO14986 540 aa11.6□□□□□ -0.55
SGCE-203ENST00000425444 TO15178 435 aa11.6□□□□□ -0.55
SGCE-203ENST00000425444 RGS16O15492 202 aaPredicted RBP11.6□□□□□ -0.55
SGCE-203ENST00000425444 PLOD3O60568 738 aa11.6□□□□□ -0.55
SGCE-203ENST00000425444 ABCB7O75027 752 aa11.6□□□□□ -0.55
SGCE-203ENST00000425444 SLITRK5O94991 958 aa11.6□□□□□ -0.55
SGCE-203ENST00000425444 GABRA1P14867 456 aa11.6□□□□□ -0.55
SGCE-203ENST00000425444 TACR1P25103 407 aa11.6□□□□□ -0.55
SGCE-203ENST00000425444 GCKP35557 465 aa11.6□□□□□ -0.55
SGCE-203ENST00000425444 SERPINB5P36952 375 aa11.6□□□□□ -0.55
SGCE-203ENST00000425444 CDK9P50750 372 aaKnown RBP11.6□□□□□ -0.55
SGCE-203ENST00000425444 PSPHP78330 225 aa11.6□□□□□ -0.55
SGCE-203ENST00000425444 PPP2R2BQ00005 443 aa11.6□□□□□ -0.55
SGCE-203ENST00000425444 EFR3AQ14156 821 aa11.6□□□□□ -0.55
SGCE-203ENST00000425444 ZNHIT3Q15649 155 aaPredicted RBP11.6□□□□□ -0.55
SGCE-203ENST00000425444 TIGD3Q6B0B8 471 aa11.6□□□□□ -0.55
SGCE-203ENST00000425444 SLC30A6Q6NXT4 461 aa11.6□□□□□ -0.55
SGCE-203ENST00000425444 RNF165Q6ZSG1 346 aa11.6□□□□□ -0.55
SGCE-203ENST00000425444 LARP4Q71RC2 724 aaKnown RBP eCLIP11.6□□□□□ -0.55
SGCE-203ENST00000425444 CDC20BQ86Y33 519 aa11.6□□□□□ -0.55
SGCE-203ENST00000425444 SLC44A2Q8IWA5 706 aaPredicted RBP11.6□□□□□ -0.55
SGCE-203ENST00000425444 OR2T11Q8NH01 316 aa11.6□□□□□ -0.55
SGCE-203ENST00000425444 CLHC1Q8NHS4 586 aa11.6□□□□□ -0.55
SGCE-203ENST00000425444 EGLN2Q96KS0 407 aa11.6□□□□□ -0.55
SGCE-203ENST00000425444 AMDHD1Q96NU7 426 aa11.6□□□□□ -0.55
SGCE-203ENST00000425444 TSSK3Q96PN8 268 aa11.6□□□□□ -0.55
SGCE-203ENST00000425444 ADOQ96SZ5 270 aa11.6□□□□□ -0.55
SGCE-203ENST00000425444 CCT7Q99832 543 aa11.6□□□□□ -0.55
SGCE-203ENST00000425444 CENPHQ9H3R5 247 aa11.6□□□□□ -0.55
SGCE-203ENST00000425444 GLIPR2Q9H4G4 154 aa11.6□□□□□ -0.55
SGCE-203ENST00000425444 TMED5Q9Y3A6 229 aa11.6□□□□□ -0.55
SGCE-203ENST00000425444 TRAF6Q9Y4K3 522 aa11.6□□□□□ -0.55
SGCE-203ENST00000425444 DNAJC15Q9Y5T4 150 aa11.6□□□□□ -0.55
SGCE-203ENST00000425444 PHF3Q92576 2039 aaKnown RBP11.59□□□□□ -0.55
SGCE-203ENST00000425444 A0A087WV62 115 aa11.59□□□□□ -0.55
SGCE-203ENST00000425444 C2orf72A6NCS6 295 aa11.59□□□□□ -0.55
SGCE-203ENST00000425444 FAM47E-STBD1D6RA91 191 aa11.59□□□□□ -0.55
SGCE-203ENST00000425444 NPIPB8E9PQR5 432 aa11.59□□□□□ -0.55
SGCE-203ENST00000425444 SNPHO15079 494 aa11.59□□□□□ -0.55
SGCE-203ENST00000425444 LSM1O15116 133 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms