RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 GNB5O14775 395 aa16.35■□□□□ 0.21
IGHV3-47-201ENST00000425060 SNPHO15079 494 aa16.35■□□□□ 0.21
IGHV3-47-201ENST00000425060 LAMP1P11279 417 aa16.35■□□□□ 0.21
IGHV3-47-201ENST00000425060 ELAVL4P26378 380 aaKnown RBP16.35■□□□□ 0.21
IGHV3-47-201ENST00000425060 GDF1P27539 372 aa16.35■□□□□ 0.21
IGHV3-47-201ENST00000425060 RPL3P39023 403 aaKnown RBP16.35■□□□□ 0.21
IGHV3-47-201ENST00000425060 MASP1P48740 699 aa16.35■□□□□ 0.21
IGHV3-47-201ENST00000425060 SMSP52788 366 aa16.35■□□□□ 0.21
IGHV3-47-201ENST00000425060 GAS1P54826 345 aa16.35■□□□□ 0.21
IGHV3-47-201ENST00000425060 C21orf58P58505 322 aa16.35■□□□□ 0.21
IGHV3-47-201ENST00000425060 EFR3AQ14156 821 aa16.35■□□□□ 0.21
IGHV3-47-201ENST00000425060 PDCD2Q16342 344 aaPredicted RBP16.35■□□□□ 0.21
IGHV3-47-201ENST00000425060 HHATQ5VTY9 493 aa16.35■□□□□ 0.21
IGHV3-47-201ENST00000425060 RTL6Q6ICC9 239 aa16.35■□□□□ 0.21
IGHV3-47-201ENST00000425060 LARP4Q71RC2 724 aaKnown RBP eCLIP16.35■□□□□ 0.21
IGHV3-47-201ENST00000425060 WDR53Q7Z5U6 358 aaPredicted RBP16.35■□□□□ 0.21
IGHV3-47-201ENST00000425060 KRTCAP2Q8N6L1 136 aa16.35■□□□□ 0.21
IGHV3-47-201ENST00000425060 ZFP28Q8NHY6 868 aa16.35■□□□□ 0.21
IGHV3-47-201ENST00000425060 SARAFQ96BY9 339 aa16.35■□□□□ 0.21
IGHV3-47-201ENST00000425060 PAIP2Q9BPZ3 127 aaKnown RBP16.35■□□□□ 0.21
IGHV3-47-201ENST00000425060 AKTIPQ9H8T0 292 aa16.35■□□□□ 0.21
IGHV3-47-201ENST00000425060 SIRT3Q9NTG7 399 aaPredicted RBP16.35■□□□□ 0.21
IGHV3-47-201ENST00000425060 PNPOQ9NVS9 261 aa16.35■□□□□ 0.21
IGHV3-47-201ENST00000425060 KLF2Q9Y5W3 355 aaPredicted RBP16.35■□□□□ 0.21
IGHV3-47-201ENST00000425060 C2orf72A6NCS6 295 aa16.34■□□□□ 0.21
IGHV3-47-201ENST00000425060 TTC36A6NLP5 189 aa16.34■□□□□ 0.21
IGHV3-47-201ENST00000425060 SNNO75324 88 aaPredicted RBP16.34■□□□□ 0.21
IGHV3-47-201ENST00000425060 G6PDP11413 515 aa16.34■□□□□ 0.21
IGHV3-47-201ENST00000425060 CYP4B1P13584 511 aa16.34■□□□□ 0.21
IGHV3-47-201ENST00000425060 EFNA1P20827 205 aaPredicted RBP16.34■□□□□ 0.21
IGHV3-47-201ENST00000425060 GPC1P35052 558 aa16.34■□□□□ 0.21
IGHV3-47-201ENST00000425060 HPCAL1P37235 193 aa16.34■□□□□ 0.21
IGHV3-47-201ENST00000425060 DCTP40126 519 aa16.34■□□□□ 0.21
IGHV3-47-201ENST00000425060 MAD2L1Q13257 205 aaPredicted RBP16.34■□□□□ 0.21
IGHV3-47-201ENST00000425060 EXOSC6Q5RKV6 272 aaKnown RBP16.34■□□□□ 0.21
IGHV3-47-201ENST00000425060 ANGPTL8Q6UXH0 198 aa16.34■□□□□ 0.21
IGHV3-47-201ENST00000425060 KIRREL3Q8IZU9 778 aa16.34■□□□□ 0.21
IGHV3-47-201ENST00000425060 OR5M9Q8NGP3 310 aa16.34■□□□□ 0.21
IGHV3-47-201ENST00000425060 OR1J4Q8NGS1 313 aa16.34■□□□□ 0.21
IGHV3-47-201ENST00000425060 EFHD2Q96C19 240 aaPredicted RBP16.34■□□□□ 0.21
IGHV3-47-201ENST00000425060 KLRF1Q9NZS2 232 aa16.34■□□□□ 0.21
IGHV3-47-201ENST00000425060 ACAD8Q9UKU7 415 aa16.34■□□□□ 0.21
IGHV3-47-201ENST00000425060 CBLCQ9ULV8 474 aa16.34■□□□□ 0.21
IGHV3-47-201ENST00000425060 EIF3LQ9Y262 564 aaKnown RBP16.34■□□□□ 0.21
IGHV3-47-201ENST00000425060 OR10H1Q9Y4A9 318 aa16.34■□□□□ 0.21
IGHV3-47-201ENST00000425060 PCDHGB3Q9Y5G1 929 aa16.34■□□□□ 0.21
IGHV3-47-201ENST00000425060 UNC79Q9P2D8 2635 aa16.33■□□□□ 0.21
IGHV3-47-201ENST00000425060 B4DXG7 233 aa16.33■□□□□ 0.2
IGHV3-47-201ENST00000425060 FADS1O60427 444 aa16.33■□□□□ 0.2
IGHV3-47-201ENST00000425060 NKX2-2O95096 273 aa16.33■□□□□ 0.2
IGHV3-47-201ENST00000425060 IL33O95760 270 aa16.33■□□□□ 0.2
IGHV3-47-201ENST00000425060 PRPS1L1P21108 318 aa16.33■□□□□ 0.2
IGHV3-47-201ENST00000425060 IL12BP29460 328 aa16.33■□□□□ 0.2
IGHV3-47-201ENST00000425060 KRT20P35900 424 aa16.33■□□□□ 0.2
IGHV3-47-201ENST00000425060 TRPC1P48995 793 aa16.33■□□□□ 0.2
IGHV3-47-201ENST00000425060 CLDN8P56748 225 aa16.33■□□□□ 0.2
IGHV3-47-201ENST00000425060 ZNF630Q2M218 657 aaPredicted RBP16.33■□□□□ 0.2
IGHV3-47-201ENST00000425060 CPTPQ5TA50 214 aa16.33■□□□□ 0.2
IGHV3-47-201ENST00000425060 ZNF787Q6DD87 383 aa16.33■□□□□ 0.2
IGHV3-47-201ENST00000425060 TMEM211Q6ICI0 200 aa16.33■□□□□ 0.2
IGHV3-47-201ENST00000425060 LRRC34Q8IZ02 419 aa16.33■□□□□ 0.2
IGHV3-47-201ENST00000425060 NATD1Q8N6N6 113 aa16.33■□□□□ 0.2
IGHV3-47-201ENST00000425060 NUP43Q8NFH3 380 aa16.33■□□□□ 0.2
IGHV3-47-201ENST00000425060 CEP70Q8NHQ1 597 aa16.33■□□□□ 0.2
IGHV3-47-201ENST00000425060 PSMA8Q8TAA3 256 aa16.33■□□□□ 0.2
IGHV3-47-201ENST00000425060 ARL8AQ96BM9 186 aa16.33■□□□□ 0.2
IGHV3-47-201ENST00000425060 PPP1R36Q96LQ0 422 aa16.33■□□□□ 0.2
IGHV3-47-201ENST00000425060 MEAF6Q9HAF1 191 aa16.33■□□□□ 0.2
IGHV3-47-201ENST00000425060 Q9N2J8 555 aa16.33■□□□□ 0.2
IGHV3-47-201ENST00000425060 NOP53Q9NZM5 478 aaKnown RBP16.33■□□□□ 0.2
IGHV3-47-201ENST00000425060 FAM215AQ9Y5M1 114 aa16.33■□□□□ 0.2
IGHV3-47-201ENST00000425060 A0A1W2PRB8 838 aa16.32■□□□□ 0.2
IGHV3-47-201ENST00000425060 GXYLT2A0PJZ3 443 aa16.32■□□□□ 0.2
IGHV3-47-201ENST00000425060 PRSS44E7EML9 344 aa16.32■□□□□ 0.2
IGHV3-47-201ENST00000425060 EMC8O43402 210 aa16.32■□□□□ 0.2
IGHV3-47-201ENST00000425060 CBR3O75828 277 aa16.32■□□□□ 0.2
IGHV3-47-201ENST00000425060 TRAPPC6AO75865 159 aa16.32■□□□□ 0.2
IGHV3-47-201ENST00000425060 DDX5P17844 614 aaKnown RBP16.32■□□□□ 0.2
IGHV3-47-201ENST00000425060 ACVR2AP27037 513 aa16.32■□□□□ 0.2
IGHV3-47-201ENST00000425060 GRNP28799 593 aaKnown RBP16.32■□□□□ 0.2
IGHV3-47-201ENST00000425060 GABRA3P34903 492 aa16.32■□□□□ 0.2
IGHV3-47-201ENST00000425060 DIO3P55073 304 aa16.32■□□□□ 0.2
IGHV3-47-201ENST00000425060 MRPS22P82650 360 aaKnown RBP16.32■□□□□ 0.2
IGHV3-47-201ENST00000425060 CRYZQ08257 329 aaKnown RBP16.32■□□□□ 0.2
IGHV3-47-201ENST00000425060 EIPR1Q53HC9 387 aa16.32■□□□□ 0.2
IGHV3-47-201ENST00000425060 NHSL2Q5HYW2 709 aa16.32■□□□□ 0.2
IGHV3-47-201ENST00000425060 WLSQ5T9L3 541 aa16.32■□□□□ 0.2
IGHV3-47-201ENST00000425060 AGBL2Q5U5Z8 902 aa16.32■□□□□ 0.2
IGHV3-47-201ENST00000425060 SP5Q6BEB4 398 aaPredicted RBP16.32■□□□□ 0.2
IGHV3-47-201ENST00000425060 VASNQ6EMK4 673 aa16.32■□□□□ 0.2
IGHV3-47-201ENST00000425060 CAMKMTQ7Z624 323 aa16.32■□□□□ 0.2
IGHV3-47-201ENST00000425060 MGARPQ8TDB4 240 aa16.32■□□□□ 0.2
IGHV3-47-201ENST00000425060 PHF3Q92576 2039 aaKnown RBP16.32■□□□□ 0.2
IGHV3-47-201ENST00000425060 FAM120BQ96EK7 910 aaKnown RBP16.32■□□□□ 0.2
IGHV3-47-201ENST00000425060 TIMP4Q99727 224 aa16.32■□□□□ 0.2
IGHV3-47-201ENST00000425060 NUF2Q9BZD4 464 aa16.32■□□□□ 0.2
IGHV3-47-201ENST00000425060 EXO5Q9H790 373 aa16.32■□□□□ 0.2
IGHV3-47-201ENST00000425060 THAP1Q9NVV9 213 aa16.32■□□□□ 0.2
IGHV3-47-201ENST00000425060 WIF1Q9Y5W5 379 aa16.32■□□□□ 0.2
IGHV3-47-201ENST00000425060 FIGNL2A6NMB9 653 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 374 ms