RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 F8P00451 2351 aa13.86□□□□□ -0.19
USB1-202ENST00000423271 ANKHD1Q8IWZ3 2542 aaKnown RBP13.86□□□□□ -0.19
USB1-202ENST00000423271 CELSR1Q9NYQ6 3014 aa13.85□□□□□ -0.19
USB1-202ENST00000423271 ICOSLGO75144 302 aa13.85□□□□□ -0.19
USB1-202ENST00000423271 HOXD4P09016 255 aaPredicted RBP13.85□□□□□ -0.19
USB1-202ENST00000423271 CT45A8P0DMV1 189 aa13.85□□□□□ -0.19
USB1-202ENST00000423271 CT45A9P0DMV2 189 aa13.85□□□□□ -0.19
USB1-202ENST00000423271 BMP7P18075 431 aa13.85□□□□□ -0.19
USB1-202ENST00000423271 DDCP20711 480 aa13.85□□□□□ -0.19
USB1-202ENST00000423271 ELAVL4P26378 380 aaKnown RBP13.85□□□□□ -0.19
USB1-202ENST00000423271 SLC1A6P48664 564 aa13.85□□□□□ -0.19
USB1-202ENST00000423271 C2orf80Q0P641 193 aa13.85□□□□□ -0.19
USB1-202ENST00000423271 BST1Q10588 318 aa13.85□□□□□ -0.19
USB1-202ENST00000423271 UGT3A2Q3SY77 523 aa13.85□□□□□ -0.19
USB1-202ENST00000423271 CT45A2Q5DJT8 189 aa13.85□□□□□ -0.19
USB1-202ENST00000423271 FAM71E1Q6IPT2 247 aa13.85□□□□□ -0.19
USB1-202ENST00000423271 SLC30A6Q6NXT4 461 aa13.85□□□□□ -0.19
USB1-202ENST00000423271 TRIM46Q7Z4K8 759 aa13.85□□□□□ -0.19
USB1-202ENST00000423271 WDR53Q7Z5U6 358 aaPredicted RBP13.85□□□□□ -0.19
USB1-202ENST00000423271 YRDCQ86U90 279 aaKnown RBP13.85□□□□□ -0.19
USB1-202ENST00000423271 SAMD14Q8IZD0 417 aaPredicted RBP13.85□□□□□ -0.19
USB1-202ENST00000423271 FAM9CQ8IZT9 166 aa13.85□□□□□ -0.19
USB1-202ENST00000423271 CLYBLQ8N0X4 340 aa13.85□□□□□ -0.19
USB1-202ENST00000423271 FAM83FQ8NEG4 500 aaPredicted RBP13.85□□□□□ -0.19
USB1-202ENST00000423271 OR1J4Q8NGS1 313 aa13.85□□□□□ -0.19
USB1-202ENST00000423271 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.85□□□□□ -0.197e-6■■■■□ 22
USB1-202ENST00000423271 TWIST2Q8WVJ9 160 aa13.85□□□□□ -0.19
USB1-202ENST00000423271 BBS4Q96RK4 519 aa13.85□□□□□ -0.19
USB1-202ENST00000423271 SORT1Q99523 831 aa13.85□□□□□ -0.19
USB1-202ENST00000423271 UGT2B28Q9BY64 529 aa13.85□□□□□ -0.19
USB1-202ENST00000423271 C20orf27Q9GZN8 174 aa13.85□□□□□ -0.19
USB1-202ENST00000423271 PRDM14Q9GZV8 571 aa13.85□□□□□ -0.19
USB1-202ENST00000423271 ACBD3Q9H3P7 528 aa13.85□□□□□ -0.19
USB1-202ENST00000423271 MCCC2Q9HCC0 563 aa13.85□□□□□ -0.19
USB1-202ENST00000423271 SERHLQ9NQF3 203 aa13.85□□□□□ -0.19
USB1-202ENST00000423271 EXO1Q9UQ84 846 aaKnown RBP13.85□□□□□ -0.19
USB1-202ENST00000423271 CCL27Q9Y4X3 112 aa13.85□□□□□ -0.19
USB1-202ENST00000423271 MYO1GB0I1T2 1018 aa13.84□□□□□ -0.19
USB1-202ENST00000423271 PLOD3O60568 738 aa13.84□□□□□ -0.19
USB1-202ENST00000423271 ERN1O75460 977 aaKnown RBP13.84□□□□□ -0.19
USB1-202ENST00000423271 REM1O75628 298 aa13.84□□□□□ -0.19
USB1-202ENST00000423271 BCAS2O75934 225 aaPredicted RBP13.84□□□□□ -0.19
USB1-202ENST00000423271 RSL1D1O76021 490 aaKnown RBP13.84□□□□□ -0.19
USB1-202ENST00000423271 CHEK2O96017 543 aa13.84□□□□□ -0.19
USB1-202ENST00000423271 GSTM5P46439 218 aa13.84□□□□□ -0.19
USB1-202ENST00000423271 DLX5P56178 289 aa13.84□□□□□ -0.19
USB1-202ENST00000423271 STX3Q13277 289 aa13.84□□□□□ -0.19
USB1-202ENST00000423271 VASNQ6EMK4 673 aa13.84□□□□□ -0.19
USB1-202ENST00000423271 RNF165Q6ZSG1 346 aa13.84□□□□□ -0.19
USB1-202ENST00000423271 ZNF781Q8N8C0 355 aa13.84□□□□□ -0.19
USB1-202ENST00000423271 WDSUB1Q8N9V3 476 aa13.84□□□□□ -0.19
USB1-202ENST00000423271 RELL2Q8NC24 303 aaPredicted RBP13.84□□□□□ -0.19
USB1-202ENST00000423271 TNIP2Q8NFZ5 429 aa13.84□□□□□ -0.19
USB1-202ENST00000423271 OR4N2Q8NGD1 307 aa13.84□□□□□ -0.19
USB1-202ENST00000423271 ERP27Q96DN0 273 aa13.84□□□□□ -0.19
USB1-202ENST00000423271 SLC35A4Q96G79 324 aa13.84□□□□□ -0.19
USB1-202ENST00000423271 COL21A1Q96P44 957 aa13.84□□□□□ -0.19
USB1-202ENST00000423271 ADOQ96SZ5 270 aa13.84□□□□□ -0.19
USB1-202ENST00000423271 MYNNQ9NPC7 610 aa13.84□□□□□ -0.19
USB1-202ENST00000423271 CAMK2AQ9UQM7 478 aa13.84□□□□□ -0.19
USB1-202ENST00000423271 OR6C70A6NIJ9 312 aa13.83□□□□□ -0.2
USB1-202ENST00000423271 C17orf51A8MQB3 221 aa13.83□□□□□ -0.2
USB1-202ENST00000423271 AHRRA9YTQ3 701 aa13.83□□□□□ -0.2
USB1-202ENST00000423271 FAM47E-STBD1D6RA91 191 aa13.83□□□□□ -0.2
USB1-202ENST00000423271 SLC28A1O00337 649 aa13.83□□□□□ -0.2
USB1-202ENST00000423271 PIP5K1BO14986 540 aa13.83□□□□□ -0.2
USB1-202ENST00000423271 TSPAN2O60636 221 aa13.83□□□□□ -0.2
USB1-202ENST00000423271 SKAP2O75563 359 aaPredicted RBP13.83□□□□□ -0.2
USB1-202ENST00000423271 EPPINO95925 133 aa13.83□□□□□ -0.2
USB1-202ENST00000423271 JUNP05412 331 aaKnown RBP13.83□□□□□ -0.2
USB1-202ENST00000423271 LINC00032P0C843 101 aa13.83□□□□□ -0.2
USB1-202ENST00000423271 TACR1P25103 407 aa13.83□□□□□ -0.2
USB1-202ENST00000423271 MPIP34949 423 aa13.83□□□□□ -0.2
USB1-202ENST00000423271 MC3RP41968 323 aa13.83□□□□□ -0.2
USB1-202ENST00000423271 NCBP2P52298 156 aaKnown RBP eCLIP13.83□□□□□ -0.2
USB1-202ENST00000423271 PPP2R2AP63151 447 aa13.83□□□□□ -0.2
USB1-202ENST00000423271 ZNF155Q12901 538 aaPredicted RBP13.83□□□□□ -0.2
USB1-202ENST00000423271 SNTA1Q13424 505 aa13.83□□□□□ -0.2
USB1-202ENST00000423271 SNTB1Q13884 538 aaKnown RBP13.83□□□□□ -0.2
USB1-202ENST00000423271 SLC25A35Q3KQZ1 300 aa13.83□□□□□ -0.2
USB1-202ENST00000423271 NHSL2Q5HYW2 709 aa13.83□□□□□ -0.2
USB1-202ENST00000423271 TMEM107Q6UX40 140 aa13.83□□□□□ -0.2
USB1-202ENST00000423271 Q6ZSR9 355 aa13.83□□□□□ -0.2
USB1-202ENST00000423271 SLC44A2Q8IWA5 706 aaPredicted RBP13.83□□□□□ -0.2
USB1-202ENST00000423271 DDIASQ8IXT1 998 aa13.83□□□□□ -0.2
USB1-202ENST00000423271 OR2T11Q8NH01 316 aa13.83□□□□□ -0.2
USB1-202ENST00000423271 ABTB1Q969K4 478 aaPredicted RBP13.83□□□□□ -0.2
USB1-202ENST00000423271 EFHD2Q96C19 240 aaPredicted RBP13.83□□□□□ -0.2
USB1-202ENST00000423271 WDYHV1Q96HA8 205 aa13.83□□□□□ -0.2
USB1-202ENST00000423271 MIEF1Q9NQG6 463 aa13.83□□□□□ -0.2
USB1-202ENST00000423271 ITGB1BP2Q9UKP3 347 aa13.83□□□□□ -0.2
USB1-202ENST00000423271 RAP2CQ9Y3L5 183 aa13.83□□□□□ -0.2
USB1-202ENST00000423271 L3MBTL1Q9Y468 752 aa13.83□□□□□ -0.2
USB1-202ENST00000423271 DOCK7Q96N67 2140 aa13.82□□□□□ -0.2
USB1-202ENST00000423271 HSPB2A8KAH6 182 aa13.82□□□□□ -0.2
USB1-202ENST00000423271 B4DXG7 233 aa13.82□□□□□ -0.2
USB1-202ENST00000423271 RGS14O43566 566 aa13.82□□□□□ -0.2
USB1-202ENST00000423271 BMP5P22003 454 aa13.82□□□□□ -0.2
USB1-202ENST00000423271 CEACAM8P31997 349 aaPredicted RBP13.82□□□□□ -0.2
USB1-202ENST00000423271 KIAA0040Q15053 153 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms