RNA–Protein interactions for RNA: ENST00000422190.6

ATP2C1-203, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-203ENST00000422190 LINC00471Q8N535 108 aa5.91□□□□□ -1.46
ATP2C1-203ENST00000422190 NANOGP1Q8N7R0 232 aa5.91□□□□□ -1.46
ATP2C1-203ENST00000422190 PSD4Q8NDX1 1056 aa5.91□□□□□ -1.46
ATP2C1-203ENST00000422190 OR52I1Q8NGK6 324 aa5.91□□□□□ -1.46
ATP2C1-203ENST00000422190 OR8D4Q8NGM9 314 aa5.91□□□□□ -1.46
ATP2C1-203ENST00000422190 MRPL38Q96DV4 380 aaKnown RBP5.91□□□□□ -1.46
ATP2C1-203ENST00000422190 ARSGQ96EG1 525 aa5.91□□□□□ -1.46
ATP2C1-203ENST00000422190 TRMT61AQ96FX7 289 aaKnown RBP5.91□□□□□ -1.46
ATP2C1-203ENST00000422190 SCARF2Q96GP6 870 aaPredicted RBP5.91□□□□□ -1.46
ATP2C1-203ENST00000422190 C10orf90Q96M02 699 aa5.91□□□□□ -1.46
ATP2C1-203ENST00000422190 TRNT1Q96Q11 434 aaKnown RBP5.91□□□□□ -1.46
ATP2C1-203ENST00000422190 SARGQ9BW04 601 aa5.91□□□□□ -1.46
ATP2C1-203ENST00000422190 CACYBPQ9HB71 228 aaKnown RBP5.91□□□□□ -1.46
ATP2C1-203ENST00000422190 TOR4AQ9NXH8 423 aa5.91□□□□□ -1.46
ATP2C1-203ENST00000422190 GIN1Q9NXP7 522 aa5.91□□□□□ -1.46
ATP2C1-203ENST00000422190 CALML5Q9NZT1 146 aa5.91□□□□□ -1.46
ATP2C1-203ENST00000422190 MSRAQ9UJ68 235 aa5.91□□□□□ -1.46
ATP2C1-203ENST00000422190 LIPT1Q9Y234 373 aa5.91□□□□□ -1.46
ATP2C1-203ENST00000422190 LSM2Q9Y333 95 aaKnown RBP5.91□□□□□ -1.46
ATP2C1-203ENST00000422190 WDR45Q9Y484 360 aa5.91□□□□□ -1.46
ATP2C1-203ENST00000422190 CHST2Q9Y4C5 530 aa5.91□□□□□ -1.46
ATP2C1-203ENST00000422190 SPIN1Q9Y657 262 aaPredicted RBP5.91□□□□□ -1.46
ATP2C1-203ENST00000422190 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 NPIPA5A0A0B4J1W7 369 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 NPIPA7E9PJI5 369 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 LRRTM2O43300 516 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 B3GALT2O43825 422 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 LDB3O75112 727 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 ALOX5P09917 674 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 NPIPA8P0DM63 369 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 GNSP15586 552 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 MYL12AP19105 171 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 GSTM3P21266 225 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 TLX1P31314 330 aaPredicted RBP5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 IFNGR2P38484 337 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 ETV5P41161 510 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 MAGEA10P43363 369 aaPredicted RBP5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 EIF2B2P49770 351 aaKnown RBP5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 ETV1P50549 477 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 KIAA1024LP59773 190 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 CDK5Q00535 292 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 TNFRSF17Q02223 184 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 GPR18Q14330 331 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 SUZ12Q15022 739 aaKnown RBP5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 TRMT12Q53H54 448 aaKnown RBP5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 ENTPD8Q5MY95 495 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 MFSD12Q6NUT3 480 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 PRSS41Q7RTY9 318 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 NRMQ8IXM6 262 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 PROKR2Q8NFJ6 384 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 PIGXQ8TBF5 258 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 GNPDA2Q8TDQ7 276 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 HPS1Q92902 700 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 SLC22A18Q96BI1 424 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 GIMAP5Q96F15 307 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 OR2A14Q96R47 310 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 OR2A5Q96R48 311 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 TAPBPLQ9BX59 468 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 POLMQ9NP87 494 aaPredicted RBP5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 SACM1LQ9NTJ5 587 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 ERVK13-1Q9NX77 482 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 ACTR10Q9NZ32 417 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 CLEC1BQ9P126 229 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 KLHL3Q9UH77 587 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 KLF15Q9UIH9 416 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 SSR3Q9UNL2 185 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 MRPS2Q9Y399 296 aaKnown RBP5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 PIAS3Q9Y6X2 628 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 SPTBP11277 2137 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 SZT2Q5T011 3432 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 CENPVL1A0A0U1RR11 272 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 SAGE2PA6NJ88 616 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 DUXAA6NLW8 204 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 SYT5O00445 386 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 PIP5K1CO60331 668 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 RAB36O95755 333 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 TSPAN19P0C672 248 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 NDUFV2P19404 249 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 NT5EP21589 574 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 HNRNPA2B1P22626 353 aaKnown RBP5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 MAGEA8P43361 318 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 TSFMP43897 325 aaKnown RBP5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 LIMK1P53667 647 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 SRP54P61011 504 aaKnown RBP5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 MADCAM1Q13477 382 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 DUSP5Q16690 384 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 ALG11Q2TAA5 492 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 PUS10Q3MIT2 529 aaKnown RBP5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 TYW3Q6IPR3 259 aaKnown RBP5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 C19orf48Q6RUI8 117 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 TMEM92Q6UXU6 159 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 CD300LDQ6UXZ3 194 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 FRRS1Q6ZNA5 592 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 LHFPL3Q86UP9 236 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 PEX5LQ8IYB4 626 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 ZFP41Q8N8Y5 198 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 MINDY2Q8NBR6 621 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 OR5T3Q8NGG3 340 aa5.9□□□□□ -1.46
ATP2C1-203ENST00000422190 HMGB4Q8WW32 186 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms