RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 GALNT12Q8IXK2 581 aa10.25□□□□□ -0.77
DDX56-203ENST00000421223 ZNF681Q96N22 645 aa10.25□□□□□ -0.77
DDX56-203ENST00000421223 MCHR1Q99705 422 aa10.25□□□□□ -0.77
DDX56-203ENST00000421223 ACTRT3Q9BYD9 372 aa10.25□□□□□ -0.77
DDX56-203ENST00000421223 ZNF576Q9H609 170 aa10.25□□□□□ -0.77
DDX56-203ENST00000421223 SEMA4GQ9NTN9 838 aa10.25□□□□□ -0.77
DDX56-203ENST00000421223 FBXO34Q9NWN3 711 aa10.25□□□□□ -0.77
DDX56-203ENST00000421223 ZSCAN32Q9NX65 697 aa10.25□□□□□ -0.77
DDX56-203ENST00000421223 COL4A3Q01955 1670 aa10.25□□□□□ -0.77
DDX56-203ENST00000421223 E9PQ18 207 aa10.25□□□□□ -0.77
DDX56-203ENST00000421223 RGS5O15539 181 aa10.25□□□□□ -0.77
DDX56-203ENST00000421223 CYP7B1O75881 506 aa10.25□□□□□ -0.77
DDX56-203ENST00000421223 APBB3O95704 486 aa10.25□□□□□ -0.77
DDX56-203ENST00000421223 IFNA8P32881 189 aa10.25□□□□□ -0.77
DDX56-203ENST00000421223 ATP6V1E1P36543 226 aa10.25□□□□□ -0.77
DDX56-203ENST00000421223 GIPRP48546 466 aa10.25□□□□□ -0.77
DDX56-203ENST00000421223 ILKQ13418 452 aa10.25□□□□□ -0.77
DDX56-203ENST00000421223 ERV3-1Q14264 604 aa10.25□□□□□ -0.77
DDX56-203ENST00000421223 NNATQ16517 81 aa10.25□□□□□ -0.77
DDX56-203ENST00000421223 DUSP5Q16690 384 aa10.25□□□□□ -0.77
DDX56-203ENST00000421223 FAM214AQ32MH5 1076 aa10.25□□□□□ -0.77
DDX56-203ENST00000421223 SLC30A6Q6NXT4 461 aa10.25□□□□□ -0.77
DDX56-203ENST00000421223 USP30Q70CQ3 517 aa10.25□□□□□ -0.77
DDX56-203ENST00000421223 SLC22A18ASQ8N1D0 253 aa10.25□□□□□ -0.77
DDX56-203ENST00000421223 KLHL6Q8WZ60 621 aa10.25□□□□□ -0.77
DDX56-203ENST00000421223 FCGR1BQ92637 280 aa10.25□□□□□ -0.77
DDX56-203ENST00000421223 RSC1A1Q92681 617 aa10.25□□□□□ -0.77
DDX56-203ENST00000421223 GAS2L1Q99501 681 aaPredicted RBP10.25□□□□□ -0.77
DDX56-203ENST00000421223 ZFYVE21Q9BQ24 234 aa10.25□□□□□ -0.77
DDX56-203ENST00000421223 BCL7BQ9BQE9 202 aa10.25□□□□□ -0.77
DDX56-203ENST00000421223 POLR2J2Q9GZM3 115 aaKnown RBP10.25□□□□□ -0.77
DDX56-203ENST00000421223 PLCXD1Q9NUJ7 323 aa10.25□□□□□ -0.77
DDX56-203ENST00000421223 EVA1BQ9NVM1 165 aa10.25□□□□□ -0.77
DDX56-203ENST00000421223 LYARQ9NX58 379 aaKnown RBP10.25□□□□□ -0.77
DDX56-203ENST00000421223 SCML1Q9UN30 329 aa10.25□□□□□ -0.77
DDX56-203ENST00000421223 FUOMA2VDF0 154 aa10.25□□□□□ -0.77
DDX56-203ENST00000421223 A8MVJ9 347 aa10.25□□□□□ -0.77
DDX56-203ENST00000421223 CDH3P22223 829 aa10.25□□□□□ -0.77
DDX56-203ENST00000421223 TNFRSF17Q02223 184 aa10.25□□□□□ -0.77
DDX56-203ENST00000421223 DOC2BQ14184 412 aa10.25□□□□□ -0.77
DDX56-203ENST00000421223 KIR2DS3Q14952 304 aa10.25□□□□□ -0.77
DDX56-203ENST00000421223 MLC1Q15049 377 aa10.25□□□□□ -0.77
DDX56-203ENST00000421223 INAVAQ3KP66 663 aa10.25□□□□□ -0.77
DDX56-203ENST00000421223 CDC73Q6P1J9 531 aa10.25□□□□□ -0.77
DDX56-203ENST00000421223 SMARCD3Q6STE5 483 aa10.25□□□□□ -0.77
DDX56-203ENST00000421223 SLC46A3Q7Z3Q1 461 aa10.25□□□□□ -0.77
DDX56-203ENST00000421223 CAMKVQ8NCB2 501 aa10.25□□□□□ -0.77
DDX56-203ENST00000421223 TMEM52Q8NDY8 209 aa10.25□□□□□ -0.77
DDX56-203ENST00000421223 MAN2C1Q9NTJ4 1040 aa10.25□□□□□ -0.77
DDX56-203ENST00000421223 TOR4AQ9NXH8 423 aa10.25□□□□□ -0.77
DDX56-203ENST00000421223 DAPP1Q9UN19 280 aa10.25□□□□□ -0.77
DDX56-203ENST00000421223 URADA6NGE7 173 aa10.24□□□□□ -0.77
DDX56-203ENST00000421223 PRR19A6NJB7 356 aa10.24□□□□□ -0.77
DDX56-203ENST00000421223 CCDC85CA6NKD9 419 aa10.24□□□□□ -0.77
DDX56-203ENST00000421223 LRRTM2O43300 516 aa10.24□□□□□ -0.77
DDX56-203ENST00000421223 FGF17O60258 216 aa10.24□□□□□ -0.77
DDX56-203ENST00000421223 PRKNO60260 465 aaPredicted RBP10.24□□□□□ -0.77
DDX56-203ENST00000421223 KIAA0513O60268 411 aa10.24□□□□□ -0.77
DDX56-203ENST00000421223 PIP5K1CO60331 668 aa10.24□□□□□ -0.77
DDX56-203ENST00000421223 RDH16O75452 317 aa10.24□□□□□ -0.77
DDX56-203ENST00000421223 CD97P48960 835 aa10.24□□□□□ -0.77
DDX56-203ENST00000421223 MRPS21P82921 87 aaKnown RBP10.24□□□□□ -0.77
DDX56-203ENST00000421223 ZNF91Q05481 1191 aa10.24□□□□□ -0.77
DDX56-203ENST00000421223 SFSWAPQ12872 951 aaKnown RBP10.24□□□□□ -0.77
DDX56-203ENST00000421223 CARTPTQ16568 116 aa10.24□□□□□ -0.77
DDX56-203ENST00000421223 ENTPD8Q5MY95 495 aa10.24□□□□□ -0.77
DDX56-203ENST00000421223 LIPKQ5VXJ0 399 aa10.24□□□□□ -0.77
DDX56-203ENST00000421223 OOSP2Q86WS3 158 aa10.24□□□□□ -0.77
DDX56-203ENST00000421223 NRMQ8IXM6 262 aa10.24□□□□□ -0.77
DDX56-203ENST00000421223 OR9A4Q8NGU2 314 aa10.24□□□□□ -0.77
DDX56-203ENST00000421223 TEX47Q8TBZ9 253 aa10.24□□□□□ -0.77
DDX56-203ENST00000421223 PRRC1Q96M27 445 aa10.24□□□□□ -0.77
DDX56-203ENST00000421223 AKIP1Q9NQ31 210 aa10.24□□□□□ -0.77
DDX56-203ENST00000421223 LINC00854A0A1B0GVQ3 168 aa10.24□□□□□ -0.77
DDX56-203ENST00000421223 A0A1W2PRQ8 180 aa10.24□□□□□ -0.77
DDX56-203ENST00000421223 ARHGAP33O14559 1287 aa10.24□□□□□ -0.77
DDX56-203ENST00000421223 GNB5O14775 395 aa10.24□□□□□ -0.77
DDX56-203ENST00000421223 MYL12BO14950 172 aa10.24□□□□□ -0.77
DDX56-203ENST00000421223 TBX1O43435 398 aa10.24□□□□□ -0.77
DDX56-203ENST00000421223 MPZL2O60487 215 aa10.24□□□□□ -0.77
DDX56-203ENST00000421223 ZIC2O95409 532 aaPredicted RBP10.24□□□□□ -0.77
DDX56-203ENST00000421223 OXSR1O95747 527 aaPredicted RBP10.24□□□□□ -0.77
DDX56-203ENST00000421223 PORP16435 677 aaPredicted RBP10.24□□□□□ -0.77
DDX56-203ENST00000421223 FUT1P19526 365 aa10.24□□□□□ -0.77
DDX56-203ENST00000421223 HHEXQ03014 270 aa10.24□□□□□ -0.77
DDX56-203ENST00000421223 MFSD12Q6NUT3 480 aa10.24□□□□□ -0.77
DDX56-203ENST00000421223 TMEM64Q6YI46 380 aa10.24□□□□□ -0.77
DDX56-203ENST00000421223 ABHD13Q7L211 337 aa10.24□□□□□ -0.77
DDX56-203ENST00000421223 CSNK1A1LQ8N752 337 aa10.24□□□□□ -0.77
DDX56-203ENST00000421223 COX18Q8N8Q8 333 aa10.24□□□□□ -0.77
DDX56-203ENST00000421223 ZFP41Q8N8Y5 198 aa10.24□□□□□ -0.77
DDX56-203ENST00000421223 OR8J1Q8NGP2 316 aa10.24□□□□□ -0.77
DDX56-203ENST00000421223 OR6Q1Q8NGQ2 317 aa10.24□□□□□ -0.77
DDX56-203ENST00000421223 TMEM255BQ8WV15 326 aa10.24□□□□□ -0.77
DDX56-203ENST00000421223 VMP1Q96GC9 406 aa10.24□□□□□ -0.77
DDX56-203ENST00000421223 SCARF2Q96GP6 870 aaPredicted RBP10.24□□□□□ -0.77
DDX56-203ENST00000421223 SIGLEC11Q96RL6 698 aa10.24□□□□□ -0.77
DDX56-203ENST00000421223 FAM60AQ9NP50 221 aa10.24□□□□□ -0.77
DDX56-203ENST00000421223 C2orf74A8MZ97 194 aa10.23□□□□□ -0.77
DDX56-203ENST00000421223 PEX12O00623 359 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms