RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 SLC39A3Q9BRY0 314 aa15.23■□□□□ 0.03
UPF3AP3-201ENST00000420996 ANKRA2Q9H9E1 313 aa15.23■□□□□ 0.03
UPF3AP3-201ENST00000420996 UBTD1Q9HAC8 227 aa15.23■□□□□ 0.03
UPF3AP3-201ENST00000420996 XPR1Q9UBH6 696 aa15.23■□□□□ 0.03
UPF3AP3-201ENST00000420996 HEY2Q9UBP5 337 aa15.23■□□□□ 0.03
UPF3AP3-201ENST00000420996 SNX6Q9UNH7 406 aa15.23■□□□□ 0.03
UPF3AP3-201ENST00000420996 KIAA1324LA8MWY0 1029 aaPredicted RBP15.22■□□□□ 0.03
UPF3AP3-201ENST00000420996 B4DXG7 233 aa15.22■□□□□ 0.03
UPF3AP3-201ENST00000420996 SMAD7O15105 426 aaKnown RBP15.22■□□□□ 0.03
UPF3AP3-201ENST00000420996 RPS17P08708 135 aaKnown RBP15.22■□□□□ 0.03
UPF3AP3-201ENST00000420996 POU2F1P14859 743 aa15.22■□□□□ 0.03
UPF3AP3-201ENST00000420996 TCEA1P23193 301 aaKnown RBP15.22■□□□□ 0.03
UPF3AP3-201ENST00000420996 PCSK6P29122 969 aa15.22■□□□□ 0.03
UPF3AP3-201ENST00000420996 MRPS22P82650 360 aaKnown RBP15.22■□□□□ 0.03
UPF3AP3-201ENST00000420996 ERCC6LQ2NKX8 1250 aa15.22■□□□□ 0.03
UPF3AP3-201ENST00000420996 LETMD1Q6P1Q0 360 aa15.22■□□□□ 0.03
UPF3AP3-201ENST00000420996 RPS27LQ71UM5 84 aaKnown RBP15.22■□□□□ 0.03
UPF3AP3-201ENST00000420996 SAMD14Q8IZD0 417 aaPredicted RBP15.22■□□□□ 0.03
UPF3AP3-201ENST00000420996 MEIOBQ8N635 442 aa15.22■□□□□ 0.03
UPF3AP3-201ENST00000420996 OR4K17Q8NGC6 315 aa15.22■□□□□ 0.03
UPF3AP3-201ENST00000420996 MARK4Q96L34 752 aa15.22■□□□□ 0.03
UPF3AP3-201ENST00000420996 VSTM2LQ96N03 204 aa15.22■□□□□ 0.03
UPF3AP3-201ENST00000420996 MDFIQ99750 246 aa15.22■□□□□ 0.03
UPF3AP3-201ENST00000420996 OPN3Q9H1Y3 402 aaPredicted RBP15.22■□□□□ 0.03
UPF3AP3-201ENST00000420996 PFDN4Q9NQP4 134 aa15.22■□□□□ 0.03
UPF3AP3-201ENST00000420996 VPS29Q9UBQ0 182 aa15.22■□□□□ 0.03
UPF3AP3-201ENST00000420996 C16orf97H3BN30 126 aa15.21■□□□□ 0.03
UPF3AP3-201ENST00000420996 PPP6CO00743 305 aa15.21■□□□□ 0.03
UPF3AP3-201ENST00000420996 EMC8O43402 210 aa15.21■□□□□ 0.03
UPF3AP3-201ENST00000420996 NME6O75414 186 aaPredicted RBP15.21■□□□□ 0.03
UPF3AP3-201ENST00000420996 TNFRSF21O75509 655 aa15.21■□□□□ 0.03
UPF3AP3-201ENST00000420996 ESRRBO95718 433 aa15.21■□□□□ 0.03
UPF3AP3-201ENST00000420996 CGAP01215 116 aa15.21■□□□□ 0.03
UPF3AP3-201ENST00000420996 MAGEA12P43365 314 aa15.21■□□□□ 0.03
UPF3AP3-201ENST00000420996 EEFSECP57772 596 aaKnown RBP15.21■□□□□ 0.03
UPF3AP3-201ENST00000420996 TSNAXIP1Q2TAA8 658 aa15.21■□□□□ 0.03
UPF3AP3-201ENST00000420996 NPSR1Q6W5P4 371 aa15.21■□□□□ 0.03
UPF3AP3-201ENST00000420996 UBQLNLQ8IYU4 475 aa15.21■□□□□ 0.03
UPF3AP3-201ENST00000420996 FADS6Q8N9I5 356 aa15.21■□□□□ 0.03
UPF3AP3-201ENST00000420996 OR9A2Q8NGT5 310 aa15.21■□□□□ 0.03
UPF3AP3-201ENST00000420996 PPP1R14CQ8TAE6 165 aa15.21■□□□□ 0.03
UPF3AP3-201ENST00000420996 ZNF483Q8TF39 744 aaPredicted RBP15.21■□□□□ 0.03
UPF3AP3-201ENST00000420996 FIG4Q92562 907 aa15.21■□□□□ 0.03
UPF3AP3-201ENST00000420996 KAT2AQ92830 837 aa15.21■□□□□ 0.03
UPF3AP3-201ENST00000420996 PERPQ96FX8 193 aa15.21■□□□□ 0.03
UPF3AP3-201ENST00000420996 ZNF845Q96IR2 970 aaPredicted RBP15.21■□□□□ 0.03
UPF3AP3-201ENST00000420996 ACSS3Q9H6R3 686 aa15.21■□□□□ 0.03
UPF3AP3-201ENST00000420996 FOLH1BQ9HBA9 442 aa15.21■□□□□ 0.03
UPF3AP3-201ENST00000420996 MCM8Q9UJA3 840 aa15.21■□□□□ 0.03
UPF3AP3-201ENST00000420996 PCNX3Q9H6A9 2034 aa15.21■□□□□ 0.02
UPF3AP3-201ENST00000420996 TRIM64A6NGJ6 449 aa15.2■□□□□ 0.02
UPF3AP3-201ENST00000420996 TRIM64BA6NI03 449 aa15.2■□□□□ 0.02
UPF3AP3-201ENST00000420996 LINC01387J3KSC0 135 aa15.2■□□□□ 0.02
UPF3AP3-201ENST00000420996 PLOD3O60568 738 aa15.2■□□□□ 0.02
UPF3AP3-201ENST00000420996 CD8BP10966 210 aa15.2■□□□□ 0.02
UPF3AP3-201ENST00000420996 COL6A2P12110 1019 aa15.2■□□□□ 0.02
UPF3AP3-201ENST00000420996 HSD3B1P14060 373 aa15.2■□□□□ 0.02
UPF3AP3-201ENST00000420996 HSD3B2P26439 372 aa15.2■□□□□ 0.02
UPF3AP3-201ENST00000420996 LOXP28300 417 aaPredicted RBP15.2■□□□□ 0.02
UPF3AP3-201ENST00000420996 CCKARP32238 428 aa15.2■□□□□ 0.02
UPF3AP3-201ENST00000420996 PHBP35232 272 aa15.2■□□□□ 0.02
UPF3AP3-201ENST00000420996 KCNJ5P48544 419 aa15.2■□□□□ 0.02
UPF3AP3-201ENST00000420996 CDH13P55290 713 aa15.2■□□□□ 0.02
UPF3AP3-201ENST00000420996 CLDN15P56746 228 aa15.2■□□□□ 0.02
UPF3AP3-201ENST00000420996 FGFBP1Q14512 234 aa15.2■□□□□ 0.02
UPF3AP3-201ENST00000420996 ZNF550Q7Z398 422 aa15.2■□□□□ 0.02
UPF3AP3-201ENST00000420996 SLC44A2Q8IWA5 706 aaPredicted RBP15.2■□□□□ 0.02
UPF3AP3-201ENST00000420996 OR2M3Q8NG83 312 aa15.2■□□□□ 0.02
UPF3AP3-201ENST00000420996 EXOSC8Q96B26 276 aaKnown RBP15.2■□□□□ 0.02
UPF3AP3-201ENST00000420996 EFHD2Q96C19 240 aaPredicted RBP15.2■□□□□ 0.02
UPF3AP3-201ENST00000420996 HS3ST6Q96QI5 342 aa15.2■□□□□ 0.02
UPF3AP3-201ENST00000420996 HBEGFQ99075 208 aa15.2■□□□□ 0.02
UPF3AP3-201ENST00000420996 MRPL57Q9BQC6 102 aaKnown RBP15.2■□□□□ 0.02
UPF3AP3-201ENST00000420996 C1QTNF3Q9BXJ4 246 aa15.2■□□□□ 0.02
UPF3AP3-201ENST00000420996 GSX2Q9BZM3 304 aa15.2■□□□□ 0.02
UPF3AP3-201ENST00000420996 DSN1Q9H410 356 aa15.2■□□□□ 0.02
UPF3AP3-201ENST00000420996 RNF122Q9H9V4 155 aa15.2■□□□□ 0.02
UPF3AP3-201ENST00000420996 TAS2R9Q9NYW1 312 aa15.2■□□□□ 0.02
UPF3AP3-201ENST00000420996 PPP4R1LQ9P1A2 415 aa15.2■□□□□ 0.02
UPF3AP3-201ENST00000420996 TRPS1Q9UHF7 1281 aa15.2■□□□□ 0.02
UPF3AP3-201ENST00000420996 ZNF225Q9UK10 706 aa15.2■□□□□ 0.02
UPF3AP3-201ENST00000420996 ZNF175Q9Y473 711 aa15.2■□□□□ 0.02
UPF3AP3-201ENST00000420996 JMJD1CQ15652 2540 aa15.19■□□□□ 0.02
UPF3AP3-201ENST00000420996 C17orf51A8MQB3 221 aa15.19■□□□□ 0.02
UPF3AP3-201ENST00000420996 OR4F21O95013 312 aa15.19■□□□□ 0.02
UPF3AP3-201ENST00000420996 IL3P08700 152 aa15.19■□□□□ 0.02
UPF3AP3-201ENST00000420996 TSPAN8P19075 237 aa15.19■□□□□ 0.02
UPF3AP3-201ENST00000420996 HK1P19367 917 aa15.19■□□□□ 0.02
UPF3AP3-201ENST00000420996 EVI2BP34910 448 aa15.19■□□□□ 0.02
UPF3AP3-201ENST00000420996 SUCLG1P53597 346 aaKnown RBP15.19■□□□□ 0.02
UPF3AP3-201ENST00000420996 SIRPAP78324 504 aa15.19■□□□□ 0.02
UPF3AP3-201ENST00000420996 PPP2R2BQ00005 443 aa15.19■□□□□ 0.02
UPF3AP3-201ENST00000420996 GANABQ14697 944 aaKnown RBP15.19■□□□□ 0.02
UPF3AP3-201ENST00000420996 RAET1LQ5VY80 246 aa15.19■□□□□ 0.02
UPF3AP3-201ENST00000420996 ZNF610Q8N9Z0 462 aa15.19■□□□□ 0.02
UPF3AP3-201ENST00000420996 OR4N2Q8NGD1 307 aa15.19■□□□□ 0.02
UPF3AP3-201ENST00000420996 CAVIN3Q969G5 261 aa15.19■□□□□ 0.02
UPF3AP3-201ENST00000420996 MTBPQ96DY7 904 aa15.19■□□□□ 0.02
UPF3AP3-201ENST00000420996 ZC3HAV1LQ96H79 300 aaKnown RBP15.19■□□□□ 0.02
UPF3AP3-201ENST00000420996 PINK1Q9BXM7 581 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms