RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 LARP4Q71RC2 724 aaKnown RBP eCLIP15.76■□□□□ 0.11
MSH6-203ENST00000420813 CAMKMTQ7Z624 323 aa15.76■□□□□ 0.11
MSH6-203ENST00000420813 RDH11Q8TC12 318 aa15.76■□□□□ 0.11
MSH6-203ENST00000420813 CCDC126Q96EE4 140 aa15.76■□□□□ 0.11
MSH6-203ENST00000420813 SENP1Q9P0U3 644 aa15.76■□□□□ 0.11
MSH6-203ENST00000420813 CLCF1Q9UBD9 225 aa15.76■□□□□ 0.11
MSH6-203ENST00000420813 FBXL2Q9UKC9 423 aa15.76■□□□□ 0.11
MSH6-203ENST00000420813 PLEKHA6Q9Y2H5 1048 aa15.76■□□□□ 0.11
MSH6-203ENST00000420813 ZNF469Q96JG9 3925 aaPredicted RBP15.76■□□□□ 0.11
MSH6-203ENST00000420813 FLNAP21333 2647 aaKnown RBP15.75■□□□□ 0.11
MSH6-203ENST00000420813 CLCA1A8K7I4 914 aa15.75■□□□□ 0.11
MSH6-203ENST00000420813 H3BQF6 201 aa15.75■□□□□ 0.11
MSH6-203ENST00000420813 COQ9O75208 318 aa15.75■□□□□ 0.11
MSH6-203ENST00000420813 ANXA4P09525 319 aaPredicted RBP15.75■□□□□ 0.11
MSH6-203ENST00000420813 ZNF708P17019 499 aa15.75■□□□□ 0.11
MSH6-203ENST00000420813 DDCP20711 480 aa15.75■□□□□ 0.11
MSH6-203ENST00000420813 GRK2P25098 689 aa15.75■□□□□ 0.11
MSH6-203ENST00000420813 LHX2P50458 406 aa15.75■□□□□ 0.11
MSH6-203ENST00000420813 GAS1P54826 345 aa15.75■□□□□ 0.11
MSH6-203ENST00000420813 NAA20P61599 178 aa15.75■□□□□ 0.11
MSH6-203ENST00000420813 ZNF763Q0D2J5 394 aa15.75■□□□□ 0.11
MSH6-203ENST00000420813 FOXF2Q12947 444 aa15.75■□□□□ 0.11
MSH6-203ENST00000420813 GAB1Q13480 694 aa15.75■□□□□ 0.11
MSH6-203ENST00000420813 IFT20Q8IY31 132 aa15.75■□□□□ 0.11
MSH6-203ENST00000420813 OR7G2Q8NG99 324 aa15.75■□□□□ 0.11
MSH6-203ENST00000420813 SFXN2Q96NB2 322 aa15.75■□□□□ 0.11
MSH6-203ENST00000420813 BBS4Q96RK4 519 aa15.75■□□□□ 0.11
MSH6-203ENST00000420813 G6PC3Q9BUM1 346 aa15.75■□□□□ 0.11
MSH6-203ENST00000420813 EBPLQ9BY08 206 aa15.75■□□□□ 0.11
MSH6-203ENST00000420813 PIGMQ9H3S5 423 aa15.75■□□□□ 0.11
MSH6-203ENST00000420813 GSTO2Q9H4Y5 243 aa15.75■□□□□ 0.11
MSH6-203ENST00000420813 PSMC3IPQ9P2W1 217 aaPredicted RBP15.75■□□□□ 0.11
MSH6-203ENST00000420813 DCDC2Q9UHG0 476 aa15.75■□□□□ 0.11
MSH6-203ENST00000420813 DKKL1Q9UK85 242 aa15.75■□□□□ 0.11
MSH6-203ENST00000420813 GRID1Q9ULK0 1009 aa15.75■□□□□ 0.11
MSH6-203ENST00000420813 TIMM22Q9Y584 194 aa15.75■□□□□ 0.11
MSH6-203ENST00000420813 A0A087WV62 115 aa15.74■□□□□ 0.11
MSH6-203ENST00000420813 MYO1GB0I1T2 1018 aa15.74■□□□□ 0.11
MSH6-203ENST00000420813 GOLGA8RI6L899 631 aa15.74■□□□□ 0.11
MSH6-203ENST00000420813 PLOD2O00469 737 aa15.74■□□□□ 0.11
MSH6-203ENST00000420813 HCRTR2O43614 444 aa15.74■□□□□ 0.11
MSH6-203ENST00000420813 CLDN18P56856 261 aa15.74■□□□□ 0.11
MSH6-203ENST00000420813 PPP2R2AP63151 447 aa15.74■□□□□ 0.11
MSH6-203ENST00000420813 PSG6Q00889 435 aa15.74■□□□□ 0.11
MSH6-203ENST00000420813 SRYQ05066 204 aa15.74■□□□□ 0.11
MSH6-203ENST00000420813 BCL2A1Q16548 175 aa15.74■□□□□ 0.11
MSH6-203ENST00000420813 FBXW10Q5XX13 1052 aa15.74■□□□□ 0.11
MSH6-203ENST00000420813 SLC44A2Q8IWA5 706 aaPredicted RBP15.74■□□□□ 0.11
MSH6-203ENST00000420813 LINC01560Q8TB33 94 aa15.74■□□□□ 0.11
MSH6-203ENST00000420813 MZB1Q8WU39 189 aa15.74■□□□□ 0.11
MSH6-203ENST00000420813 DACH2Q96NX9 599 aa15.74■□□□□ 0.11
MSH6-203ENST00000420813 KCNA7Q96RP8 456 aa15.74■□□□□ 0.11
MSH6-203ENST00000420813 RBM24Q9BX46 236 aaKnown RBP15.74■□□□□ 0.11
MSH6-203ENST00000420813 MID1IP1Q9NPA3 183 aa15.74■□□□□ 0.11
MSH6-203ENST00000420813 TAS2R7Q9NYW3 318 aa15.74■□□□□ 0.11
MSH6-203ENST00000420813 WBP11Q9Y2W2 641 aaKnown RBP15.74■□□□□ 0.11
MSH6-203ENST00000420813 OR10H1Q9Y4A9 318 aa15.74■□□□□ 0.11
MSH6-203ENST00000420813 KIF2AO00139 706 aaPredicted RBP15.73■□□□□ 0.11
MSH6-203ENST00000420813 ZIC3O60481 467 aa15.73■□□□□ 0.11
MSH6-203ENST00000420813 NME6O75414 186 aaPredicted RBP15.73■□□□□ 0.11
MSH6-203ENST00000420813 RAF1P04049 648 aa15.73■□□□□ 0.11
MSH6-203ENST00000420813 PYGBP11216 843 aa15.73■□□□□ 0.11
MSH6-203ENST00000420813 KLK2P20151 261 aa15.73■□□□□ 0.11
MSH6-203ENST00000420813 DPP4P27487 766 aa15.73■□□□□ 0.11
MSH6-203ENST00000420813 EVI2BP34910 448 aa15.73■□□□□ 0.11
MSH6-203ENST00000420813 STARP49675 285 aa15.73■□□□□ 0.11
MSH6-203ENST00000420813 DSCR4P56555 118 aaPredicted RBP15.73■□□□□ 0.11
MSH6-203ENST00000420813 BTKQ06187 659 aa15.73■□□□□ 0.11
MSH6-203ENST00000420813 C2orf80Q0P641 193 aa15.73■□□□□ 0.11
MSH6-203ENST00000420813 ZNF155Q12901 538 aaPredicted RBP15.73■□□□□ 0.11
MSH6-203ENST00000420813 KRTAP21-3Q3LHN1 58 aa15.73■□□□□ 0.11
MSH6-203ENST00000420813 GRAMD2AQ8IUY3 354 aa15.73■□□□□ 0.11
MSH6-203ENST00000420813 CEP112Q8N8E3 955 aa15.73■□□□□ 0.11
MSH6-203ENST00000420813 OR4K17Q8NGC6 315 aa15.73■□□□□ 0.11
MSH6-203ENST00000420813 FAM76AQ8TAV0 307 aa15.73■□□□□ 0.11
MSH6-203ENST00000420813 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.73■□□□□ 0.119e-20■■■■□ 21.7
MSH6-203ENST00000420813 EFHD2Q96C19 240 aaPredicted RBP15.73■□□□□ 0.11
MSH6-203ENST00000420813 INTS12Q96CB8 462 aaKnown RBP15.73■□□□□ 0.11
MSH6-203ENST00000420813 MYNNQ9NPC7 610 aa15.73■□□□□ 0.11
MSH6-203ENST00000420813 MIEF1Q9NQG6 463 aa15.73■□□□□ 0.11
MSH6-203ENST00000420813 GALNT8Q9NY28 637 aa15.73■□□□□ 0.11
MSH6-203ENST00000420813 ABCG2Q9UNQ0 655 aa15.73■□□□□ 0.11
MSH6-203ENST00000420813 B4DXG7 233 aa15.72■□□□□ 0.11
MSH6-203ENST00000420813 UBFD1O14562 309 aaKnown RBP15.72■□□□□ 0.11
MSH6-203ENST00000420813 GLRA3O75311 464 aa15.72■□□□□ 0.11
MSH6-203ENST00000420813 CRHP06850 196 aa15.72■□□□□ 0.11
MSH6-203ENST00000420813 IFI6P09912 130 aa15.72■□□□□ 0.11
MSH6-203ENST00000420813 CPA2P48052 419 aa15.72■□□□□ 0.11
MSH6-203ENST00000420813 NCBP2P52298 156 aaKnown RBP eCLIP15.72■□□□□ 0.11
MSH6-203ENST00000420813 DIO3P55073 304 aa15.72■□□□□ 0.11
MSH6-203ENST00000420813 FOXA1P55317 472 aa15.72■□□□□ 0.11
MSH6-203ENST00000420813 SLC29A2Q14542 456 aa15.72■□□□□ 0.11
MSH6-203ENST00000420813 GANABQ14697 944 aaKnown RBP15.72■□□□□ 0.11
MSH6-203ENST00000420813 IMPG1Q17R60 797 aa15.72■□□□□ 0.11
MSH6-203ENST00000420813 CYP27C1Q4G0S4 372 aa15.72■□□□□ 0.11
MSH6-203ENST00000420813 SPDYAQ5MJ70 313 aa15.72■□□□□ 0.11
MSH6-203ENST00000420813 OR5M10Q6IEU7 315 aa15.72■□□□□ 0.11
MSH6-203ENST00000420813 FAM71E1Q6IPT2 247 aa15.72■□□□□ 0.11
MSH6-203ENST00000420813 ZYG11AQ6WRX3 759 aa15.72■□□□□ 0.11
MSH6-203ENST00000420813 TRIM46Q7Z4K8 759 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms