RNA–Protein interactions for RNA: ENST00000420522.1

LINC01646-201, Transcript of long intergenic non-protein coding RNA 1646, humanhuman

TSL 3 BASIC

Gene LINC01646, Length 682 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01646-201ENST00000420522 LIN28AQ9H9Z2 209 aaKnown RBP3.3□□□□□ -1.88
LINC01646-201ENST00000420522 DUS2Q9NX74 493 aaKnown RBP3.3□□□□□ -1.88
LINC01646-201ENST00000420522 SENP1Q9P0U3 644 aa3.3□□□□□ -1.88
LINC01646-201ENST00000420522 DHRS4-AS1Q9P1J3 65 aa3.3□□□□□ -1.88
LINC01646-201ENST00000420522 ARMCX1Q9P291 453 aa3.3□□□□□ -1.88
LINC01646-201ENST00000420522 U3KQV3 271 aa3.3□□□□□ -1.88
LINC01646-201ENST00000420522 UNC13AQ9UPW8 1703 aa3.3□□□□□ -1.88
LINC01646-201ENST00000420522 PCF11O94913 1555 aaKnown RBP3.29□□□□□ -1.88
LINC01646-201ENST00000420522 TRAV9-2A0A087WT02 112 aa3.29□□□□□ -1.88
LINC01646-201ENST00000420522 A0A087WZY1 265 aa3.29□□□□□ -1.88
LINC01646-201ENST00000420522 ZNF840PA6NDX5 716 aa3.29□□□□□ -1.88
LINC01646-201ENST00000420522 E9PAM4 449 aa3.29□□□□□ -1.88
LINC01646-201ENST00000420522 K7EPI3 171 aa3.29□□□□□ -1.88
LINC01646-201ENST00000420522 CLDN3O15551 220 aa3.29□□□□□ -1.88
LINC01646-201ENST00000420522 LANCL1O43813 399 aa3.29□□□□□ -1.88
LINC01646-201ENST00000420522 GPRIN2O60269 458 aa3.29□□□□□ -1.88
LINC01646-201ENST00000420522 SRPX2O60687 465 aaPredicted RBP3.29□□□□□ -1.88
LINC01646-201ENST00000420522 ZNF253O75346 499 aa3.29□□□□□ -1.88
LINC01646-201ENST00000420522 DIRAS3O95661 229 aa3.29□□□□□ -1.88
LINC01646-201ENST00000420522 PIGRP01833 764 aa3.29□□□□□ -1.88
LINC01646-201ENST00000420522 CA3P07451 260 aa3.29□□□□□ -1.88
LINC01646-201ENST00000420522 ANXA4P09525 319 aaPredicted RBP3.29□□□□□ -1.88
LINC01646-201ENST00000420522 AXLP30530 894 aa3.29□□□□□ -1.88
LINC01646-201ENST00000420522 ADRA1AP35348 466 aa3.29□□□□□ -1.88
LINC01646-201ENST00000420522 RPL34P49207 117 aaKnown RBP3.29□□□□□ -1.88
LINC01646-201ENST00000420522 HMGCS2P54868 508 aa3.29□□□□□ -1.88
LINC01646-201ENST00000420522 POLR2FP61218 127 aaKnown RBP3.29□□□□□ -1.88
LINC01646-201ENST00000420522 LMO4P61968 165 aa3.29□□□□□ -1.88
LINC01646-201ENST00000420522 PRKCEQ02156 737 aa3.29□□□□□ -1.88
LINC01646-201ENST00000420522 EXOSC2Q13868 293 aaKnown RBP3.29□□□□□ -1.88
LINC01646-201ENST00000420522 PPP1R3AQ16821 1122 aa3.29□□□□□ -1.88
LINC01646-201ENST00000420522 MICAQ29983 383 aa3.29□□□□□ -1.88
LINC01646-201ENST00000420522 EIPR1Q53HC9 387 aa3.29□□□□□ -1.88
LINC01646-201ENST00000420522 Q7L0L9 218 aa3.29□□□□□ -1.88
LINC01646-201ENST00000420522 CEACAM19Q7Z692 300 aa3.29□□□□□ -1.88
LINC01646-201ENST00000420522 CBWD2Q8IUF1 395 aa3.29□□□□□ -1.88
LINC01646-201ENST00000420522 ZBTB44Q8NCP5 570 aa3.29□□□□□ -1.88
LINC01646-201ENST00000420522 ZBED6CLQ96FA7 236 aaPredicted RBP3.29□□□□□ -1.88
LINC01646-201ENST00000420522 C16orf45Q96MC5 204 aaPredicted RBP3.29□□□□□ -1.88
LINC01646-201ENST00000420522 ATP6V1HQ9UI12 483 aa3.29□□□□□ -1.88
LINC01646-201ENST00000420522 PKD1L2Q7Z442 2459 aa3.29□□□□□ -1.88
LINC01646-201ENST00000420522 SNAPC4Q5SXM2 1469 aa3.28□□□□□ -1.88
LINC01646-201ENST00000420522 PTPRTO14522 1441 aa3.28□□□□□ -1.88
LINC01646-201ENST00000420522 A0A087WWV3 80 aa3.28□□□□□ -1.88
LINC01646-201ENST00000420522 TRBV7-9A0A0J9YWB2 115 aa3.28□□□□□ -1.88
LINC01646-201ENST00000420522 A0A1B0GUL7 405 aa3.28□□□□□ -1.88
LINC01646-201ENST00000420522 TRIM49BA6NDI0 452 aa3.28□□□□□ -1.88
LINC01646-201ENST00000420522 WASH3PC4AMC7 463 aa3.28□□□□□ -1.88
LINC01646-201ENST00000420522 TM9SF1O15321 606 aa3.28□□□□□ -1.88
LINC01646-201ENST00000420522 SMPD2O60906 423 aa3.28□□□□□ -1.88
LINC01646-201ENST00000420522 AK1P00568 194 aa3.28□□□□□ -1.88
LINC01646-201ENST00000420522 IFNB1P01574 187 aa3.28□□□□□ -1.88
LINC01646-201ENST00000420522 PTMAP06454 111 aaKnown RBP3.28□□□□□ -1.88
LINC01646-201ENST00000420522 GSTT2P0CG29 244 aa3.28□□□□□ -1.88
LINC01646-201ENST00000420522 GSTT2BP0CG30 244 aa3.28□□□□□ -1.88
LINC01646-201ENST00000420522 PAICSP22234 425 aaKnown RBP3.28□□□□□ -1.88
LINC01646-201ENST00000420522 HMGCLP35914 325 aa3.28□□□□□ -1.88
LINC01646-201ENST00000420522 MDH1P40925 334 aaKnown RBP3.28□□□□□ -1.88
LINC01646-201ENST00000420522 METAP1P53582 386 aa3.28□□□□□ -1.88
LINC01646-201ENST00000420522 RAB35Q15286 201 aa3.28□□□□□ -1.88
LINC01646-201ENST00000420522 C15orf32Q32M92 178 aa3.28□□□□□ -1.88
LINC01646-201ENST00000420522 KRTAP27-1Q3LI81 207 aa3.28□□□□□ -1.88
LINC01646-201ENST00000420522 CYBRD1Q53TN4 286 aa3.28□□□□□ -1.88
LINC01646-201ENST00000420522 FBXL22Q6P050 247 aa3.28□□□□□ -1.88
LINC01646-201ENST00000420522 SLC39A4Q6P5W5 647 aa3.28□□□□□ -1.88
LINC01646-201ENST00000420522 BTNL3Q6UXE8 466 aa3.28□□□□□ -1.88
LINC01646-201ENST00000420522 WASH2PQ6VEQ5 465 aa3.28□□□□□ -1.88
LINC01646-201ENST00000420522 AGAP11Q8TF27 550 aa3.28□□□□□ -1.88
LINC01646-201ENST00000420522 ART4Q93070 314 aa3.28□□□□□ -1.88
LINC01646-201ENST00000420522 VSTM2LQ96N03 204 aa3.28□□□□□ -1.88
LINC01646-201ENST00000420522 MCCC1Q96RQ3 725 aaPredicted RBP3.28□□□□□ -1.88
LINC01646-201ENST00000420522 PYGO2Q9BRQ0 406 aa3.28□□□□□ -1.88
LINC01646-201ENST00000420522 LPAR2Q9HBW0 351 aa3.28□□□□□ -1.88
LINC01646-201ENST00000420522 FAM120CQ9NX05 1096 aaKnown RBP3.28□□□□□ -1.88
LINC01646-201ENST00000420522 IMPAD1Q9NX62 359 aa3.28□□□□□ -1.88
LINC01646-201ENST00000420522 ISY1Q9ULR0 285 aaKnown RBP3.28□□□□□ -1.88
LINC01646-201ENST00000420522 BARX2Q9UMQ3 279 aaPredicted RBP3.28□□□□□ -1.88
LINC01646-201ENST00000420522 NTNG1Q9Y2I2 539 aa3.28□□□□□ -1.88
LINC01646-201ENST00000420522 EXOSC1Q9Y3B2 195 aaKnown RBP3.28□□□□□ -1.88
LINC01646-201ENST00000420522 METP08581 1390 aa3.27□□□□□ -1.89
LINC01646-201ENST00000420522 GON4LQ3T8J9 2241 aa3.27□□□□□ -1.89
LINC01646-201ENST00000420522 GRIN2DO15399 1336 aa3.27□□□□□ -1.89
LINC01646-201ENST00000420522 NACADO15069 1562 aa3.27□□□□□ -1.89
LINC01646-201ENST00000420522 WASHC1A8K0Z3 465 aa3.27□□□□□ -1.89
LINC01646-201ENST00000420522 SAP18O00422 153 aaKnown RBP3.27□□□□□ -1.89
LINC01646-201ENST00000420522 BCL2L11O43521 198 aa3.27□□□□□ -1.89
LINC01646-201ENST00000420522 ZNF354AO60765 605 aaPredicted RBP3.27□□□□□ -1.89
LINC01646-201ENST00000420522 PRAMEF12O95522 483 aa3.27□□□□□ -1.89
LINC01646-201ENST00000420522 THRBP10828 461 aa3.27□□□□□ -1.89
LINC01646-201ENST00000420522 NCF1P14598 390 aaPredicted RBP3.27□□□□□ -1.89
LINC01646-201ENST00000420522 UQCRBP14927 111 aa3.27□□□□□ -1.89
LINC01646-201ENST00000420522 CYP2F1P24903 491 aa3.27□□□□□ -1.89
LINC01646-201ENST00000420522 PTGFRP43088 359 aa3.27□□□□□ -1.89
LINC01646-201ENST00000420522 OR1D4P47884 311 aa3.27□□□□□ -1.89
LINC01646-201ENST00000420522 DSCR10P59022 87 aa3.27□□□□□ -1.89
LINC01646-201ENST00000420522 RPS6P62753 249 aaKnown RBP3.27□□□□□ -1.89
LINC01646-201ENST00000420522 TFDP1Q14186 410 aa3.27□□□□□ -1.89
LINC01646-201ENST00000420522 HSP90AA5PQ58FG0 334 aa3.27□□□□□ -1.89
LINC01646-201ENST00000420522 RNLSQ5VYX0 342 aa3.27□□□□□ -1.89
LINC01646-201ENST00000420522 NIPAL3Q6P499 406 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms