RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 PAGE2BQ5JRK9 111 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 SAMD4BQ5PRF9 694 aaKnown RBP3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 LRIF1Q5T3J3 769 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 LCE3CQ5T5A8 94 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 ZNF772Q68DY9 489 aaPredicted RBP3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 ELP2Q6IA86 826 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 FAM109BQ6ICB4 259 aaPredicted RBP3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 JADE1Q6IE81 842 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 LCN10Q6JVE6 187 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 PRMT9Q6P2P2 845 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 ZYG11AQ6WRX3 759 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 ZNF852Q6ZMS4 543 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 TPRG1Q6ZUI0 275 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 GPRIN3Q6ZVF9 776 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 SMIM29Q86T20 159 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 TSPAN33Q86UF1 283 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 P2RY8Q86VZ1 359 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 PLD3Q8IV08 490 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 THNSL1Q8IYQ7 743 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 EID3Q8N140 333 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 PDIK1LQ8N165 341 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 LIX1Q8N485 282 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 STX19Q8N4C7 294 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 TBC1D19Q8N5T2 526 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 SLC5A8Q8N695 610 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 GCSAMQ8N6F7 178 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 C4orf32Q8N8J7 132 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 ZNF565Q8N9K5 539 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 TMEM35BQ8NCS4 154 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 BPIFB6Q8NFQ5 453 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 KBTBD8Q8NFY9 601 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 OR4D10Q8NGI6 311 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 OR52I2Q8NH67 350 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 MCFD2Q8NI22 146 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 ZNF564Q8TBZ8 553 aaPredicted RBP3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 ZFP90Q8TF47 636 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 SETD7Q8WTS6 366 aaKnown RBP3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 DCAKDQ8WVC6 231 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 TFB1MQ8WVM0 346 aaKnown RBP3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 C1orf54Q8WWF1 131 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 CYGBQ8WWM9 190 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 DEDD2Q8WXF8 326 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 SLC7A6Q92536 515 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 ELMO1Q92556 727 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 RPL3LQ92901 407 aaKnown RBP3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 TCEAL3Q969E4 200 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 RAD51AP1Q96B01 352 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 SGTBQ96EQ0 304 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 LINGO1Q96FE5 620 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 EEF2KMTQ96G04 330 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 MSANTD3Q96H12 275 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 VPS39Q96JC1 886 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 ST6GAL2Q96JF0 529 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 SLC45A3Q96JT2 553 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 RNF170Q96K19 258 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 HSFY1Q96LI6 401 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 CPXM1Q96SM3 734 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 AGPAT1Q99943 283 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 FAM213AQ9BRX8 229 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 TTYH2Q9BSA4 534 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 TRMT61BQ9BVS5 477 aaKnown RBP3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 FUNDC2Q9BWH2 189 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 ITPAQ9BY32 194 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 UCK2Q9BZX2 261 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 GPR88Q9GZN0 384 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 NYXQ9GZU5 481 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 NAA50Q9GZZ1 169 aaKnown RBP3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 LHX5Q9H2C1 402 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 PLK3Q9H4B4 646 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 WDR41Q9HAD4 459 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 SCRT2Q9NQ03 307 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 RGS18Q9NS28 235 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 ZFP57Q9NU63 452 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 HPF1Q9NWY4 346 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 DUS2Q9NX74 493 aaKnown RBP3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 SMPD3Q9NY59 655 aaPredicted RBP3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 TMEM216Q9P0N5 145 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 GCNT4Q9P109 453 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 NYAP2Q9P242 653 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 EXTL2Q9UBQ6 330 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 CYB5R1Q9UHQ9 305 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 BAIAP2Q9UQB8 552 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 TMEM184BQ9Y519 407 aaPredicted RBP3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 KIF13BQ9NQT8 1826 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 FAM205AQ6ZU69 1335 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 IGSF9BQ9UPX0 1349 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 LRP5O75197 1615 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 TNRQ92752 1358 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 PLCH1Q4KWH8 1693 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 MYH10P35580 1976 aa3.11□□□□□ -1.91
SDCBPP3-201ENST00000419629 RIC1Q4ADV7 1423 aa3.1□□□□□ -1.91
SDCBPP3-201ENST00000419629 NWD2Q9ULI1 1742 aa3.1□□□□□ -1.91
SDCBPP3-201ENST00000419629 IGLV5-45A0A087WSX0 123 aa3.1□□□□□ -1.91
SDCBPP3-201ENST00000419629 IGKV3D-20A0A0C4DH25 116 aa3.1□□□□□ -1.91
SDCBPP3-201ENST00000419629 A0A1B0GW55 424 aa3.1□□□□□ -1.91
SDCBPP3-201ENST00000419629 TCRBV3S1A0A5B6 114 aa3.1□□□□□ -1.91
SDCBPP3-201ENST00000419629 FAM170AA1A519 330 aa3.1□□□□□ -1.91
SDCBPP3-201ENST00000419629 CCDC182A6NF36 153 aa3.1□□□□□ -1.91
SDCBPP3-201ENST00000419629 ARGFXA6NJG6 315 aa3.1□□□□□ -1.91
SDCBPP3-201ENST00000419629 ZNF99A8MXY4 864 aaPredicted RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms