RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 GSTM5P46439 218 aa13.72□□□□□ -0.21
UBXN4-203ENST00000416538 AGFG1P52594 562 aaKnown RBP13.72□□□□□ -0.21
UBXN4-203ENST00000416538 GFRA1P56159 465 aa13.72□□□□□ -0.21
UBXN4-203ENST00000416538 VSNL1P62760 191 aa13.72□□□□□ -0.21
UBXN4-203ENST00000416538 Q6ZSR9 355 aa13.72□□□□□ -0.21
UBXN4-203ENST00000416538 LARP4Q71RC2 724 aaKnown RBP eCLIP13.72□□□□□ -0.21
UBXN4-203ENST00000416538 PLCZ1Q86YW0 608 aa13.72□□□□□ -0.21
UBXN4-203ENST00000416538 SLC44A2Q8IWA5 706 aaPredicted RBP13.72□□□□□ -0.21
UBXN4-203ENST00000416538 ZZZ3Q8IYH5 903 aa13.72□□□□□ -0.21
UBXN4-203ENST00000416538 SAMD14Q8IZD0 417 aaPredicted RBP13.72□□□□□ -0.21
UBXN4-203ENST00000416538 OR2L13Q8N349 312 aa13.72□□□□□ -0.21
UBXN4-203ENST00000416538 CCDC63Q8NA47 563 aa13.72□□□□□ -0.21
UBXN4-203ENST00000416538 MBD3L2Q8NHZ7 208 aaPredicted RBP13.72□□□□□ -0.21
UBXN4-203ENST00000416538 GFM2Q969S9 779 aaKnown RBP13.72□□□□□ -0.21
UBXN4-203ENST00000416538 APOPT1Q96IL0 206 aa13.72□□□□□ -0.21
UBXN4-203ENST00000416538 BBS4Q96RK4 519 aa13.72□□□□□ -0.21
UBXN4-203ENST00000416538 TRIB1Q96RU8 372 aa13.72□□□□□ -0.21
UBXN4-203ENST00000416538 TUBA1CQ9BQE3 449 aa13.72□□□□□ -0.21
UBXN4-203ENST00000416538 ZNF559Q9BR84 538 aa13.72□□□□□ -0.21
UBXN4-203ENST00000416538 MECRQ9BV79 373 aa13.72□□□□□ -0.21
UBXN4-203ENST00000416538 MIEF1Q9NQG6 463 aa13.72□□□□□ -0.21
UBXN4-203ENST00000416538 MKS1Q9NXB0 559 aa13.72□□□□□ -0.21
UBXN4-203ENST00000416538 TAS2R7Q9NYW3 318 aa13.72□□□□□ -0.21
UBXN4-203ENST00000416538 SLC17A7Q9P2U7 560 aa13.72□□□□□ -0.21
UBXN4-203ENST00000416538 GIMAP2Q9UG22 337 aa13.72□□□□□ -0.21
UBXN4-203ENST00000416538 C19orf53Q9UNZ5 99 aaPredicted RBP13.72□□□□□ -0.21
UBXN4-203ENST00000416538 FIS1Q9Y3D6 152 aa13.72□□□□□ -0.21
UBXN4-203ENST00000416538 A0A087WV62 115 aa13.71□□□□□ -0.21
UBXN4-203ENST00000416538 HSPB2A8KAH6 182 aa13.71□□□□□ -0.21
UBXN4-203ENST00000416538 SCO2O43819 266 aa13.71□□□□□ -0.21
UBXN4-203ENST00000416538 CRCPO75575 148 aa13.71□□□□□ -0.21
UBXN4-203ENST00000416538 BCAS2O75934 225 aaPredicted RBP13.71□□□□□ -0.21
UBXN4-203ENST00000416538 SDC1P18827 310 aa13.71□□□□□ -0.21
UBXN4-203ENST00000416538 GRK2P25098 689 aa13.71□□□□□ -0.21
UBXN4-203ENST00000416538 CCT5P48643 541 aa13.71□□□□□ -0.21
UBXN4-203ENST00000416538 STARP49675 285 aa13.71□□□□□ -0.21
UBXN4-203ENST00000416538 ASCL1P50553 236 aa13.71□□□□□ -0.21
UBXN4-203ENST00000416538 B3GALT5-AS1P59052 145 aa13.71□□□□□ -0.21
UBXN4-203ENST00000416538 FOXF2Q12947 444 aa13.71□□□□□ -0.21
UBXN4-203ENST00000416538 MYBPHQ13203 477 aa13.71□□□□□ -0.21
UBXN4-203ENST00000416538 HSPB2Q16082 182 aa13.71□□□□□ -0.21
UBXN4-203ENST00000416538 FBXL19-AS1Q494R0 122 aa13.71□□□□□ -0.21
UBXN4-203ENST00000416538 CFAP157Q5JU67 520 aa13.71□□□□□ -0.21
UBXN4-203ENST00000416538 KANK2Q63ZY3 851 aa13.71□□□□□ -0.21
UBXN4-203ENST00000416538 ARSKQ6UWY0 536 aa13.71□□□□□ -0.21
UBXN4-203ENST00000416538 ZNF551Q7Z340 670 aaPredicted RBP13.71□□□□□ -0.21
UBXN4-203ENST00000416538 ADGRE4PQ86SQ3 457 aa13.71□□□□□ -0.21
UBXN4-203ENST00000416538 TRABD2AQ86V40 505 aa13.71□□□□□ -0.21
UBXN4-203ENST00000416538 PM20D2Q8IYS1 436 aa13.71□□□□□ -0.21
UBXN4-203ENST00000416538 CLYBLQ8N0X4 340 aa13.71□□□□□ -0.21
UBXN4-203ENST00000416538 BANPQ8N9N5 519 aa13.71□□□□□ -0.21
UBXN4-203ENST00000416538 CIDECQ96AQ7 238 aaPredicted RBP13.71□□□□□ -0.21
UBXN4-203ENST00000416538 PPCSQ9HAB8 311 aa13.71□□□□□ -0.21
UBXN4-203ENST00000416538 CRIM1Q9NZV1 1036 aa13.71□□□□□ -0.21
UBXN4-203ENST00000416538 SENP1Q9P0U3 644 aa13.71□□□□□ -0.21
UBXN4-203ENST00000416538 C2CD3Q4AC94 2353 aa13.7□□□□□ -0.22
UBXN4-203ENST00000416538 PLOD2O00469 737 aa13.7□□□□□ -0.22
UBXN4-203ENST00000416538 AZIN1O14977 448 aa13.7□□□□□ -0.22
UBXN4-203ENST00000416538 ZIC3O60481 467 aa13.7□□□□□ -0.22
UBXN4-203ENST00000416538 COQ9O75208 318 aa13.7□□□□□ -0.22
UBXN4-203ENST00000416538 ACTL6AO96019 429 aa13.7□□□□□ -0.22
UBXN4-203ENST00000416538 IGKV1D-16P01601 117 aa13.7□□□□□ -0.22
UBXN4-203ENST00000416538 CREB1P16220 341 aa13.7□□□□□ -0.22
UBXN4-203ENST00000416538 CAPN3P20807 821 aa13.7□□□□□ -0.22
UBXN4-203ENST00000416538 IL12BP29460 328 aa13.7□□□□□ -0.22
UBXN4-203ENST00000416538 ALDH3A1P30838 453 aa13.7□□□□□ -0.22
UBXN4-203ENST00000416538 SRD5A2P31213 254 aa13.7□□□□□ -0.22
UBXN4-203ENST00000416538 UQCRC1P31930 480 aa13.7□□□□□ -0.22
UBXN4-203ENST00000416538 EVI2BP34910 448 aa13.7□□□□□ -0.22
UBXN4-203ENST00000416538 MPIP34949 423 aa13.7□□□□□ -0.22
UBXN4-203ENST00000416538 LHX2P50458 406 aa13.7□□□□□ -0.22
UBXN4-203ENST00000416538 PNLIPRP2P54317 469 aa13.7□□□□□ -0.22
UBXN4-203ENST00000416538 CLDN18P56856 261 aa13.7□□□□□ -0.22
UBXN4-203ENST00000416538 NAA20P61599 178 aa13.7□□□□□ -0.22
UBXN4-203ENST00000416538 LSM11P83369 360 aaKnown RBP eCLIP13.7□□□□□ -0.22
UBXN4-203ENST00000416538 EFR3AQ14156 821 aa13.7□□□□□ -0.22
UBXN4-203ENST00000416538 SH2D4BQ5SQS7 431 aa13.7□□□□□ -0.22
UBXN4-203ENST00000416538 IKBIPQ70UQ0 350 aa13.7□□□□□ -0.22
UBXN4-203ENST00000416538 TMEM200AQ86VY9 491 aa13.7□□□□□ -0.22
UBXN4-203ENST00000416538 TRIM42Q8IWZ5 723 aa13.7□□□□□ -0.22
UBXN4-203ENST00000416538 FADS6Q8N9I5 356 aa13.7□□□□□ -0.22
UBXN4-203ENST00000416538 OR14L1PQ8NHC6 308 aa13.7□□□□□ -0.22
UBXN4-203ENST00000416538 CLHC1Q8NHS4 586 aa13.7□□□□□ -0.22
UBXN4-203ENST00000416538 FAM76AQ8TAV0 307 aa13.7□□□□□ -0.22
UBXN4-203ENST00000416538 TMCO6Q96DC7 493 aa13.7□□□□□ -0.22
UBXN4-203ENST00000416538 ELP4Q96EB1 424 aa13.7□□□□□ -0.22
UBXN4-203ENST00000416538 STMN4Q9H169 189 aaPredicted RBP13.7□□□□□ -0.22
UBXN4-203ENST00000416538 LRTM1Q9HBL6 345 aa13.7□□□□□ -0.22
UBXN4-203ENST00000416538 RRAGDQ9NQL2 400 aaPredicted RBP13.7□□□□□ -0.22
UBXN4-203ENST00000416538 TAS2R10Q9NYW0 307 aa13.7□□□□□ -0.22
UBXN4-203ENST00000416538 TAS2R9Q9NYW1 312 aa13.7□□□□□ -0.22
UBXN4-203ENST00000416538 CLCF1Q9UBD9 225 aa13.7□□□□□ -0.22
UBXN4-203ENST00000416538 DNAJC15Q9Y5T4 150 aa13.7□□□□□ -0.22
UBXN4-203ENST00000416538 GXYLT2A0PJZ3 443 aa13.69□□□□□ -0.22
UBXN4-203ENST00000416538 CLCA1A8K7I4 914 aa13.69□□□□□ -0.22
UBXN4-203ENST00000416538 FAM47E-STBD1D6RA91 191 aa13.69□□□□□ -0.22
UBXN4-203ENST00000416538 H3BQF6 201 aa13.69□□□□□ -0.22
UBXN4-203ENST00000416538 DVL2O14641 736 aa13.69□□□□□ -0.22
UBXN4-203ENST00000416538 LSM1O15116 133 aaKnown RBP13.69□□□□□ -0.22
UBXN4-203ENST00000416538 FADS1O60427 444 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms