RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 PIGQQ9BRB3 760 aa13.88□□□□□ -0.19
DDX56-202ENST00000415758 REPIN1Q9BWE0 567 aaKnown RBP13.88□□□□□ -0.19
DDX56-202ENST00000415758 DPH5Q9H2P9 285 aa13.88□□□□□ -0.19
DDX56-202ENST00000415758 CPSF2Q9P2I0 782 aaKnown RBP13.88□□□□□ -0.19
DDX56-202ENST00000415758 ZNF780BQ9Y6R6 833 aa13.88□□□□□ -0.19
DDX56-202ENST00000415758 USF3Q68DE3 2245 aa13.88□□□□□ -0.19
DDX56-202ENST00000415758 A0A096LPK6 155 aa13.87□□□□□ -0.19
DDX56-202ENST00000415758 LINC01387J3KSC0 135 aa13.87□□□□□ -0.19
DDX56-202ENST00000415758 ARL1P40616 181 aaPredicted RBP13.87□□□□□ -0.19
DDX56-202ENST00000415758 MAGEA4P43358 317 aa13.87□□□□□ -0.19
DDX56-202ENST00000415758 MRPS25P82663 173 aaKnown RBP13.87□□□□□ -0.19
DDX56-202ENST00000415758 GUCY2DQ02846 1103 aa13.87□□□□□ -0.19
DDX56-202ENST00000415758 CAPRIN1Q14444 709 aaKnown RBP13.87□□□□□ -0.19
DDX56-202ENST00000415758 ZNF628Q5EBL2 1059 aa13.87□□□□□ -0.19
DDX56-202ENST00000415758 TECRLQ5HYJ1 363 aa13.87□□□□□ -0.19
DDX56-202ENST00000415758 SH2D5Q6ZV89 423 aa13.87□□□□□ -0.19
DDX56-202ENST00000415758 ZNF550Q7Z398 422 aa13.87□□□□□ -0.19
DDX56-202ENST00000415758 MEIOBQ8N635 442 aa13.87□□□□□ -0.19
DDX56-202ENST00000415758 FADS6Q8N9I5 356 aa13.87□□□□□ -0.19
DDX56-202ENST00000415758 ZNF610Q8N9Z0 462 aa13.87□□□□□ -0.19
DDX56-202ENST00000415758 FIG4Q92562 907 aa13.87□□□□□ -0.19
DDX56-202ENST00000415758 VSTM2LQ96N03 204 aa13.87□□□□□ -0.19
DDX56-202ENST00000415758 FAIM2Q9BWQ8 316 aa13.87□□□□□ -0.19
DDX56-202ENST00000415758 BRF2Q9HAW0 419 aa13.87□□□□□ -0.19
DDX56-202ENST00000415758 PCTPQ9UKL6 214 aa13.87□□□□□ -0.19
DDX56-202ENST00000415758 SLC12A4Q9UP95 1085 aa13.87□□□□□ -0.19
DDX56-202ENST00000415758 ZNF175Q9Y473 711 aa13.87□□□□□ -0.19
DDX56-202ENST00000415758 MXRA5Q9NR99 2828 aa13.87□□□□□ -0.19
DDX56-202ENST00000415758 SONP18583 2426 aaKnown RBP13.86□□□□□ -0.19
DDX56-202ENST00000415758 PCNX3Q9H6A9 2034 aa13.86□□□□□ -0.19
DDX56-202ENST00000415758 STX16-NPEPL1H3BU86 382 aa13.86□□□□□ -0.19
DDX56-202ENST00000415758 STX16O14662 325 aa13.86□□□□□ -0.19
DDX56-202ENST00000415758 KLF4O43474 513 aa13.86□□□□□ -0.19
DDX56-202ENST00000415758 SOX30O94993 753 aa13.86□□□□□ -0.19
DDX56-202ENST00000415758 TBXA2RP21731 343 aa13.86□□□□□ -0.19
DDX56-202ENST00000415758 KCNJ5P48544 419 aa13.86□□□□□ -0.19
DDX56-202ENST00000415758 SUCLG1P53597 346 aaKnown RBP13.86□□□□□ -0.19
DDX56-202ENST00000415758 CORO7P57737 925 aa13.86□□□□□ -0.19
DDX56-202ENST00000415758 MRPS22P82650 360 aaKnown RBP13.86□□□□□ -0.19
DDX56-202ENST00000415758 FAM180BQ6P0A1 224 aa13.86□□□□□ -0.19
DDX56-202ENST00000415758 LARP4Q71RC2 724 aaKnown RBP eCLIP13.86□□□□□ -0.19
DDX56-202ENST00000415758 MILR1Q7Z6M3 343 aa13.86□□□□□ -0.19
DDX56-202ENST00000415758 UBQLNLQ8IYU4 475 aa13.86□□□□□ -0.19
DDX56-202ENST00000415758 CCDC116Q8IYX3 515 aa13.86□□□□□ -0.19
DDX56-202ENST00000415758 PTGR2Q8N8N7 351 aaPredicted RBP13.86□□□□□ -0.19
DDX56-202ENST00000415758 OR4F6Q8NGB9 312 aa13.86□□□□□ -0.19
DDX56-202ENST00000415758 ZC3HAV1LQ96H79 300 aaKnown RBP13.86□□□□□ -0.19
DDX56-202ENST00000415758 NAPGQ99747 312 aaPredicted RBP13.86□□□□□ -0.19
DDX56-202ENST00000415758 ELOVL6Q9H5J4 265 aa13.86□□□□□ -0.19
DDX56-202ENST00000415758 UTS2RQ9UKP6 389 aa13.86□□□□□ -0.19
DDX56-202ENST00000415758 TMCO1Q9UM00 188 aa13.86□□□□□ -0.19
DDX56-202ENST00000415758 ZNF337Q9Y3M9 751 aa13.86□□□□□ -0.19
DDX56-202ENST00000415758 PDYNP01213 254 aa13.85□□□□□ -0.19
DDX56-202ENST00000415758 ALDOAP04075 364 aaKnown RBP13.85□□□□□ -0.19
DDX56-202ENST00000415758 THBDP07204 575 aa13.85□□□□□ -0.19
DDX56-202ENST00000415758 PPP3CBP16298 524 aa13.85□□□□□ -0.19
DDX56-202ENST00000415758 IL12BP29460 328 aa13.85□□□□□ -0.19
DDX56-202ENST00000415758 KRT20P35900 424 aa13.85□□□□□ -0.19
DDX56-202ENST00000415758 SIRPAP78324 504 aa13.85□□□□□ -0.19
DDX56-202ENST00000415758 CAV1Q03135 178 aa13.85□□□□□ -0.19
DDX56-202ENST00000415758 KRTAP1-1Q07627 177 aa13.85□□□□□ -0.19
DDX56-202ENST00000415758 GANABQ14697 944 aaKnown RBP13.85□□□□□ -0.19
DDX56-202ENST00000415758 BEX5Q5H9J7 111 aa13.85□□□□□ -0.19
DDX56-202ENST00000415758 NPSR1Q6W5P4 371 aa13.85□□□□□ -0.19
DDX56-202ENST00000415758 FAM214BQ7L5A3 538 aa13.85□□□□□ -0.19
DDX56-202ENST00000415758 SAMD14Q8IZD0 417 aaPredicted RBP13.85□□□□□ -0.19
DDX56-202ENST00000415758 OR2M3Q8NG83 312 aa13.85□□□□□ -0.19
DDX56-202ENST00000415758 OR4K17Q8NGC6 315 aa13.85□□□□□ -0.19
DDX56-202ENST00000415758 FNDC9Q8TBE3 224 aa13.85□□□□□ -0.19
DDX56-202ENST00000415758 FBXO25Q8TCJ0 367 aa13.85□□□□□ -0.19
DDX56-202ENST00000415758 TMEM171Q8WVE6 324 aa13.85□□□□□ -0.19
DDX56-202ENST00000415758 PHF21BQ96EK2 531 aa13.85□□□□□ -0.19
DDX56-202ENST00000415758 NSUN5Q96P11 429 aaKnown RBP13.85□□□□□ -0.19
DDX56-202ENST00000415758 PINK1Q9BXM7 581 aa13.85□□□□□ -0.19
DDX56-202ENST00000415758 CXorf56Q9H5V9 222 aa13.85□□□□□ -0.19
DDX56-202ENST00000415758 ANKRA2Q9H9E1 313 aa13.85□□□□□ -0.19
DDX56-202ENST00000415758 PLSCR4Q9NRQ2 329 aa13.85□□□□□ -0.19
DDX56-202ENST00000415758 FARSBQ9NSD9 589 aaKnown RBP13.85□□□□□ -0.19
DDX56-202ENST00000415758 NMRK1Q9NWW6 199 aa13.85□□□□□ -0.19
DDX56-202ENST00000415758 PROCRQ9UNN8 238 aa13.85□□□□□ -0.19
DDX56-202ENST00000415758 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.84□□□□□ -0.19
DDX56-202ENST00000415758 H0YC42 278 aa13.84□□□□□ -0.19
DDX56-202ENST00000415758 RAD51CO43502 376 aa13.84□□□□□ -0.19
DDX56-202ENST00000415758 FADS1O60427 444 aa13.84□□□□□ -0.19
DDX56-202ENST00000415758 PLOD3O60568 738 aa13.84□□□□□ -0.19
DDX56-202ENST00000415758 RBP1P09455 135 aa13.84□□□□□ -0.19
DDX56-202ENST00000415758 CTAGE8P0CG41 777 aa13.84□□□□□ -0.19
DDX56-202ENST00000415758 IL11P20809 199 aa13.84□□□□□ -0.19
DDX56-202ENST00000415758 TYK2P29597 1187 aa13.84□□□□□ -0.19
DDX56-202ENST00000415758 EVI2BP34910 448 aa13.84□□□□□ -0.19
DDX56-202ENST00000415758 ALDH9A1P49189 494 aa13.84□□□□□ -0.19
DDX56-202ENST00000415758 NR1H2P55055 460 aa13.84□□□□□ -0.19
DDX56-202ENST00000415758 PLTPP55058 493 aa13.84□□□□□ -0.19
DDX56-202ENST00000415758 TPD52P55327 224 aaPredicted RBP13.84□□□□□ -0.19
DDX56-202ENST00000415758 GNG11P61952 73 aa13.84□□□□□ -0.19
DDX56-202ENST00000415758 GLYR1Q49A26 553 aaPredicted RBP13.84□□□□□ -0.19
DDX56-202ENST00000415758 SGO1Q5FBB7 561 aa13.84□□□□□ -0.19
DDX56-202ENST00000415758 HEPHL1Q6MZM0 1159 aa13.84□□□□□ -0.19
DDX56-202ENST00000415758 CTAGE4Q8IX94 777 aa13.84□□□□□ -0.19
DDX56-202ENST00000415758 PLD6Q8N2A8 252 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms