RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 NKX2-4Q9H2Z4 354 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 METTL17Q9H7H0 456 aaPredicted RBP7.41□□□□□ -1.22
SIK3-203ENST00000415541 ENAMQ9NRM1 1142 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 TAS2R16Q9NYV7 291 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 PLEKHA6Q9Y2H5 1048 aa7.41□□□□□ -1.22
SIK3-203ENST00000415541 RPL36Q9Y3U8 105 aaKnown RBP7.41□□□□□ -1.22
SIK3-203ENST00000415541 DNAH12Q6ZR08 3092 aa7.4□□□□□ -1.22
SIK3-203ENST00000415541 C1orf196B1AJZ1 125 aa7.4□□□□□ -1.22
SIK3-203ENST00000415541 PHYHO14832 338 aa7.4□□□□□ -1.22
SIK3-203ENST00000415541 KIAA0355O15063 1070 aa7.4□□□□□ -1.22
SIK3-203ENST00000415541 IGLV3-25P01717 112 aa7.4□□□□□ -1.22
SIK3-203ENST00000415541 SPI1P17947 270 aa7.4□□□□□ -1.22
SIK3-203ENST00000415541 HOXD9P28356 352 aaPredicted RBP7.4□□□□□ -1.22
SIK3-203ENST00000415541 GMFBP60983 142 aa7.4□□□□□ -1.22
SIK3-203ENST00000415541 TNFRSF17Q02223 184 aa7.4□□□□□ -1.22
SIK3-203ENST00000415541 PON3Q15166 354 aa7.4□□□□□ -1.22
SIK3-203ENST00000415541 PLA1AQ53H76 456 aa7.4□□□□□ -1.22
SIK3-203ENST00000415541 LIPKQ5VXJ0 399 aa7.4□□□□□ -1.22
SIK3-203ENST00000415541 GDPD4Q6W3E5 623 aa7.4□□□□□ -1.22
SIK3-203ENST00000415541 LNX2Q8N448 690 aa7.4□□□□□ -1.22
SIK3-203ENST00000415541 LIX1Q8N485 282 aa7.4□□□□□ -1.22
SIK3-203ENST00000415541 C2orf73Q8N5S3 287 aaPredicted RBP7.4□□□□□ -1.22
SIK3-203ENST00000415541 CELF5Q8N6W0 485 aaKnown RBP7.4□□□□□ -1.22
SIK3-203ENST00000415541 PLA2G15Q8NCC3 412 aa7.4□□□□□ -1.22
SIK3-203ENST00000415541 PROKR2Q8NFJ6 384 aa7.4□□□□□ -1.22
SIK3-203ENST00000415541 RPLP0P6Q8NHW5 317 aa7.4□□□□□ -1.22
SIK3-203ENST00000415541 WFDC5Q8TCV5 224 aa7.4□□□□□ -1.22
SIK3-203ENST00000415541 CXorf40AQ8TE69 158 aa7.4□□□□□ -1.22
SIK3-203ENST00000415541 PIH1D2Q8WWB5 315 aa7.4□□□□□ -1.22
SIK3-203ENST00000415541 ACOT12Q8WYK0 555 aa7.4□□□□□ -1.22
SIK3-203ENST00000415541 MRPS24Q96EL2 167 aaKnown RBP7.4□□□□□ -1.22
SIK3-203ENST00000415541 THAP7Q9BT49 309 aaPredicted RBP7.4□□□□□ -1.22
SIK3-203ENST00000415541 VN1R3Q9BXE9 311 aa7.4□□□□□ -1.22
SIK3-203ENST00000415541 CFHR5Q9BXR6 569 aa7.4□□□□□ -1.22
SIK3-203ENST00000415541 ATG10Q9H0Y0 220 aa7.4□□□□□ -1.22
SIK3-203ENST00000415541 ZCCHC4Q9H5U6 513 aa7.4□□□□□ -1.22
SIK3-203ENST00000415541 STOX2Q9P2F5 926 aaPredicted RBP7.4□□□□□ -1.22
SIK3-203ENST00000415541 C17orf113A0A1B0GUU1 675 aa7.4□□□□□ -1.22
SIK3-203ENST00000415541 ZNF879B4DU55 563 aa7.4□□□□□ -1.22
SIK3-203ENST00000415541 PRKYO43930 277 aa7.4□□□□□ -1.22
SIK3-203ENST00000415541 TCRBP04435 133 aa7.4□□□□□ -1.22
SIK3-203ENST00000415541 NR2F6P10588 404 aa7.4□□□□□ -1.22
SIK3-203ENST00000415541 CD1DP15813 335 aa7.4□□□□□ -1.22
SIK3-203ENST00000415541 S100A11P31949 105 aa7.4□□□□□ -1.22
SIK3-203ENST00000415541 CDNFQ49AH0 187 aa7.4□□□□□ -1.22
SIK3-203ENST00000415541 FRMPD2BQ6IN97 320 aa7.4□□□□□ -1.22
SIK3-203ENST00000415541 PSAPL1Q6NUJ1 521 aa7.4□□□□□ -1.22
SIK3-203ENST00000415541 LRRN1Q6UXK5 716 aa7.4□□□□□ -1.22
SIK3-203ENST00000415541 NKAIN4Q8IVV8 208 aa7.4□□□□□ -1.22
SIK3-203ENST00000415541 GPR65Q8IYL9 337 aa7.4□□□□□ -1.22
SIK3-203ENST00000415541 PHACTR4Q8IZ21 702 aa7.4□□□□□ -1.22
SIK3-203ENST00000415541 CHST14Q8NCH0 376 aa7.4□□□□□ -1.22
SIK3-203ENST00000415541 SPPL3Q8TCT6 385 aa7.4□□□□□ -1.22
SIK3-203ENST00000415541 WBP1Q96G27 269 aa7.4□□□□□ -1.22
SIK3-203ENST00000415541 MOGAT1Q96PD6 335 aa7.4□□□□□ -1.22
SIK3-203ENST00000415541 SPATA5L1Q9BVQ7 753 aa7.4□□□□□ -1.22
SIK3-203ENST00000415541 CACNG6Q9BXT2 260 aa7.4□□□□□ -1.22
SIK3-203ENST00000415541 ZBP1Q9H171 429 aa7.4□□□□□ -1.22
SIK3-203ENST00000415541 SLC22A11Q9NSA0 550 aa7.4□□□□□ -1.22
SIK3-203ENST00000415541 ZNF226Q9NYT6 803 aa7.4□□□□□ -1.22
SIK3-203ENST00000415541 NFKBIL1Q9UBC1 381 aaPredicted RBP7.4□□□□□ -1.22
SIK3-203ENST00000415541 B4GALT6Q9UBX8 382 aa7.4□□□□□ -1.22
SIK3-203ENST00000415541 A0A1B0GWJ7 208 aa7.4□□□□□ -1.23
SIK3-203ENST00000415541 LINC01553A4QN01 128 aa7.4□□□□□ -1.23
SIK3-203ENST00000415541 ANXA2P2A6NMY6 339 aa7.4□□□□□ -1.23
SIK3-203ENST00000415541 DPM1O60762 260 aa7.4□□□□□ -1.23
SIK3-203ENST00000415541 PRAF2O60831 178 aa7.4□□□□□ -1.23
SIK3-203ENST00000415541 CLN5O75503 358 aa7.4□□□□□ -1.23
SIK3-203ENST00000415541 ITGA10O75578 1167 aa7.4□□□□□ -1.23
SIK3-203ENST00000415541 GADD45GO95257 159 aa7.4□□□□□ -1.23
SIK3-203ENST00000415541 ENGP17813 658 aa7.4□□□□□ -1.23
SIK3-203ENST00000415541 CXCL3P19876 107 aa7.4□□□□□ -1.23
SIK3-203ENST00000415541 MAT2AP31153 395 aaKnown RBP7.4□□□□□ -1.23
SIK3-203ENST00000415541 S100A3P33764 101 aa7.4□□□□□ -1.23
SIK3-203ENST00000415541 KCNJ3P48549 501 aa7.4□□□□□ -1.23
SIK3-203ENST00000415541 PXNP49023 591 aaPredicted RBP7.4□□□□□ -1.23
SIK3-203ENST00000415541 STC1P52823 247 aa7.4□□□□□ -1.23
SIK3-203ENST00000415541 NRG1Q02297 640 aaPredicted RBP7.4□□□□□ -1.23
SIK3-203ENST00000415541 OR7E24Q6IFN5 339 aa7.4□□□□□ -1.23
SIK3-203ENST00000415541 CERS6Q6ZMG9 384 aa7.4□□□□□ -1.23
SIK3-203ENST00000415541 PXT1Q8NFP0 134 aa7.4□□□□□ -1.23
SIK3-203ENST00000415541 THAP6Q8TBB0 222 aa7.4□□□□□ -1.23
SIK3-203ENST00000415541 C2CD4CQ8TF44 421 aa7.4□□□□□ -1.23
SIK3-203ENST00000415541 GTF3AQ92664 365 aaKnown RBP7.4□□□□□ -1.23
SIK3-203ENST00000415541 TPD52L3Q96J77 140 aa7.4□□□□□ -1.23
SIK3-203ENST00000415541 FEVQ99581 238 aa7.4□□□□□ -1.23
SIK3-203ENST00000415541 CMSS1Q9BQ75 279 aaKnown RBP7.4□□□□□ -1.23
SIK3-203ENST00000415541 KXD1Q9BQD3 176 aa7.4□□□□□ -1.23
SIK3-203ENST00000415541 CHIAQ9BZP6 476 aa7.4□□□□□ -1.23
SIK3-203ENST00000415541 RNF32Q9H0A6 362 aa7.4□□□□□ -1.23
SIK3-203ENST00000415541 KCNH6Q9H252 994 aa7.4□□□□□ -1.23
SIK3-203ENST00000415541 SLC25A32Q9H2D1 315 aa7.4□□□□□ -1.23
SIK3-203ENST00000415541 KLHL31Q9H511 634 aa7.4□□□□□ -1.23
SIK3-203ENST00000415541 PPP4R1LQ9P1A2 415 aa7.4□□□□□ -1.23
SIK3-203ENST00000415541 EXTL2Q9UBQ6 330 aa7.4□□□□□ -1.23
SIK3-203ENST00000415541 EIF2B4Q9UI10 523 aaKnown RBP7.4□□□□□ -1.23
SIK3-203ENST00000415541 ZSWIM8A7E2V4 1837 aa7.4□□□□□ -1.23
SIK3-203ENST00000415541 SHROOM3Q8TF72 1996 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 TRBV23-1A0A0A0MS06 115 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 C1QTNF3-AMACRE9PGA6 284 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms