RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 PRAMEF20Q5VT98 475 aa13.45□□□□□ -0.26
LIMS1-206ENST00000414829 CDC73Q6P1J9 531 aa13.45□□□□□ -0.26
LIMS1-206ENST00000414829 NPSR1Q6W5P4 371 aa13.45□□□□□ -0.26
LIMS1-206ENST00000414829 PRR22Q8IZ63 422 aa13.45□□□□□ -0.26
LIMS1-206ENST00000414829 FAM109AQ8N4B1 249 aa13.45□□□□□ -0.26
LIMS1-206ENST00000414829 CPSF7Q8N684 471 aaKnown RBP13.45□□□□□ -0.26
LIMS1-206ENST00000414829 SIMC1Q8NDZ2 872 aa13.45□□□□□ -0.26
LIMS1-206ENST00000414829 ADAMTS15Q8TE58 950 aa13.45□□□□□ -0.26
LIMS1-206ENST00000414829 CHMP6Q96FZ7 201 aa13.45□□□□□ -0.26
LIMS1-206ENST00000414829 GPR137Q96N19 417 aa13.45□□□□□ -0.26
LIMS1-206ENST00000414829 PANX1Q96RD7 426 aa13.45□□□□□ -0.26
LIMS1-206ENST00000414829 ANGPTL4Q9BY76 406 aa13.45□□□□□ -0.26
LIMS1-206ENST00000414829 CXorf36Q9H7Y0 433 aa13.45□□□□□ -0.26
LIMS1-206ENST00000414829 ZFP64Q9NPA5 681 aa13.45□□□□□ -0.26
LIMS1-206ENST00000414829 KLRF1Q9NZS2 232 aa13.45□□□□□ -0.26
LIMS1-206ENST00000414829 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.45□□□□□ -0.26
LIMS1-206ENST00000414829 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.44□□□□□ -0.26
LIMS1-206ENST00000414829 A0A0G2JND7 137 aa13.44□□□□□ -0.26
LIMS1-206ENST00000414829 RFXANKO14593 260 aa13.44□□□□□ -0.26
LIMS1-206ENST00000414829 TSPAN2O60636 221 aa13.44□□□□□ -0.26
LIMS1-206ENST00000414829 IL33O95760 270 aa13.44□□□□□ -0.26
LIMS1-206ENST00000414829 HMGN2P05204 90 aaKnown RBP13.44□□□□□ -0.26
LIMS1-206ENST00000414829 EFNA1P20827 205 aaPredicted RBP13.44□□□□□ -0.26
LIMS1-206ENST00000414829 ATP6V1C1P21283 382 aa13.44□□□□□ -0.26
LIMS1-206ENST00000414829 GABRA3P34903 492 aa13.44□□□□□ -0.26
LIMS1-206ENST00000414829 CHI3L1P36222 383 aaPredicted RBP13.44□□□□□ -0.26
LIMS1-206ENST00000414829 CASP3P42574 277 aa13.44□□□□□ -0.26
LIMS1-206ENST00000414829 TDGF1P3P51864 188 aa13.44□□□□□ -0.26
LIMS1-206ENST00000414829 POLR2JP52435 117 aaKnown RBP13.44□□□□□ -0.26
LIMS1-206ENST00000414829 NME5P56597 212 aa13.44□□□□□ -0.26
LIMS1-206ENST00000414829 WNT3P56703 355 aa13.44□□□□□ -0.26
LIMS1-206ENST00000414829 PMP22Q01453 160 aa13.44□□□□□ -0.26
LIMS1-206ENST00000414829 KCNC4Q03721 635 aa13.44□□□□□ -0.26
LIMS1-206ENST00000414829 RCAN2Q14206 197 aa13.44□□□□□ -0.26
LIMS1-206ENST00000414829 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.44□□□□□ -0.26
LIMS1-206ENST00000414829 GFRALQ6UXV0 394 aa13.44□□□□□ -0.26
LIMS1-206ENST00000414829 CLECL1Q8IZS7 167 aa13.44□□□□□ -0.26
LIMS1-206ENST00000414829 EID3Q8N140 333 aa13.44□□□□□ -0.26
LIMS1-206ENST00000414829 GOT1L1Q8NHS2 421 aaPredicted RBP13.44□□□□□ -0.26
LIMS1-206ENST00000414829 HGDQ93099 445 aa13.44□□□□□ -0.26
LIMS1-206ENST00000414829 GIMAP5Q96F15 307 aa13.44□□□□□ -0.26
LIMS1-206ENST00000414829 TMEM41AQ96HV5 264 aa13.44□□□□□ -0.26
LIMS1-206ENST00000414829 ITCHQ96J02 903 aa13.44□□□□□ -0.26
LIMS1-206ENST00000414829 ADOQ96SZ5 270 aa13.44□□□□□ -0.26
LIMS1-206ENST00000414829 BTBD2Q9BX70 525 aa13.44□□□□□ -0.26
LIMS1-206ENST00000414829 TTTY12Q9BZ98 90 aa13.44□□□□□ -0.26
LIMS1-206ENST00000414829 PIGUQ9H490 435 aa13.44□□□□□ -0.26
LIMS1-206ENST00000414829 SDHAF3Q9NRP4 125 aa13.44□□□□□ -0.26
LIMS1-206ENST00000414829 DEPPQ9NTK1 212 aa13.44□□□□□ -0.26
LIMS1-206ENST00000414829 FGFR1OP2Q9NVK5 253 aa13.44□□□□□ -0.26
LIMS1-206ENST00000414829 DCTN4Q9UJW0 460 aa13.44□□□□□ -0.26
LIMS1-206ENST00000414829 NPIPA5E9PKD4 350 aa13.43□□□□□ -0.26
LIMS1-206ENST00000414829 ASNA1O43681 348 aa13.43□□□□□ -0.26
LIMS1-206ENST00000414829 UGT2B11O75310 529 aa13.43□□□□□ -0.26
LIMS1-206ENST00000414829 GLSO94925 669 aaPredicted RBP13.43□□□□□ -0.26
LIMS1-206ENST00000414829 CBX6O95503 412 aa13.43□□□□□ -0.26
LIMS1-206ENST00000414829 NGFRP08138 427 aa13.43□□□□□ -0.26
LIMS1-206ENST00000414829 GCKP35557 465 aa13.43□□□□□ -0.26
LIMS1-206ENST00000414829 MAP3K8P41279 467 aa13.43□□□□□ -0.26
LIMS1-206ENST00000414829 DNASE1L1P49184 302 aa13.43□□□□□ -0.26
LIMS1-206ENST00000414829 KHKP50053 298 aa13.43□□□□□ -0.26
LIMS1-206ENST00000414829 POU6F2P78424 691 aaPredicted RBP13.43□□□□□ -0.26
LIMS1-206ENST00000414829 GUCY1A3Q02108 690 aa13.43□□□□□ -0.26
LIMS1-206ENST00000414829 GAB1Q13480 694 aa13.43□□□□□ -0.26
LIMS1-206ENST00000414829 IGFBP7Q16270 282 aa13.43□□□□□ -0.26
LIMS1-206ENST00000414829 ATAD3BQ5T9A4 648 aa13.43□□□□□ -0.26
LIMS1-206ENST00000414829 ARHGAP11AQ6P4F7 1023 aa13.43□□□□□ -0.26
LIMS1-206ENST00000414829 ANKRD46Q86W74 232 aa13.43□□□□□ -0.26
LIMS1-206ENST00000414829 SIAH3Q8IW03 269 aa13.43□□□□□ -0.26
LIMS1-206ENST00000414829 ZNF527Q8NB42 609 aa13.43□□□□□ -0.26
LIMS1-206ENST00000414829 MIPOL1Q8TD10 442 aa13.43□□□□□ -0.26
LIMS1-206ENST00000414829 RMND5BQ96G75 393 aaPredicted RBP13.43□□□□□ -0.26
LIMS1-206ENST00000414829 SLC35G5Q96KT7 338 aa13.43□□□□□ -0.26
LIMS1-206ENST00000414829 MARK4Q96L34 752 aa13.43□□□□□ -0.26
LIMS1-206ENST00000414829 TEX37Q96LM6 180 aa13.43□□□□□ -0.26
LIMS1-206ENST00000414829 EBF4Q9BQW3 602 aa13.43□□□□□ -0.26
LIMS1-206ENST00000414829 NSRP1Q9H0G5 558 aaKnown RBP13.43□□□□□ -0.26
LIMS1-206ENST00000414829 ZNF703Q9H7S9 590 aaPredicted RBP13.43□□□□□ -0.26
LIMS1-206ENST00000414829 ZDHHC11Q9H8X9 412 aa13.43□□□□□ -0.26
LIMS1-206ENST00000414829 EXD2Q9NVH0 621 aa13.43□□□□□ -0.26
LIMS1-206ENST00000414829 NPIPA1Q9UND3 350 aa13.43□□□□□ -0.26
LIMS1-206ENST00000414829 CCDC154A6NI56 674 aa13.42□□□□□ -0.26
LIMS1-206ENST00000414829 SCN2BO60939 215 aa13.42□□□□□ -0.26
LIMS1-206ENST00000414829 TRIM3O75382 744 aaPredicted RBP13.42□□□□□ -0.26
LIMS1-206ENST00000414829 UNC5CO95185 931 aa13.42□□□□□ -0.26
LIMS1-206ENST00000414829 ANP32DO95626 131 aa13.42□□□□□ -0.26
LIMS1-206ENST00000414829 CPSF4O95639 269 aaKnown RBP13.42□□□□□ -0.26
LIMS1-206ENST00000414829 KRT75O95678 551 aa13.42□□□□□ -0.26
LIMS1-206ENST00000414829 HPGDP15428 266 aa13.42□□□□□ -0.26
LIMS1-206ENST00000414829 NCF2P19878 526 aaPredicted RBP13.42□□□□□ -0.26
LIMS1-206ENST00000414829 EVI2BP34910 448 aa13.42□□□□□ -0.26
LIMS1-206ENST00000414829 TRPC1P48995 793 aa13.42□□□□□ -0.26
LIMS1-206ENST00000414829 FOXO1Q12778 655 aa13.42□□□□□ -0.26
LIMS1-206ENST00000414829 DUSP5Q16690 384 aa13.42□□□□□ -0.26
LIMS1-206ENST00000414829 TIGD2Q4W5G0 525 aa13.42□□□□□ -0.26
LIMS1-206ENST00000414829 EXOSC6Q5RKV6 272 aaKnown RBP13.42□□□□□ -0.26
LIMS1-206ENST00000414829 MISPQ8IVT2 679 aa13.42□□□□□ -0.26
LIMS1-206ENST00000414829 SLC16A11Q8NCK7 471 aa13.42□□□□□ -0.26
LIMS1-206ENST00000414829 OR5AK3PQ8NH89 298 aa13.42□□□□□ -0.26
LIMS1-206ENST00000414829 OIT3Q8WWZ8 545 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms