RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 IRAK1BP1Q5VVH5 260 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 KHDRBS2Q5VWX1 349 aaKnown RBP4.54□□□□□ -1.68
VPS41-205ENST00000414632 C18orf63Q68DL7 685 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 OR4C11Q6IEV9 310 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 TCTN3Q6NUS6 607 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 FAM180BQ6P0A1 224 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 PAPD4Q6PIY7 484 aaKnown RBP4.54□□□□□ -1.68
VPS41-205ENST00000414632 CYP20A1Q6UW02 462 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 ZYG11AQ6WRX3 759 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 QSOX2Q6ZRP7 698 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 ZCCHC23Q6ZST2 131 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 GPRIN3Q6ZVF9 776 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 TRABD2AQ86V40 505 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 C10orf107Q8IVU9 208 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 OR4N5Q8IXE1 308 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 MMP21Q8N119 569 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 RBMXL3Q8N7X1 1067 aaKnown RBP4.54□□□□□ -1.68
VPS41-205ENST00000414632 ACOT4Q8N9L9 421 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 L3MBTL4Q8NA19 623 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 WDR20Q8TBZ3 569 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 SELENOMQ8WWX9 145 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.54□□□□□ -1.686e-6■■■■■ 28.1
VPS41-205ENST00000414632 CMTM7Q96FZ5 175 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 APOPT1Q96IL0 206 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 KCNC2Q96PR1 638 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 FAM111AQ96PZ2 611 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 OR1F2PQ96R84 312 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 SERINC2Q96SA4 455 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 TBCDQ9BTW9 1192 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 MECRQ9BV79 373 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 NTMT1Q9BV86 223 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 MRPL1Q9BYD6 325 aaKnown RBP4.54□□□□□ -1.68
VPS41-205ENST00000414632 LHPPQ9H008 270 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 IQCGQ9H095 443 aaKnown RBP4.54□□□□□ -1.68
VPS41-205ENST00000414632 SLC25A32Q9H2D1 315 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 ELOVL6Q9H5J4 265 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 SEC61A2Q9H9S3 476 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 KCNK13Q9HB14 408 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 MLXIPLQ9NP71 852 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 MID1IP1Q9NPA3 183 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 RRAGDQ9NQL2 400 aaPredicted RBP4.54□□□□□ -1.68
VPS41-205ENST00000414632 PNO1Q9NRX1 252 aaKnown RBP4.54□□□□□ -1.68
VPS41-205ENST00000414632 ANKRD10Q9NXR5 420 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 SLC17A7Q9P2U7 560 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 C19orf25Q9UFG5 118 aaPredicted RBP4.54□□□□□ -1.68
VPS41-205ENST00000414632 LGALS13Q9UHV8 139 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 RAB21Q9UL25 225 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 DAPP1Q9UN19 280 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 SLC12A4Q9UP95 1085 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 TIMM22Q9Y584 194 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 SETXQ7Z333 2677 aaKnown RBP4.54□□□□□ -1.68
VPS41-205ENST00000414632 MYO18BQ8IUG5 2567 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 NCKAP5O14513 1909 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 LOC102723996A0A087X1L8 192 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 WDR91A4D1P6 747 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 MANBAO00462 879 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 CYR61O00622 381 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 RGS16O15492 202 aaPredicted RBP4.53□□□□□ -1.68
VPS41-205ENST00000414632 SUV39H1O43463 412 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 TMPRSS11DO60235 418 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 FGF17O60258 216 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 PRKNO60260 465 aaPredicted RBP4.53□□□□□ -1.68
VPS41-205ENST00000414632 UGDHO60701 494 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 DPM1O60762 260 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 CRCPO75575 148 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 MYO1DO94832 1006 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 AIFM1O95831 613 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 OTCP00480 354 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 IFNA16P05015 189 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 ALPPP05187 535 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 KLK1P06870 262 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 CPA3P15088 417 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 HK1P19367 917 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 ZNF10P21506 573 aaPredicted RBP4.53□□□□□ -1.68
VPS41-205ENST00000414632 GSTM2P28161 218 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 ALDH3A1P30838 453 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 BSGP35613 385 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 RPS19P39019 145 aaKnown RBP4.53□□□□□ -1.68
VPS41-205ENST00000414632 PRKAG1P54619 331 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 NAGLUP54802 743 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 SLC26A5P58743 744 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 ARG2P78540 354 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 HMGCS1Q01581 520 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 TNFRSF17Q02223 184 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 STX4Q12846 297 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 LCP2Q13094 533 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 CCDC153Q494R4 210 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 GGTA1PQ4G0N0 100 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 TMEM35AQ53FP2 167 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 CFAP157Q5JU67 520 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 VWA5B1Q5TIE3 1220 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 AGAP7PQ5VUJ5 663 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 FRG2Q64ET8 278 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 CLEC6AQ6EIG7 209 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 NIPAL1Q6NVV3 410 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 TMEM108Q6UXF1 575 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 C16orf47Q6ZP98 133 aaPredicted RBP4.53□□□□□ -1.68
VPS41-205ENST00000414632 DGAT2L6Q6ZPD8 337 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 C1orf122Q6ZSJ8 110 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 CUZD1Q86UP6 607 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms