RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 EFHD2Q96C19 240 aaPredicted RBP10.25□□□□□ -0.77
RFFL-204ENST00000414419 SLC35A4Q96G79 324 aa10.25□□□□□ -0.77
RFFL-204ENST00000414419 ZNF764Q96H86 408 aaPredicted RBP10.25□□□□□ -0.77
RFFL-204ENST00000414419 PRPF18Q99633 342 aaKnown RBP10.25□□□□□ -0.77
RFFL-204ENST00000414419 SLC6A15Q9H2J7 730 aa10.25□□□□□ -0.77
RFFL-204ENST00000414419 GALNT9Q9HCQ5 603 aa10.25□□□□□ -0.77
RFFL-204ENST00000414419 ATAD3AQ9NVI7 634 aa10.25□□□□□ -0.77
RFFL-204ENST00000414419 CBLCQ9ULV8 474 aa10.25□□□□□ -0.77
RFFL-204ENST00000414419 MAPRE3Q9UPY8 281 aa10.25□□□□□ -0.77
RFFL-204ENST00000414419 EIF3LQ9Y262 564 aaKnown RBP10.25□□□□□ -0.77
RFFL-204ENST00000414419 C15orf41Q9Y2V0 281 aa10.25□□□□□ -0.77
RFFL-204ENST00000414419 HRH3Q9Y5N1 445 aa10.25□□□□□ -0.77
RFFL-204ENST00000414419 INTS1Q8N201 2190 aaKnown RBP10.25□□□□□ -0.77
RFFL-204ENST00000414419 MAST4O15021 2626 aa10.24□□□□□ -0.77
RFFL-204ENST00000414419 TTC36A6NLP5 189 aa10.24□□□□□ -0.77
RFFL-204ENST00000414419 FAM47E-STBD1D6RA91 191 aa10.24□□□□□ -0.77
RFFL-204ENST00000414419 SNPHO15079 494 aa10.24□□□□□ -0.77
RFFL-204ENST00000414419 ITM2AO43736 263 aa10.24□□□□□ -0.77
RFFL-204ENST00000414419 TSPAN2O60636 221 aa10.24□□□□□ -0.77
RFFL-204ENST00000414419 TBX19O60806 448 aa10.24□□□□□ -0.77
RFFL-204ENST00000414419 LYPLA1O75608 230 aaPredicted RBP10.24□□□□□ -0.77
RFFL-204ENST00000414419 CBR3O75828 277 aa10.24□□□□□ -0.77
RFFL-204ENST00000414419 HPNP05981 417 aa10.24□□□□□ -0.77
RFFL-204ENST00000414419 IFI6P09912 130 aa10.24□□□□□ -0.77
RFFL-204ENST00000414419 DHRS4L1P0CG22 281 aa10.24□□□□□ -0.77
RFFL-204ENST00000414419 PTPN6P29350 595 aa10.24□□□□□ -0.77
RFFL-204ENST00000414419 ARRB2P32121 409 aa10.24□□□□□ -0.77
RFFL-204ENST00000414419 SLC1A6P48664 564 aa10.24□□□□□ -0.77
RFFL-204ENST00000414419 CLK3P49761 638 aaKnown RBP10.24□□□□□ -0.77
RFFL-204ENST00000414419 CDK9P50750 372 aaKnown RBP10.24□□□□□ -0.77
RFFL-204ENST00000414419 PSG6Q00889 435 aa10.24□□□□□ -0.77
RFFL-204ENST00000414419 STX3Q13277 289 aa10.24□□□□□ -0.77
RFFL-204ENST00000414419 PDE7AQ13946 482 aa10.24□□□□□ -0.77
RFFL-204ENST00000414419 SF3B4Q15427 424 aaKnown RBP eCLIP10.24□□□□□ -0.77
RFFL-204ENST00000414419 PDCD2Q16342 344 aaPredicted RBP10.24□□□□□ -0.77
RFFL-204ENST00000414419 TNFAIP8L3Q5GJ75 292 aa10.24□□□□□ -0.77
RFFL-204ENST00000414419 C6orf136Q5SQH8 315 aa10.24□□□□□ -0.77
RFFL-204ENST00000414419 CPTPQ5TA50 214 aa10.24□□□□□ -0.77
RFFL-204ENST00000414419 IL23RQ5VWK5 629 aa10.24□□□□□ -0.77
RFFL-204ENST00000414419 ANKRD42Q8N9B4 389 aa10.24□□□□□ -0.77
RFFL-204ENST00000414419 OR4N2Q8NGD1 307 aa10.24□□□□□ -0.77
RFFL-204ENST00000414419 OR6Y1Q8NGX8 325 aa10.24□□□□□ -0.77
RFFL-204ENST00000414419 MARVELD3Q96A59 401 aa10.24□□□□□ -0.77
RFFL-204ENST00000414419 C3orf30Q96M34 536 aa10.24□□□□□ -0.77
RFFL-204ENST00000414419 C1orf50Q9BV19 199 aa10.24□□□□□ -0.77
RFFL-204ENST00000414419 UBQLN3Q9H347 655 aa10.24□□□□□ -0.77
RFFL-204ENST00000414419 EQTNQ9NQ60 294 aa10.24□□□□□ -0.77
RFFL-204ENST00000414419 ACSS1Q9NUB1 689 aaPredicted RBP10.24□□□□□ -0.77
RFFL-204ENST00000414419 SPRR3Q9UBC9 169 aa10.24□□□□□ -0.77
RFFL-204ENST00000414419 GIMAP2Q9UG22 337 aa10.24□□□□□ -0.77
RFFL-204ENST00000414419 RNF6Q9Y252 685 aa10.24□□□□□ -0.77
RFFL-204ENST00000414419 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.24□□□□□ -0.77
RFFL-204ENST00000414419 RAP2CQ9Y3L5 183 aa10.24□□□□□ -0.77
RFFL-204ENST00000414419 PCDHGB3Q9Y5G1 929 aa10.24□□□□□ -0.77
RFFL-204ENST00000414419 MED12Q93074 2177 aa10.24□□□□□ -0.77
RFFL-204ENST00000414419 UNC79Q9P2D8 2635 aa10.23□□□□□ -0.77
RFFL-204ENST00000414419 HCFC1P51610 2035 aa10.23□□□□□ -0.77
RFFL-204ENST00000414419 PCNX3Q9H6A9 2034 aa10.23□□□□□ -0.77
RFFL-204ENST00000414419 AHRRA9YTQ3 701 aa10.23□□□□□ -0.77
RFFL-204ENST00000414419 SCAMP2O15127 329 aaKnown RBP10.23□□□□□ -0.77
RFFL-204ENST00000414419 EMC8O43402 210 aa10.23□□□□□ -0.77
RFFL-204ENST00000414419 KCNH1O95259 989 aa10.23□□□□□ -0.77
RFFL-204ENST00000414419 COX6B1P14854 86 aa10.23□□□□□ -0.77
RFFL-204ENST00000414419 PRPS1L1P21108 318 aa10.23□□□□□ -0.77
RFFL-204ENST00000414419 ENDOUP21128 410 aaKnown RBP10.23□□□□□ -0.77
RFFL-204ENST00000414419 BGNP21810 368 aa10.23□□□□□ -0.77
RFFL-204ENST00000414419 GRNP28799 593 aaKnown RBP10.23□□□□□ -0.77
RFFL-204ENST00000414419 CHRNB4P30926 498 aa10.23□□□□□ -0.77
RFFL-204ENST00000414419 GABRA3P34903 492 aa10.23□□□□□ -0.77
RFFL-204ENST00000414419 PTGER4P35408 488 aa10.23□□□□□ -0.77
RFFL-204ENST00000414419 PTGDSP41222 190 aa10.23□□□□□ -0.77
RFFL-204ENST00000414419 RFX3P48380 749 aa10.23□□□□□ -0.77
RFFL-204ENST00000414419 RPL14P50914 215 aaKnown RBP10.23□□□□□ -0.77
RFFL-204ENST00000414419 NUP107P57740 925 aa10.23□□□□□ -0.77
RFFL-204ENST00000414419 PRR5P85299 388 aa10.23□□□□□ -0.77
RFFL-204ENST00000414419 GAB1Q13480 694 aa10.23□□□□□ -0.77
RFFL-204ENST00000414419 ZNF385BQ569K4 471 aa10.23□□□□□ -0.77
RFFL-204ENST00000414419 WIPI1Q5MNZ9 446 aaPredicted RBP10.23□□□□□ -0.77
RFFL-204ENST00000414419 C1orf185Q5T7R7 199 aa10.23□□□□□ -0.77
RFFL-204ENST00000414419 FNDC7Q5VTL7 733 aa10.23□□□□□ -0.77
RFFL-204ENST00000414419 WDR53Q7Z5U6 358 aaPredicted RBP10.23□□□□□ -0.77
RFFL-204ENST00000414419 PLCZ1Q86YW0 608 aa10.23□□□□□ -0.77
RFFL-204ENST00000414419 PM20D2Q8IYS1 436 aa10.23□□□□□ -0.77
RFFL-204ENST00000414419 RPRMLQ8N4K4 120 aa10.23□□□□□ -0.77
RFFL-204ENST00000414419 MARVELD2Q8N4S9 558 aa10.23□□□□□ -0.77
RFFL-204ENST00000414419 NATD1Q8N6N6 113 aa10.23□□□□□ -0.77
RFFL-204ENST00000414419 ZNF781Q8N8C0 355 aa10.23□□□□□ -0.77
RFFL-204ENST00000414419 CDRT4Q8N9R6 151 aa10.23□□□□□ -0.77
RFFL-204ENST00000414419 NUP43Q8NFH3 380 aa10.23□□□□□ -0.77
RFFL-204ENST00000414419 OR14L1PQ8NHC6 308 aa10.23□□□□□ -0.77
RFFL-204ENST00000414419 GPR151Q8TDV0 419 aa10.23□□□□□ -0.77
RFFL-204ENST00000414419 PPP1R36Q96LQ0 422 aa10.23□□□□□ -0.77
RFFL-204ENST00000414419 TTYH2Q9BSA4 534 aa10.23□□□□□ -0.77
RFFL-204ENST00000414419 LMF2Q9BU23 707 aaKnown RBP10.23□□□□□ -0.77
RFFL-204ENST00000414419 SERHLQ9NQF3 203 aa10.23□□□□□ -0.77
RFFL-204ENST00000414419 SDHAF3Q9NRP4 125 aa10.23□□□□□ -0.77
RFFL-204ENST00000414419 NOP53Q9NZM5 478 aaKnown RBP10.23□□□□□ -0.77
RFFL-204ENST00000414419 ATP6V1HQ9UI12 483 aa10.23□□□□□ -0.77
RFFL-204ENST00000414419 CAMK2AQ9UQM7 478 aa10.23□□□□□ -0.77
RFFL-204ENST00000414419 SLC6A5Q9Y345 797 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms