RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 REEP4Q9H6H4 257 aa9.3□□□□□ -0.92
DDB1-202ENST00000414411 MKKSQ9NPJ1 570 aaPredicted RBP9.3□□□□□ -0.92
DDB1-202ENST00000414411 LANCL2Q9NS86 450 aa9.3□□□□□ -0.92
DDB1-202ENST00000414411 SH3BP4Q9P0V3 963 aa9.3□□□□□ -0.92
DDB1-202ENST00000414411 TRPC4Q9UBN4 977 aa9.3□□□□□ -0.92
DDB1-202ENST00000414411 BAG5Q9UL15 447 aa9.3□□□□□ -0.92
DDB1-202ENST00000414411 MSRB2Q9Y3D2 182 aa9.3□□□□□ -0.92
DDB1-202ENST00000414411 ZFHX4Q86UP3 3567 aa9.3□□□□□ -0.92
DDB1-202ENST00000414411 APC2O95996 2303 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 ACACAQ13085 2346 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 MYO1GB0I1T2 1018 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 BRINP1O60477 761 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 DPM1O60762 260 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 TBX19O60806 448 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 CNOT3O75175 753 aaKnown RBP9.29□□□□□ -0.92
DDB1-202ENST00000414411 JRKO75564 520 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 DIRAS1O95057 198 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 AIFM1O95831 613 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 FURINP09958 794 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 CCDC159P0C7I6 412 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 DDCP20711 480 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 AGXTP21549 392 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 MATN1P21941 496 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 CPN2P22792 545 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 CD82P27701 267 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 DAPP51397 102 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 RPS6KA3P51812 740 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 MVDP53602 400 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 SHC2P98077 582 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 TNFRSF17Q02223 184 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 DCTN2Q13561 401 aaKnown RBP9.29□□□□□ -0.92
DDB1-202ENST00000414411 RAPSNQ13702 412 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 KEAP1Q14145 624 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 HEPACAMQ14CZ8 416 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 PRSS53Q2L4Q9 553 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 IQCCQ4KMZ1 466 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 VWA2Q5GFL6 755 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.29□□□□□ -0.92
DDB1-202ENST00000414411 ARHGAP40Q5TG30 622 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 GTF2IRD2BQ6EKJ0 949 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 FAM198BQ6UWH4 519 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 GALNT5Q7Z7M9 940 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 GTF2IRD2Q86UP8 949 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 ZC3H7AQ8IWR0 971 aaKnown RBP9.29□□□□□ -0.92
DDB1-202ENST00000414411 C11orf65Q8NCR3 313 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 ADAMTS18Q8TE60 1221 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 MAL2Q969L2 176 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 ZNF566Q969W8 418 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 FKBP10Q96AY3 582 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 ZNF764Q96H86 408 aaPredicted RBP9.29□□□□□ -0.92
DDB1-202ENST00000414411 PEX11GQ96HA9 241 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 MAGED4Q96JG8 741 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 ATAD3AQ9NVI7 634 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 EHD3Q9NZN3 535 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 CTSFQ9UBX1 484 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 SAMHD1Q9Y3Z3 626 aaKnown RBP9.29□□□□□ -0.92
DDB1-202ENST00000414411 CLDN16Q9Y5I7 305 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 CFAP47Q6ZTR5 3102 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 A0A1W2PPW3 197 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 STMND1H3BQB6 276 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 TERTO14746 1132 aaKnown RBP9.29□□□□□ -0.92
DDB1-202ENST00000414411 NOL3O60936 208 aaKnown RBP9.29□□□□□ -0.92
DDB1-202ENST00000414411 UGT2B11O75310 529 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 PRKRAO75569 313 aaKnown RBP9.29□□□□□ -0.92
DDB1-202ENST00000414411 KLF7O75840 302 aaPredicted RBP9.29□□□□□ -0.92
DDB1-202ENST00000414411 FHP07954 510 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 ADRB1P08588 477 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 CCNYL3P0C7X3 344 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 TLX1P31314 330 aaPredicted RBP9.29□□□□□ -0.92
DDB1-202ENST00000414411 RPL3P39023 403 aaKnown RBP9.29□□□□□ -0.92
DDB1-202ENST00000414411 BUD31P41223 144 aaPredicted RBP9.29□□□□□ -0.92
DDB1-202ENST00000414411 EFNA3P52797 238 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 TMBIM6P55061 237 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 HBA1P69905 142 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 KCNJ10P78508 379 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 ERV3-1Q14264 604 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 SLC48A1Q6P1K1 146 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 LAPTM4BQ86VI4 370 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 ZNF595Q8IYB9 648 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 ESX1Q8N693 406 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 SETD9Q8NE22 299 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 STT3BQ8TCJ2 826 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 TANKQ92844 425 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 MR1Q95460 341 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 MTERF3Q96E29 417 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 TPD52L3Q96J77 140 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 C7orf34Q96L11 122 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 FAIM2Q9BWQ8 316 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 LHPPQ9H008 270 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 RIBC2Q9H4K1 309 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 C12orf49Q9H741 205 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 REEP1Q9H902 201 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 WDR54Q9H977 334 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 EXD2Q9NVH0 621 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 GPATCH2Q9NW75 528 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 ADPRHL2Q9NX46 363 aa9.29□□□□□ -0.92
DDB1-202ENST00000414411 THUMPD1Q9NXG2 353 aaKnown RBP9.29□□□□□ -0.92
DDB1-202ENST00000414411 PDP1Q9P0J1 537 aaPredicted RBP9.29□□□□□ -0.92
DDB1-202ENST00000414411 FAF1Q9UNN5 650 aaPredicted RBP9.29□□□□□ -0.92
DDB1-202ENST00000414411 SPACA6W5XKT8 324 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms