RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 NAAAQ02083 359 aa2.89□□□□□ -1.95
HMGB1P11-201ENST00000413899 PEX6Q13608 980 aa2.89□□□□□ -1.95
HMGB1P11-201ENST00000413899 C14orf28Q4W4Y0 310 aa2.89□□□□□ -1.95
HMGB1P11-201ENST00000413899 TAF3Q5VWG9 929 aa2.89□□□□□ -1.95
HMGB1P11-201ENST00000413899 CCBE1Q6UXH8 406 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P11-201ENST00000413899 ZNF600Q6ZNG1 722 aa2.89□□□□□ -1.95
HMGB1P11-201ENST00000413899 SNX32Q86XE0 403 aa2.89□□□□□ -1.95
HMGB1P11-201ENST00000413899 RELL2Q8NC24 303 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P11-201ENST00000413899 ACCSQ96QU6 501 aa2.89□□□□□ -1.95
HMGB1P11-201ENST00000413899 CPXM1Q96SM3 734 aa2.89□□□□□ -1.95
HMGB1P11-201ENST00000413899 GPR174Q9BXC1 333 aa2.89□□□□□ -1.95
HMGB1P11-201ENST00000413899 TEX13AQ9BXU3 409 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P11-201ENST00000413899 CARD9Q9H257 536 aa2.89□□□□□ -1.95
HMGB1P11-201ENST00000413899 DHRS4-AS1Q9P1J3 65 aa2.89□□□□□ -1.95
HMGB1P11-201ENST00000413899 SEC14L4Q9UDX3 406 aa2.89□□□□□ -1.95
HMGB1P11-201ENST00000413899 EMCNQ9ULC0 261 aa2.89□□□□□ -1.95
HMGB1P11-201ENST00000413899 TP53TG3Q9ULZ0 132 aa2.89□□□□□ -1.95
HMGB1P11-201ENST00000413899 TDRKHQ9Y2W6 561 aaKnown RBP2.89□□□□□ -1.95
HMGB1P11-201ENST00000413899 KCPQ6ZWJ8 1503 aa2.88□□□□□ -1.95
HMGB1P11-201ENST00000413899 ARAP2Q8WZ64 1704 aa2.88□□□□□ -1.95
HMGB1P11-201ENST00000413899 MYH3P11055 1940 aa2.88□□□□□ -1.95
HMGB1P11-201ENST00000413899 KDM6AO15550 1401 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P11-201ENST00000413899 TNS3Q68CZ2 1445 aa2.88□□□□□ -1.95
HMGB1P11-201ENST00000413899 NCOA3Q9Y6Q9 1424 aa2.88□□□□□ -1.95
HMGB1P11-201ENST00000413899 NPIPA5A0A0B4J1W7 369 aa2.88□□□□□ -1.95
HMGB1P11-201ENST00000413899 NPIPA5E9PKD4 350 aa2.88□□□□□ -1.95
HMGB1P11-201ENST00000413899 KERAO60938 352 aa2.88□□□□□ -1.95
HMGB1P11-201ENST00000413899 LRP3O75074 770 aa2.88□□□□□ -1.95
HMGB1P11-201ENST00000413899 ZNF253O75346 499 aa2.88□□□□□ -1.95
HMGB1P11-201ENST00000413899 GOT2P00505 430 aaKnown RBP2.88□□□□□ -1.95
HMGB1P11-201ENST00000413899 OAS1P00973 400 aaKnown RBP2.88□□□□□ -1.95
HMGB1P11-201ENST00000413899 HSD17B1P14061 328 aa2.88□□□□□ -1.95
HMGB1P11-201ENST00000413899 HLA-DPA1P20036 260 aa2.88□□□□□ -1.95
HMGB1P11-201ENST00000413899 PRKAR2BP31323 418 aa2.88□□□□□ -1.95
HMGB1P11-201ENST00000413899 PITPNBP48739 271 aa2.88□□□□□ -1.95
HMGB1P11-201ENST00000413899 CCL11P51671 97 aa2.88□□□□□ -1.95
HMGB1P11-201ENST00000413899 MFAP2P55001 183 aa2.88□□□□□ -1.95
HMGB1P11-201ENST00000413899 SSTP61278 116 aa2.88□□□□□ -1.95
HMGB1P11-201ENST00000413899 RPS4XP62701 263 aaKnown RBP2.88□□□□□ -1.95
HMGB1P11-201ENST00000413899 UBXN1Q04323 297 aa2.88□□□□□ -1.95
HMGB1P11-201ENST00000413899 PPP1R8Q12972 351 aaKnown RBP2.88□□□□□ -1.95
HMGB1P11-201ENST00000413899 ABRAXAS2Q15018 415 aa2.88□□□□□ -1.95
HMGB1P11-201ENST00000413899 LTB4RQ15722 352 aa2.88□□□□□ -1.95
HMGB1P11-201ENST00000413899 HKDC1Q2TB90 917 aa2.88□□□□□ -1.95
HMGB1P11-201ENST00000413899 HERC4Q5GLZ8 1057 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P11-201ENST00000413899 UTF1Q5T230 341 aa2.88□□□□□ -1.95
HMGB1P11-201ENST00000413899 ATAD3CQ5T2N8 411 aa2.88□□□□□ -1.95
HMGB1P11-201ENST00000413899 VITQ6UXI7 678 aa2.88□□□□□ -1.95
HMGB1P11-201ENST00000413899 STOX1Q6ZVD7 989 aa2.88□□□□□ -1.95
HMGB1P11-201ENST00000413899 GPD1LQ8N335 351 aa2.88□□□□□ -1.95
HMGB1P11-201ENST00000413899 ATP6V0A1Q93050 837 aa2.88□□□□□ -1.95
HMGB1P11-201ENST00000413899 BIRC7Q96CA5 298 aa2.88□□□□□ -1.95
HMGB1P11-201ENST00000413899 ZNF560Q96MR9 790 aa2.88□□□□□ -1.95
HMGB1P11-201ENST00000413899 THUMPD2Q9BTF0 503 aaKnown RBP2.88□□□□□ -1.95
HMGB1P11-201ENST00000413899 STARD5Q9NSY2 213 aa2.88□□□□□ -1.95
HMGB1P11-201ENST00000413899 FAM120CQ9NX05 1096 aaKnown RBP2.88□□□□□ -1.95
HMGB1P11-201ENST00000413899 TAS2R16Q9NYV7 291 aa2.88□□□□□ -1.95
HMGB1P11-201ENST00000413899 ARMCX1Q9P291 453 aa2.88□□□□□ -1.95
HMGB1P11-201ENST00000413899 LRP5O75197 1615 aa2.88□□□□□ -1.95
HMGB1P11-201ENST00000413899 SPEF2Q9C093 1822 aa2.88□□□□□ -1.95
HMGB1P11-201ENST00000413899 SCN7AQ01118 1682 aa2.88□□□□□ -1.95
HMGB1P11-201ENST00000413899 ZNF831Q5JPB2 1677 aa2.88□□□□□ -1.95
HMGB1P11-201ENST00000413899 TMEM94Q12767 1356 aa2.87□□□□□ -1.95
HMGB1P11-201ENST00000413899 CEMIPQ8WUJ3 1361 aa2.87□□□□□ -1.95
HMGB1P11-201ENST00000413899 ECM29Q5VYK3 1845 aa2.87□□□□□ -1.95
HMGB1P11-201ENST00000413899 SBF2Q86WG5 1849 aa2.87□□□□□ -1.95
HMGB1P11-201ENST00000413899 MACROD2A1Z1Q3 448 aa2.87□□□□□ -1.95
HMGB1P11-201ENST00000413899 CYB561D2O14569 222 aa2.87□□□□□ -1.95
HMGB1P11-201ENST00000413899 SYNGR4O95473 234 aa2.87□□□□□ -1.95
HMGB1P11-201ENST00000413899 NUDT14O95848 222 aa2.87□□□□□ -1.95
HMGB1P11-201ENST00000413899 P4HA1P13674 534 aa2.87□□□□□ -1.95
HMGB1P11-201ENST00000413899 UCP1P25874 307 aa2.87□□□□□ -1.95
HMGB1P11-201ENST00000413899 TRIM23P36406 574 aa2.87□□□□□ -1.95
HMGB1P11-201ENST00000413899 HNRNPFP52597 415 aaKnown RBP2.87□□□□□ -1.95
HMGB1P11-201ENST00000413899 HMGCS2P54868 508 aa2.87□□□□□ -1.95
HMGB1P11-201ENST00000413899 GALK2Q01415 458 aa2.87□□□□□ -1.95
HMGB1P11-201ENST00000413899 RUNX3Q13761 415 aa2.87□□□□□ -1.95
HMGB1P11-201ENST00000413899 CD226Q15762 336 aa2.87□□□□□ -1.95
HMGB1P11-201ENST00000413899 FAM219BQ5XKK7 198 aa2.87□□□□□ -1.95
HMGB1P11-201ENST00000413899 ATRAIDQ6UW56 229 aa2.87□□□□□ -1.95
HMGB1P11-201ENST00000413899 MFSD7Q6UXD7 560 aa2.87□□□□□ -1.95
HMGB1P11-201ENST00000413899 RANBP3LQ86VV4 465 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P11-201ENST00000413899 FBXL16Q8N461 479 aa2.87□□□□□ -1.95
HMGB1P11-201ENST00000413899 RHOXF1Q8NHV9 184 aa2.87□□□□□ -1.95
HMGB1P11-201ENST00000413899 ZPLD1Q8TCW7 415 aa2.87□□□□□ -1.95
HMGB1P11-201ENST00000413899 TBCKQ8TEA7 893 aa2.87□□□□□ -1.95
HMGB1P11-201ENST00000413899 CRYGNQ8WXF5 182 aa2.87□□□□□ -1.95
HMGB1P11-201ENST00000413899 ZBED6CLQ96FA7 236 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P11-201ENST00000413899 CFAP53Q96M91 514 aa2.87□□□□□ -1.95
HMGB1P11-201ENST00000413899 RANBP9Q96S59 729 aa2.87□□□□□ -1.95
HMGB1P11-201ENST00000413899 FAM173AQ9BQD7 235 aa2.87□□□□□ -1.95
HMGB1P11-201ENST00000413899 PNNQ9H307 717 aaKnown RBP2.87□□□□□ -1.95
HMGB1P11-201ENST00000413899 NRN1Q9NPD7 142 aa2.87□□□□□ -1.95
HMGB1P11-201ENST00000413899 CUTCQ9NTM9 273 aa2.87□□□□□ -1.95
HMGB1P11-201ENST00000413899 RCOR3Q9P2K3 495 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P11-201ENST00000413899 ENTPD4Q9Y227 616 aa2.87□□□□□ -1.95
HMGB1P11-201ENST00000413899 KLHDC2Q9Y2U9 406 aa2.87□□□□□ -1.95
HMGB1P11-201ENST00000413899 NAALAD2Q9Y3Q0 740 aa2.87□□□□□ -1.95
HMGB1P11-201ENST00000413899 THSD7AQ9UPZ6 1657 aa2.87□□□□□ -1.95
HMGB1P11-201ENST00000413899 MYH7P12883 1935 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms