RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 NANPQ8TBE9 248 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 SUN5Q8TC36 379 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 LRRC15Q8TF66 581 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 NUDCD2Q8WVJ2 157 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 LIPHQ8WWY8 451 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 FAM3CQ92520 227 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 MYLPFQ96A32 169 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 MRPL24Q96A35 216 aaKnown RBP3.96□□□□□ -1.77
BRCA1-204ENST00000412061 UPRTQ96BW1 309 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 PELI1Q96FA3 418 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 ELMO2Q96JJ3 720 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 C17orf77Q96MU5 243 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 TUBA1CQ9BQE3 449 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 MRPL37Q9BZE1 423 aaKnown RBP3.96□□□□□ -1.77
BRCA1-204ENST00000412061 DNTTIP1Q9H147 329 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 BLZF1Q9H2G9 400 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 HIPK2Q9H2X6 1198 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 SUDS3Q9H7L9 328 aaPredicted RBP3.96□□□□□ -1.77
BRCA1-204ENST00000412061 C3orf14Q9HBI5 128 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 LRRC4Q9HBW1 653 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 SLC25A19Q9HC21 320 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 POLD4Q9HCU8 107 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 LZTFL1Q9NQ48 299 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 TUBG2Q9NRH3 451 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 ECHDC1Q9NTX5 307 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 MED17Q9NVC6 651 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 KLHL28Q9NXS3 571 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 GHRLQ9UBU3 117 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 PEF1Q9UBV8 284 aaKnown RBP3.96□□□□□ -1.77
BRCA1-204ENST00000412061 PRDM4Q9UKN5 801 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 IKZF3Q9UKT9 509 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 TRBV4-1A0A0J9YWV2 114 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 LOC100506127A0A0U1RQW1 187 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 PLSCR5A0PG75 271 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 C9JVG2 144 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 KIAA0513O60268 411 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 ANXA9O76027 345 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 PPP1R3DO95685 299 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 FTH1P02794 183 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 FCER2P06734 321 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 CRYGCP07315 174 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 POU2F1P14859 743 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 EFNA1P20827 205 aaPredicted RBP3.95□□□□□ -1.78
BRCA1-204ENST00000412061 ANXA13P27216 316 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 LEPRP48357 1165 aaKnown RBP3.95□□□□□ -1.78
BRCA1-204ENST00000412061 CASP4P49662 377 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 NDST1P52848 882 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 LBX1P52954 281 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 FOXG1P55316 489 aaPredicted RBP3.95□□□□□ -1.78
BRCA1-204ENST00000412061 OR1D5P58170 312 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 RPL24P83731 157 aaKnown RBP3.95□□□□□ -1.78
BRCA1-204ENST00000412061 BNIP1Q12981 228 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 CUL1Q13616 776 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 MESDQ14696 234 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 Q3ZCU0 254 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 C6orf226Q5I0X4 101 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 BEND6Q5SZJ8 279 aaPredicted RBP3.95□□□□□ -1.78
BRCA1-204ENST00000412061 WLSQ5T9L3 541 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 DDI2Q5TDH0 399 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 TMEM107Q6UX40 140 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 NET1Q7Z628 596 aaPredicted RBP3.95□□□□□ -1.78
BRCA1-204ENST00000412061 NAGSQ8N159 534 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 CLEC4FQ8N1N0 589 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 ALLCQ8N6M5 410 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 CEP112Q8N8E3 955 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 Q8N9P0 234 aaPredicted RBP3.95□□□□□ -1.78
BRCA1-204ENST00000412061 SLC37A3Q8NCC5 494 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 STXBP6Q8NFX7 210 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 OR51G2Q8NGK0 314 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 OR5M9Q8NGP3 310 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 ZNF473Q8WTR7 871 aaKnown RBP3.95□□□□□ -1.78
BRCA1-204ENST00000412061 SECTM1Q8WVN6 248 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 IL17FQ96PD4 163 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 TECTBQ96PL2 329 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 CCT8L2Q96SF2 557 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 COPS8Q99627 209 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 IL12RB2Q99665 862 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 MEIS3Q99687 375 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 DCTN5Q9BTE1 182 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 C1QTNF4Q9BXJ3 329 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 CPVLQ9H3G5 476 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 ALG9Q9H6U8 611 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 DCTPP1Q9H773 170 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 STARD5Q9NSY2 213 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 MRPL22Q9NWU5 206 aaKnown RBP3.95□□□□□ -1.78
BRCA1-204ENST00000412061 MEMO1Q9Y316 297 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 TRAV25A0A0B4J276 109 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 FAM74A7A6NL05 159 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 A8MU76 341 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 CASKO14936 926 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 SYNGR3O43761 229 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 B3GAT3O94766 335 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 CST1P01037 141 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 CRYGBP07316 175 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 ANXA3P12429 323 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 PRKACAP17612 351 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 PRKACBP22694 351 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 CA6P23280 308 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 CSNK1EP49674 416 aaKnown RBP3.95□□□□□ -1.78
BRCA1-204ENST00000412061 STARP49675 285 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms