RNA–Protein interactions for RNA: ENST00000411849.1

HMGN1P20-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 20, humanhuman

BASIC

Gene HMGN1P20, Length 300 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P20-201ENST00000411849 ASB4Q9Y574 426 aa5.39□□□□□ -1.55
HMGN1P20-201ENST00000411849 HEATR1Q9H583 2144 aaKnown RBP5.39□□□□□ -1.55
HMGN1P20-201ENST00000411849 A0A0A6YYD5 115 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 FAM234BA2RU67 622 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 WASHC1A8K0Z3 465 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 UBFD1O14562 309 aaKnown RBP5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 CLOCKO15516 846 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 SEC14L5O43304 696 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 SSX4O60224 188 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 TMPRSS11DO60235 418 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 ZIC3O60481 467 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 EEDO75530 441 aaKnown RBP5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 REM1O75628 298 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 URI1O94763 535 aaPredicted RBP5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 CT62P0C5K7 136 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 CPMP14384 443 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 SLC25A16P16260 332 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 PORP16435 677 aaPredicted RBP5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 EPORP19235 508 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 NT5EP21589 574 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 DRD5P21918 477 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 TCEA1P23193 301 aaKnown RBP5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 GRK2P25098 689 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 KRT20P35900 424 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 PPICP45877 212 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 XKP51811 444 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 NUDT6P53370 316 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 DSCR4P56555 118 aaPredicted RBP5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 ARL4CP56559 192 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 B3GALT5-AS1P59052 145 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 TAS2R39P59534 338 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 PSPHP78330 225 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 MRPS22P82650 360 aaKnown RBP5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 LOXL1Q08397 574 aaPredicted RBP5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 FAPQ12884 760 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 PDIA2Q13087 525 aaKnown RBP5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 CUL3Q13618 768 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 EFR3AQ14156 821 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 SQLEQ14534 574 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 ZNF460Q14592 562 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 GANABQ14697 944 aaKnown RBP5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 SLMAPQ14BN4 828 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 GUSBP1Q15486 140 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 TRADDQ15628 312 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 SGCBQ16585 318 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 ZNF672Q499Z4 452 aaPredicted RBP5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 FBXO48Q5FWF7 155 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 HP1BP3Q5SSJ5 553 aaPredicted RBP5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 NCMAPQ5T1S8 102 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 RAET1LQ5VY80 246 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 STEAP4Q687X5 459 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 DESI1Q6ICB0 168 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 GRHL2Q6ISB3 625 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 DNAJC14Q6Y2X3 702 aaPredicted RBP5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 ZC3HC1Q86WB0 502 aaKnown RBP5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 MYLK4Q86YV6 388 aaPredicted RBP5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 ADCY4Q8NFM4 1077 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 STEAP2Q8NFT2 490 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 OR4K17Q8NGC6 315 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 LILRB1Q8NHL6 650 aaPredicted RBP5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 HUS1BQ8NHY5 278 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 RAB3IL1Q8TBN0 382 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 ANKRD49Q8WVL7 239 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 ESAMQ96AP7 390 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 ITPKCQ96DU7 683 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 C11orf24Q96F05 449 aaPredicted RBP5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 TSPAN17Q96FV3 270 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 SLC35A4Q96G79 324 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 GMPPAQ96IJ6 420 aaPredicted RBP5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 ADAD1Q96M93 576 aaKnown RBP5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 COL21A1Q96P44 957 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 MTERF1Q99551 399 aaKnown RBP5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 LRRC1Q9BTT6 524 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 NTMT1Q9BV86 223 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 HDHD5Q9BXW7 423 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 ITPAQ9BY32 194 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 PRRG4Q9BZD6 226 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 BRINP2Q9C0B6 783 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 DPH5Q9H2P9 285 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 PTGES2Q9H7Z7 377 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 MOCS1Q9NZB8 636 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 GRHL1Q9NZI5 618 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 EHD3Q9NZN3 535 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 PPP4R1LQ9P1A2 415 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 PRODH2Q9UF12 536 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 BCAP29Q9UHQ4 241 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 CHMP2BQ9UQN3 213 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 PCDHGA11Q9Y5H2 935 aa5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 MAGED1Q9Y5V3 778 aaPredicted RBP5.38□□□□□ -1.55
HMGN1P20-201ENST00000411849 IGHV4-30-2A0A087WSY4 118 aa5.37□□□□□ -1.55
HMGN1P20-201ENST00000411849 ELOA3DA6NLF2 546 aaPredicted RBP5.37□□□□□ -1.55
HMGN1P20-201ENST00000411849 H3BML4 177 aa5.37□□□□□ -1.55
HMGN1P20-201ENST00000411849 KIF2AO00139 706 aaPredicted RBP5.37□□□□□ -1.55
HMGN1P20-201ENST00000411849 PGRMC2O15173 223 aa5.37□□□□□ -1.55
HMGN1P20-201ENST00000411849 TO15178 435 aa5.37□□□□□ -1.55
HMGN1P20-201ENST00000411849 EIF3HO15372 352 aaKnown RBP eCLIP5.37□□□□□ -1.55
HMGN1P20-201ENST00000411849 LMX1BO60663 402 aa5.37□□□□□ -1.55
HMGN1P20-201ENST00000411849 ATP1B1P05026 303 aa5.37□□□□□ -1.55
HMGN1P20-201ENST00000411849 PGRP06401 933 aa5.37□□□□□ -1.55
HMGN1P20-201ENST00000411849 CCDC166P0CW27 439 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms