RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 RAI1Q7Z5J4 1906 aaPredicted RBP12.86□□□□□ -0.35
HLA-DQB2-229ENST00000411527 C17orf51A8MQB3 221 aa12.86□□□□□ -0.35
HLA-DQB2-229ENST00000411527 B4DXG7 233 aa12.86□□□□□ -0.35
HLA-DQB2-229ENST00000411527 INAFM1C9JVW0 142 aa12.86□□□□□ -0.35
HLA-DQB2-229ENST00000411527 C16orf97H3BN30 126 aa12.86□□□□□ -0.35
HLA-DQB2-229ENST00000411527 STX16-NPEPL1H3BU86 382 aa12.86□□□□□ -0.35
HLA-DQB2-229ENST00000411527 PPP6CO00743 305 aa12.86□□□□□ -0.35
HLA-DQB2-229ENST00000411527 STX16O14662 325 aa12.86□□□□□ -0.35
HLA-DQB2-229ENST00000411527 SMIM24O75264 130 aa12.86□□□□□ -0.35
HLA-DQB2-229ENST00000411527 BCAS2O75934 225 aaPredicted RBP12.86□□□□□ -0.35
HLA-DQB2-229ENST00000411527 ESRRBO95718 433 aa12.86□□□□□ -0.35
HLA-DQB2-229ENST00000411527 RBP1P09455 135 aa12.86□□□□□ -0.35
HLA-DQB2-229ENST00000411527 IL12BP29460 328 aa12.86□□□□□ -0.35
HLA-DQB2-229ENST00000411527 PNLIPRP2P54317 469 aa12.86□□□□□ -0.35
HLA-DQB2-229ENST00000411527 GAS1P54826 345 aa12.86□□□□□ -0.35
HLA-DQB2-229ENST00000411527 DSCR4P56555 118 aaPredicted RBP12.86□□□□□ -0.35
HLA-DQB2-229ENST00000411527 GGTA1PQ4G0N0 100 aa12.86□□□□□ -0.35
HLA-DQB2-229ENST00000411527 ZNF628Q5EBL2 1059 aa12.86□□□□□ -0.35
HLA-DQB2-229ENST00000411527 ZDHHC24Q6UX98 284 aa12.86□□□□□ -0.35
HLA-DQB2-229ENST00000411527 C20orf204Q6ZNR8 217 aa12.86□□□□□ -0.35
HLA-DQB2-229ENST00000411527 MEIOBQ8N635 442 aa12.86□□□□□ -0.35
HLA-DQB2-229ENST00000411527 C1orf52Q8N6N3 182 aaKnown RBP12.86□□□□□ -0.35
HLA-DQB2-229ENST00000411527 GBP7Q8N8V2 638 aaPredicted RBP12.86□□□□□ -0.35
HLA-DQB2-229ENST00000411527 OR4K17Q8NGC6 315 aa12.86□□□□□ -0.35
HLA-DQB2-229ENST00000411527 PPP1R14CQ8TAE6 165 aa12.86□□□□□ -0.35
HLA-DQB2-229ENST00000411527 ZNF675Q8TD23 568 aa12.86□□□□□ -0.35
HLA-DQB2-229ENST00000411527 KAT2AQ92830 837 aa12.86□□□□□ -0.35
HLA-DQB2-229ENST00000411527 EFHD2Q96C19 240 aaPredicted RBP12.86□□□□□ -0.35
HLA-DQB2-229ENST00000411527 ZNF845Q96IR2 970 aaPredicted RBP12.86□□□□□ -0.35
HLA-DQB2-229ENST00000411527 BTBD9Q96Q07 612 aa12.86□□□□□ -0.35
HLA-DQB2-229ENST00000411527 HS3ST6Q96QI5 342 aa12.86□□□□□ -0.35
HLA-DQB2-229ENST00000411527 PIGQQ9BRB3 760 aa12.86□□□□□ -0.35
HLA-DQB2-229ENST00000411527 DSN1Q9H410 356 aa12.86□□□□□ -0.35
HLA-DQB2-229ENST00000411527 BRF2Q9HAW0 419 aa12.86□□□□□ -0.35
HLA-DQB2-229ENST00000411527 NMRK1Q9NWW6 199 aa12.86□□□□□ -0.35
HLA-DQB2-229ENST00000411527 PCNX3Q9H6A9 2034 aa12.86□□□□□ -0.35
HLA-DQB2-229ENST00000411527 RTTNQ86VV8 2226 aa12.85□□□□□ -0.35
HLA-DQB2-229ENST00000411527 H0YC42 278 aa12.85□□□□□ -0.35
HLA-DQB2-229ENST00000411527 EMC8O43402 210 aa12.85□□□□□ -0.35
HLA-DQB2-229ENST00000411527 CGAP01215 116 aa12.85□□□□□ -0.35
HLA-DQB2-229ENST00000411527 TSPAN8P19075 237 aa12.85□□□□□ -0.35
HLA-DQB2-229ENST00000411527 HK1P19367 917 aa12.85□□□□□ -0.35
HLA-DQB2-229ENST00000411527 CCKARP32238 428 aa12.85□□□□□ -0.35
HLA-DQB2-229ENST00000411527 SUCLG1P53597 346 aaKnown RBP12.85□□□□□ -0.35
HLA-DQB2-229ENST00000411527 TPD52P55327 224 aaPredicted RBP12.85□□□□□ -0.35
HLA-DQB2-229ENST00000411527 CLDN15P56746 228 aa12.85□□□□□ -0.35
HLA-DQB2-229ENST00000411527 EEFSECP57772 596 aaKnown RBP12.85□□□□□ -0.35
HLA-DQB2-229ENST00000411527 TRA2BP62995 288 aaKnown RBP12.85□□□□□ -0.35
HLA-DQB2-229ENST00000411527 ERCC6LQ2NKX8 1250 aa12.85□□□□□ -0.35
HLA-DQB2-229ENST00000411527 FAM219BQ5XKK7 198 aa12.85□□□□□ -0.35
HLA-DQB2-229ENST00000411527 ANKRD34AQ69YU3 496 aa12.85□□□□□ -0.35
HLA-DQB2-229ENST00000411527 NPSR1Q6W5P4 371 aa12.85□□□□□ -0.35
HLA-DQB2-229ENST00000411527 C22orf34Q6ZV56 151 aa12.85□□□□□ -0.35
HLA-DQB2-229ENST00000411527 SLC44A2Q8IWA5 706 aaPredicted RBP12.85□□□□□ -0.35
HLA-DQB2-229ENST00000411527 ZNF610Q8N9Z0 462 aa12.85□□□□□ -0.35
HLA-DQB2-229ENST00000411527 OR9A2Q8NGT5 310 aa12.85□□□□□ -0.35
HLA-DQB2-229ENST00000411527 MARK4Q96L34 752 aa12.85□□□□□ -0.35
HLA-DQB2-229ENST00000411527 HBEGFQ99075 208 aa12.85□□□□□ -0.35
HLA-DQB2-229ENST00000411527 PINK1Q9BXM7 581 aa12.85□□□□□ -0.35
HLA-DQB2-229ENST00000411527 RAB17Q9H0T7 212 aa12.85□□□□□ -0.35
HLA-DQB2-229ENST00000411527 FOLH1BQ9HBA9 442 aa12.85□□□□□ -0.35
HLA-DQB2-229ENST00000411527 PPP4R1LQ9P1A2 415 aa12.85□□□□□ -0.35
HLA-DQB2-229ENST00000411527 XPR1Q9UBH6 696 aa12.85□□□□□ -0.35
HLA-DQB2-229ENST00000411527 TRPS1Q9UHF7 1281 aa12.85□□□□□ -0.35
HLA-DQB2-229ENST00000411527 SNX6Q9UNH7 406 aa12.85□□□□□ -0.35
HLA-DQB2-229ENST00000411527 ZNF337Q9Y3M9 751 aa12.85□□□□□ -0.35
HLA-DQB2-229ENST00000411527 SEC14L5O43304 696 aa12.84□□□□□ -0.35
HLA-DQB2-229ENST00000411527 SCO2O43819 266 aa12.84□□□□□ -0.35
HLA-DQB2-229ENST00000411527 TNFRSF21O75509 655 aa12.84□□□□□ -0.35
HLA-DQB2-229ENST00000411527 CNOT4O95628 575 aaKnown RBP12.84□□□□□ -0.35
HLA-DQB2-229ENST00000411527 OTCP00480 354 aa12.84□□□□□ -0.35
HLA-DQB2-229ENST00000411527 TBXA2RP21731 343 aa12.84□□□□□ -0.35
HLA-DQB2-229ENST00000411527 LOXP28300 417 aaPredicted RBP12.84□□□□□ -0.35
HLA-DQB2-229ENST00000411527 CDH13P55290 713 aa12.84□□□□□ -0.35
HLA-DQB2-229ENST00000411527 MRPS22P82650 360 aaKnown RBP12.84□□□□□ -0.35
HLA-DQB2-229ENST00000411527 RAET1LQ5VY80 246 aa12.84□□□□□ -0.35
HLA-DQB2-229ENST00000411527 LETMD1Q6P1Q0 360 aa12.84□□□□□ -0.35
HLA-DQB2-229ENST00000411527 PLEKHM3Q6ZWE6 761 aa12.84□□□□□ -0.35
HLA-DQB2-229ENST00000411527 OR4N2Q8NGD1 307 aa12.84□□□□□ -0.35
HLA-DQB2-229ENST00000411527 RNF138Q8WVD3 245 aa12.84□□□□□ -0.35
HLA-DQB2-229ENST00000411527 EXOSC8Q96B26 276 aaKnown RBP12.84□□□□□ -0.35
HLA-DQB2-229ENST00000411527 ERP27Q96DN0 273 aa12.84□□□□□ -0.35
HLA-DQB2-229ENST00000411527 VSTM2LQ96N03 204 aa12.84□□□□□ -0.35
HLA-DQB2-229ENST00000411527 GSX2Q9BZM3 304 aa12.84□□□□□ -0.35
HLA-DQB2-229ENST00000411527 KLHL4Q9C0H6 718 aa12.84□□□□□ -0.35
HLA-DQB2-229ENST00000411527 MED11Q9P086 117 aa12.84□□□□□ -0.35
HLA-DQB2-229ENST00000411527 VPS29Q9UBQ0 182 aa12.84□□□□□ -0.35
HLA-DQB2-229ENST00000411527 OR10H1Q9Y4A9 318 aa12.84□□□□□ -0.35
HLA-DQB2-229ENST00000411527 HIVEP2P31629 2446 aa12.83□□□□□ -0.35
HLA-DQB2-229ENST00000411527 FBN3Q75N90 2809 aa12.83□□□□□ -0.36
HLA-DQB2-229ENST00000411527 OR4F21O95013 312 aa12.83□□□□□ -0.36
HLA-DQB2-229ENST00000411527 IL3P08700 152 aa12.83□□□□□ -0.36
HLA-DQB2-229ENST00000411527 RPS17P08708 135 aaKnown RBP12.83□□□□□ -0.36
HLA-DQB2-229ENST00000411527 CTAGE8P0CG41 777 aa12.83□□□□□ -0.36
HLA-DQB2-229ENST00000411527 CD8BP10966 210 aa12.83□□□□□ -0.36
HLA-DQB2-229ENST00000411527 PTH2RP49190 550 aa12.83□□□□□ -0.36
HLA-DQB2-229ENST00000411527 PSPHP78330 225 aa12.83□□□□□ -0.36
HLA-DQB2-229ENST00000411527 CTAGE4Q8IX94 777 aa12.83□□□□□ -0.36
HLA-DQB2-229ENST00000411527 FADS6Q8N9I5 356 aa12.83□□□□□ -0.36
HLA-DQB2-229ENST00000411527 OR2M3Q8NG83 312 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms