RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 PGAM1P18669 254 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 CA4P22748 312 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 SSTR1P30872 391 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 LMAN1P49257 510 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 ZNF140P52738 457 aaPredicted RBP3.88□□□□□ -1.79
CLK1-203ENST00000409769 THOP1P52888 689 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 STARD6P59095 220 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 ST8SIA6P61647 398 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 CRADDP78560 199 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 ACVR1Q04771 509 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 BCL2L1Q07817 233 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 PNRC1Q12796 327 aaPredicted RBP3.88□□□□□ -1.79
CLK1-203ENST00000409769 RALGDSQ12967 914 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 ELAVL3Q14576 367 aaKnown RBP3.88□□□□□ -1.79
CLK1-203ENST00000409769 E2F5Q15329 346 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 MLF2Q15773 248 aaPredicted RBP3.88□□□□□ -1.79
CLK1-203ENST00000409769 KYNUQ16719 465 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 TMEM30BQ3MIR4 351 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 DNAJC21Q5F1R6 531 aaKnown RBP3.88□□□□□ -1.79
CLK1-203ENST00000409769 ARMC12Q5T9G4 340 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 GRTP1Q5TC63 336 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 TRPT1Q86TN4 253 aaKnown RBP3.88□□□□□ -1.79
CLK1-203ENST00000409769 LDB1Q86U70 411 aaPredicted RBP3.88□□□□□ -1.79
CLK1-203ENST00000409769 APLFQ8IW19 511 aaPredicted RBP3.88□□□□□ -1.79
CLK1-203ENST00000409769 STK40Q8N2I9 435 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 TTC30BQ8N4P2 665 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 LPCAT1Q8NF37 534 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 OR13J1Q8NGT2 312 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 BRSK1Q8TDC3 778 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 PYROXD1Q8WU10 500 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 FCAMRQ8WWV6 532 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 TMEM190Q8WZ59 177 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 FAM3CQ92520 227 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 RSRC1Q96IZ7 334 aaKnown RBP3.88□□□□□ -1.79
CLK1-203ENST00000409769 TTC25Q96NG3 672 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 ZNF582Q96NG8 517 aaPredicted RBP3.88□□□□□ -1.79
CLK1-203ENST00000409769 SMIM14Q96QK8 99 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 EBNA1BP2Q99848 306 aaKnown RBP3.88□□□□□ -1.79
CLK1-203ENST00000409769 C19orf43Q9BQ61 176 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 TMEM109Q9BVC6 243 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 KRTAP4-4Q9BYR3 166 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 IL22Q9GZX6 179 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 GFRA4Q9GZZ7 299 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 RSPH9Q9H1X1 276 aaPredicted RBP3.88□□□□□ -1.79
CLK1-203ENST00000409769 ZDHHC6Q9H6R6 413 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 VIPAS39Q9H9C1 493 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 CHMP1AQ9HD42 196 aaPredicted RBP3.88□□□□□ -1.79
CLK1-203ENST00000409769 ZDHHC4Q9NPG8 344 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 COQ3Q9NZJ6 369 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 NPAP1Q9NZP6 1156 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 BFARQ9NZS9 450 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 SUN2Q9UH99 717 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 IL36AQ9UHA7 158 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 PLA2G4CQ9UP65 541 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 CHMP2BQ9UQN3 213 aa3.88□□□□□ -1.79
CLK1-203ENST00000409769 ZFC3H1O60293 1989 aaKnown RBP3.87□□□□□ -1.79
CLK1-203ENST00000409769 A0A087WUV0 522 aaPredicted RBP3.87□□□□□ -1.79
CLK1-203ENST00000409769 LOC102723996A0A087X1L8 192 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 A0A1B0GVY2 172 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 TCRBV9S1A1TA0A576 114 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 FAM159BA6NKW6 160 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 MAGEB17A8MXT2 336 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 H7C0S8 307 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 GAPDHSO14556 408 aaPredicted RBP3.87□□□□□ -1.79
CLK1-203ENST00000409769 ADAMDEC1O15204 470 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 ACSL3O95573 720 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 KLF8O95600 359 aaPredicted RBP3.87□□□□□ -1.79
CLK1-203ENST00000409769 SHBGP04278 402 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 UGT2B4P06133 528 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 TPOP07202 933 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 ALPIP09923 528 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 VPREB1P12018 145 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 CBLP22681 906 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 LHCGRP22888 699 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 GCAP28676 217 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 EPHA2P29317 976 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 GCH1P30793 250 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 DRD3P35462 400 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 HMGCLP35914 325 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 METAP1P53582 386 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 RAD51Q06609 339 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 POU6F1Q14863 301 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 RASA2Q15283 850 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 TAF1AQ15573 450 aaPredicted RBP3.87□□□□□ -1.79
CLK1-203ENST00000409769 NTRK2Q16620 822 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 UGP2Q16851 508 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 ANKRD20A4Q4UJ75 823 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 TNFAIP8L3Q5GJ75 292 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 SPANXN3Q5MJ09 141 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 PIP5KL1Q5T9C9 394 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 ALS2CLQ60I27 953 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 RBMS3Q6XE24 437 aaKnown RBP3.87□□□□□ -1.79
CLK1-203ENST00000409769 C3orf62Q6ZUJ4 267 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 NLRP9Q7RTR0 991 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 KBTBD6Q86V97 674 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 CNTN4Q8IWV2 1026 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 RYBPQ8N488 228 aaPredicted RBP3.87□□□□□ -1.79
CLK1-203ENST00000409769 CPSF7Q8N684 471 aaKnown RBP3.87□□□□□ -1.79
CLK1-203ENST00000409769 DNAAF3Q8N9W5 541 aa3.87□□□□□ -1.79
CLK1-203ENST00000409769 PPFIBP2Q8ND30 876 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms