RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 OR10H1Q9Y4A9 318 aa13.26□□□□□ -0.29
NIF3L1-205ENST00000409588 CACNA1CQ13936 2221 aa13.25□□□□□ -0.29
NIF3L1-205ENST00000409588 LINC01387J3KSC0 135 aa13.25□□□□□ -0.29
NIF3L1-205ENST00000409588 GNB5O14775 395 aa13.25□□□□□ -0.29
NIF3L1-205ENST00000409588 LRATO95237 230 aa13.25□□□□□ -0.29
NIF3L1-205ENST00000409588 TUBBP07437 444 aa13.25□□□□□ -0.29
NIF3L1-205ENST00000409588 SRD5A2P31213 254 aa13.25□□□□□ -0.29
NIF3L1-205ENST00000409588 RPL3P39023 403 aaKnown RBP13.25□□□□□ -0.29
NIF3L1-205ENST00000409588 PTGDSP41222 190 aa13.25□□□□□ -0.29
NIF3L1-205ENST00000409588 PSG6Q00889 435 aa13.25□□□□□ -0.29
NIF3L1-205ENST00000409588 RCAN2Q14206 197 aa13.25□□□□□ -0.29
NIF3L1-205ENST00000409588 PCLAFQ15004 111 aa13.25□□□□□ -0.29
NIF3L1-205ENST00000409588 NNATQ16517 81 aa13.25□□□□□ -0.29
NIF3L1-205ENST00000409588 DECR1Q16698 335 aa13.25□□□□□ -0.29
NIF3L1-205ENST00000409588 VPS26BQ4G0F5 336 aa13.25□□□□□ -0.29
NIF3L1-205ENST00000409588 LRIG3Q6UXM1 1119 aa13.25□□□□□ -0.29
NIF3L1-205ENST00000409588 Q6ZSR9 355 aa13.25□□□□□ -0.29
NIF3L1-205ENST00000409588 R3HCC1LQ7Z5L2 792 aaKnown RBP13.25□□□□□ -0.29
NIF3L1-205ENST00000409588 SLC44A2Q8IWA5 706 aaPredicted RBP13.25□□□□□ -0.29
NIF3L1-205ENST00000409588 NATD1Q8N6N6 113 aa13.25□□□□□ -0.29
NIF3L1-205ENST00000409588 WDSUB1Q8N9V3 476 aa13.25□□□□□ -0.29
NIF3L1-205ENST00000409588 SIMC1Q8NDZ2 872 aa13.25□□□□□ -0.29
NIF3L1-205ENST00000409588 FAM83FQ8NEG4 500 aaPredicted RBP13.25□□□□□ -0.29
NIF3L1-205ENST00000409588 ZFP28Q8NHY6 868 aa13.25□□□□□ -0.29
NIF3L1-205ENST00000409588 RNF138Q8WVD3 245 aa13.25□□□□□ -0.29
NIF3L1-205ENST00000409588 CAVIN3Q969G5 261 aa13.25□□□□□ -0.29
NIF3L1-205ENST00000409588 ZBED6CLQ96FA7 236 aaPredicted RBP13.25□□□□□ -0.29
NIF3L1-205ENST00000409588 FCRL1Q96LA6 429 aa13.25□□□□□ -0.29
NIF3L1-205ENST00000409588 ZFP3Q96NJ6 502 aa13.25□□□□□ -0.29
NIF3L1-205ENST00000409588 AMDHD1Q96NU7 426 aa13.25□□□□□ -0.29
NIF3L1-205ENST00000409588 UCN2Q96RP3 112 aa13.25□□□□□ -0.29
NIF3L1-205ENST00000409588 OR2B2Q9GZK3 357 aa13.25□□□□□ -0.29
NIF3L1-205ENST00000409588 Q9N2J8 555 aa13.25□□□□□ -0.29
NIF3L1-205ENST00000409588 DDX18Q9NVP1 670 aaKnown RBP13.25□□□□□ -0.29
NIF3L1-205ENST00000409588 ABCG2Q9UNQ0 655 aa13.25□□□□□ -0.29
NIF3L1-205ENST00000409588 TRAF6Q9Y4K3 522 aa13.25□□□□□ -0.29
NIF3L1-205ENST00000409588 POLR3HQ9Y535 204 aaPredicted RBP13.25□□□□□ -0.29
NIF3L1-205ENST00000409588 WIF1Q9Y5W5 379 aa13.25□□□□□ -0.29
NIF3L1-205ENST00000409588 NKX2-6A6NCS4 301 aa13.24□□□□□ -0.29
NIF3L1-205ENST00000409588 FAM90A27PA6NNH2 459 aa13.24□□□□□ -0.29
NIF3L1-205ENST00000409588 TMEM114B3SHH9 223 aa13.24□□□□□ -0.29
NIF3L1-205ENST00000409588 UPK1AO00322 258 aa13.24□□□□□ -0.29
NIF3L1-205ENST00000409588 SNUPNO95149 360 aaKnown RBP13.24□□□□□ -0.29
NIF3L1-205ENST00000409588 PSMG1O95456 288 aa13.24□□□□□ -0.29
NIF3L1-205ENST00000409588 IL18BPO95998 194 aa13.24□□□□□ -0.29
NIF3L1-205ENST00000409588 JUNP05412 331 aaKnown RBP13.24□□□□□ -0.29
NIF3L1-205ENST00000409588 CHMP24386 653 aa13.24□□□□□ -0.29
NIF3L1-205ENST00000409588 MAPK1P28482 360 aa13.24□□□□□ -0.29
NIF3L1-205ENST00000409588 OPRM1P35372 400 aa13.24□□□□□ -0.29
NIF3L1-205ENST00000409588 ADH7P40394 386 aa13.24□□□□□ -0.29
NIF3L1-205ENST00000409588 CORO7P57737 925 aa13.24□□□□□ -0.29
NIF3L1-205ENST00000409588 VSNL1P62760 191 aa13.24□□□□□ -0.29
NIF3L1-205ENST00000409588 TLE4Q04727 773 aa13.24□□□□□ -0.29
NIF3L1-205ENST00000409588 BCL2A1Q16548 175 aa13.24□□□□□ -0.29
NIF3L1-205ENST00000409588 FBXL19-AS1Q494R0 122 aa13.24□□□□□ -0.29
NIF3L1-205ENST00000409588 ACSF3Q4G176 576 aaPredicted RBP13.24□□□□□ -0.29
NIF3L1-205ENST00000409588 WIPI1Q5MNZ9 446 aaPredicted RBP13.24□□□□□ -0.29
NIF3L1-205ENST00000409588 SWT1Q5T5J6 900 aaKnown RBP13.24□□□□□ -0.29
NIF3L1-205ENST00000409588 KANK2Q63ZY3 851 aa13.24□□□□□ -0.29
NIF3L1-205ENST00000409588 CLEC6AQ6EIG7 209 aa13.24□□□□□ -0.29
NIF3L1-205ENST00000409588 ZCCHC12Q6PEW1 402 aa13.24□□□□□ -0.29
NIF3L1-205ENST00000409588 OR14L1PQ8NHC6 308 aa13.24□□□□□ -0.29
NIF3L1-205ENST00000409588 GOT1L1Q8NHS2 421 aaPredicted RBP13.24□□□□□ -0.29
NIF3L1-205ENST00000409588 CDC26Q8NHZ8 85 aa13.24□□□□□ -0.29
NIF3L1-205ENST00000409588 WDYHV1Q96HA8 205 aa13.24□□□□□ -0.29
NIF3L1-205ENST00000409588 UGT2B28Q9BY64 529 aa13.24□□□□□ -0.29
NIF3L1-205ENST00000409588 ACBD3Q9H3P7 528 aa13.24□□□□□ -0.29
NIF3L1-205ENST00000409588 GLIPR2Q9H4G4 154 aa13.24□□□□□ -0.29
NIF3L1-205ENST00000409588 REEP4Q9H6H4 257 aa13.24□□□□□ -0.29
NIF3L1-205ENST00000409588 NPDC1Q9NQX5 325 aaPredicted RBP13.24□□□□□ -0.29
NIF3L1-205ENST00000409588 ACSS1Q9NUB1 689 aaPredicted RBP13.24□□□□□ -0.29
NIF3L1-205ENST00000409588 NTMQ9P121 344 aa13.24□□□□□ -0.29
NIF3L1-205ENST00000409588 CBLCQ9ULV8 474 aa13.24□□□□□ -0.29
NIF3L1-205ENST00000409588 DNAJC15Q9Y5T4 150 aa13.24□□□□□ -0.29
NIF3L1-205ENST00000409588 MBD3L4A6NDZ8 208 aaPredicted RBP13.23□□□□□ -0.29
NIF3L1-205ENST00000409588 MBD3L3A6NE82 208 aaPredicted RBP13.23□□□□□ -0.29
NIF3L1-205ENST00000409588 MBD3L5A6NJ08 208 aaPredicted RBP13.23□□□□□ -0.29
NIF3L1-205ENST00000409588 SLU7O95391 586 aaKnown RBP13.23□□□□□ -0.29
NIF3L1-205ENST00000409588 PRPS2P11908 318 aa13.23□□□□□ -0.29
NIF3L1-205ENST00000409588 CYP4B1P13584 511 aa13.23□□□□□ -0.29
NIF3L1-205ENST00000409588 ALDH3A1P30838 453 aa13.23□□□□□ -0.29
NIF3L1-205ENST00000409588 DSCR4P56555 118 aaPredicted RBP13.23□□□□□ -0.29
NIF3L1-205ENST00000409588 GANABQ14697 944 aaKnown RBP13.23□□□□□ -0.29
NIF3L1-205ENST00000409588 MLC1Q15049 377 aa13.23□□□□□ -0.29
NIF3L1-205ENST00000409588 RFTN2Q52LD8 501 aaPredicted RBP13.23□□□□□ -0.29
NIF3L1-205ENST00000409588 EIPR1Q53HC9 387 aa13.23□□□□□ -0.29
NIF3L1-205ENST00000409588 ARL13AQ5H913 290 aaPredicted RBP13.23□□□□□ -0.29
NIF3L1-205ENST00000409588 CROCCP2Q86T23 111 aa13.23□□□□□ -0.29
NIF3L1-205ENST00000409588 IFNEQ86WN2 208 aa13.23□□□□□ -0.29
NIF3L1-205ENST00000409588 MREGQ8N565 214 aa13.23□□□□□ -0.29
NIF3L1-205ENST00000409588 MBD3L2Q8NHZ7 208 aaPredicted RBP13.23□□□□□ -0.29
NIF3L1-205ENST00000409588 AENQ8WTP8 325 aaKnown RBP13.23□□□□□ -0.29
NIF3L1-205ENST00000409588 PPP3R2Q96LZ3 170 aa13.23□□□□□ -0.29
NIF3L1-205ENST00000409588 FAM111AQ96PZ2 611 aa13.23□□□□□ -0.29
NIF3L1-205ENST00000409588 TM9SF2Q99805 663 aa13.23□□□□□ -0.29
NIF3L1-205ENST00000409588 ZNF559Q9BR84 538 aa13.23□□□□□ -0.29
NIF3L1-205ENST00000409588 LMF2Q9BU23 707 aaKnown RBP13.23□□□□□ -0.29
NIF3L1-205ENST00000409588 PTGES2Q9H7Z7 377 aa13.23□□□□□ -0.29
NIF3L1-205ENST00000409588 GALNT9Q9HCQ5 603 aa13.23□□□□□ -0.29
NIF3L1-205ENST00000409588 TAS2R10Q9NYW0 307 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms